Alteromonas mediterranea DE: MADE_1007860
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Entry
MADE_1007860 CDS
T00747
Name
(GenBank) diguanylate cyclase
KO
K18765
RNase E specificity factor CsrD
Organism
amc
Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:
amc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amc03019
]
MADE_1007860
Messenger RNA biogenesis [BR:
amc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MADE_1007860
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
LapD_MoxY_N
DUF4407
Motif
Other DBs
NCBI-ProteinID:
AEA97712
UniProt:
F2G8E3
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All DBs
Position
complement(1695318..1697252)
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AA seq
644 aa
AA seq
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MKLTNQTNWGIVALLFLAFTALSVAELRELQLNTSEAVTLQAEKSAANYRKNIDQLSSLS
PQTEELVLSTLLESTVSQPHISYAAIVDASGSVVAKREAAVQNAVPSWFTSIDSNSELEK
RVPLGDSQRALVLTSNKVEVYTRFTNVLLRNIIAFVALSLLVSLLVAVMNRRFKRPIEDT
VRKLNDMGSHNFTSPQVSASSGDCEQLTSTVNTLSSTLASKFDELTRQSELFKKEASKDS
LTKLANRGAFERHMRALLNENATSQEKELIIVRLAQLASINTKLGMVPGDNYVKAIANIL
VEETKNNSNVRFVFRLTGGDFALICEAMEKPVRDLMLTNISKQCASASPLRDGTKATYIG
ITRFTGTMSMPQVMESVDSALIAAMKTQSGWELASEISHVHSNTRWRERLNYIVAQQYAD
IMIQPVMNIEQNIPAYYETFGRFKDKDTNEVIPMSQLIPASERLDLIPQVDRLVTSIVFK
KMEVTSQQVAVNLSITSIANGEFRAWLVNELTQRQALCPRLLFEVEDAALIQYRDYAESL
CRQLINLGCRVTIEHFGDHFASLSGLRAIKPQFVKISGRLTQGIHTNKENQLFVSSLINI
ATGLNIKVIAEMVETEAESVALNKLGVEHQQGYYFAKPALWNVY
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaactaatcaaactaattggggtattgttgcccttttgtttttagcgtttact
gcattgtctgtcgccgaactacgtgagttacaattaaacacgtctgaggcggtcacgcta
caggctgaaaaaagcgcggcaaattatagaaaaaacattgatcagctctcctctctgtca
ccgcagacagaggagctagtccttagcacccttctagaaagtacagtatcgcagccccat
atatcttacgccgcaattgttgacgcaagcggtagtgtggtagccaaaagagaagcggca
gttcagaacgctgtaccatcgtggttcacgtcaatcgattccaattcagaattggaaaaa
cgcgtacctttaggtgatagtcagcgcgcgctcgtactcacatcaaataaggttgaggta
tacaccaggttcactaacgtactactaaggaatattatcgcctttgtcgcgctttcactg
cttgtttcattgttggttgcagtaatgaatcgacgatttaagcgacctatcgaagatacc
gttagaaaacttaacgacatggggagccataatttcacgtcaccccaagtgagtgcctct
tctggcgactgtgaacagttgacaagtaccgttaataccctttcaagcacgctagcctcg
aagttcgatgaacttacacgccagtctgagctatttaaaaaagaagcgagcaaagattca
ctaactaaactagccaacagaggggcgtttgagcgccacatgcgtgcgctattaaacgaa
aacgcaacctcacaagaaaaagagcttattattgtacggctagcgcaactggccagtatt
aataccaagttaggtatggtgccgggtgataactatgttaaagcgatagcgaacatcttg
gttgaagaaaccaaaaacaacagtaacgtgcgctttgtgtttcgattgactggcggagat
ttcgcattaatttgcgaggccatggaaaagccagtaagagatctcatgctgactaacata
tcaaaacaatgcgctagcgcctcgccattacgcgatggcaccaaagccacgtatatcggt
attactcgctttaccggcactatgtctatgccgcaagtcatggaaagtgtggatagtgcg
cttatcgctgccatgaaaacccaaagcggttgggagttggcctcggaaatatctcacgta
cacagcaatacgcgatggcgcgaacgacttaactatattgtcgctcagcagtatgccgac
attatgattcagccggttatgaatatagagcaaaatattcccgcttactatgagacattt
gggcgctttaaagacaaagataccaacgaagtcatacccatgtcgcagcttatccctgct
tctgagcgattagacctaataccacaagtcgacagactggttaccagcatcgtgtttaaa
aagatggaagtgacctctcagcaagtcgccgtcaatttaagtattacgtcaattgccaat
ggtgaatttagagcttggttggttaacgaattaacccagcgacaagcgctgtgccctagg
cttcttttcgaagttgaagatgccgcgctaatacagtatcgagactacgcggaatcgctg
tgcagacaattgatcaacctgggttgtcgagtcactattgaacactttggcgatcacttt
gcatccctctctggcctacgcgcgattaaaccgcagtttgttaaaatttccggaagactg
acccaaggtattcataccaataaagaaaaccagctgttcgtgtctagccttatcaatata
gcgactggcctgaatataaaagtaattgcagaaatggtggaaaccgaagccgaatctgtg
gctttgaacaagctaggtgtagaacatcagcaaggctattattttgctaaacctgcactt
tggaatgtgtattaa
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