Amycolatopsis mediterranei U32: AMED_4023
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Entry
AMED_4023 CDS
T01269
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00300
Lysine biosynthesis
amd00470
D-Amino acid metabolism
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01120
Microbial metabolism in diverse environments
amd01230
Biosynthesis of amino acids
Module
amd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMED_4023 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMED_4023 (lysA)
Enzymes [BR:
amd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AMED_4023 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADJ45800
UniProt:
A0A0H3D4B1
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All DBs
Position
4396262..4397557
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AA seq
431 aa
AA seq
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MSVEFEISGVGIAELAERYGTPLFVYDGDELGGRLLGLREQLHPRLEIFYSLKANPNISV
CALLHAHGARAEVSSMAELITARRAGVAGEDIIFLGPGKSTSELAACLDEGVYTVVCESF
GELKILDELARERGIEARVALRVNPSFAVKGSGLTMGGKPRQFGIDEEQLLAATDLVDRH
PNLRLMGVQVYMGTRILDEEPIVENTRRIFELAERVSRRLGFPLDMVDVGGGLGVAYFDG
ERDLDRDLLASLLNPVIDEFAQRHPATRLVMELGRYLAATSGTYVVRVRYTKTSLGQNFA
VADGGTNHHMAAVGIGSYVKRDFPIRLLNRIDEPATETWQVTGPLCTPNDVLAKKAALPP
VRPGDLVGVTRSGAYGPTASPVLFLSHGYPAEVIVHCGRHYLVSERDEPADLLRRQHLHE
FAPPVAVGAER
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgaattcgagatctccggcgtcggcatcgccgaactcgcggagcgttacggc
accccgctcttcgtctacgacggtgacgaactgggcggccggctgctgggtctccgtgag
cagctgcacccgcggctggagatcttctattcgctcaaggccaatccgaacatctcggtg
tgcgcgctgctgcacgcccacggtgcccgggccgaagtctcgtcgatggccgaactgatc
accgcgcgccgggccggcgtcgccggcgaggacatcatcttcctcggccccggcaagagc
acctcggaactggccgcgtgcctggacgaaggcgtctacaccgtcgtctgcgaatcgttc
ggcgagctgaagatcctcgacgagctcgcgcgcgaacgcgggatcgaagcgcgggtcgcg
ctgcgcgtgaaccccagcttcgcggtcaagggctcgggcctcaccatgggcggcaagcca
cgccagttcggcatcgacgaagaacagctgctcgccgccaccgacctcgtcgaccggcac
ccgaacctgcggctgatgggcgtgcaggtctacatgggcacccggatcctcgacgaggag
ccgatcgtcgaaaacacgcggcgcatcttcgagctcgccgaacgcgtctcgcgccggttg
ggcttcccgctggacatggtcgacgtcggcggcggcctcggggtcgcgtacttcgacggc
gaacgggacctcgaccgcgatctgctcgcttcgctgctcaacccggtgatcgacgagttc
gcgcagcggcacccggcgacccggctggtcatggagctcggccggtacctggccgccact
tccgggacctacgtcgtccgcgtccgctacacgaagacctcgctggggcagaacttcgcc
gtcgccgacggtggtacgaaccaccacatggccgccgtcggcatcgggtcctacgtcaag
cgcgacttcccgatccggctgctcaaccgcatcgacgaacccgccaccgaaacctggcag
gtgaccggtccgctgtgcacgcccaacgacgtgctcgcgaagaaggccgcgctgccgccg
gtccgcccgggcgacctggtcggcgtcacgcggtccggtgcctacggcccgacggcgtca
ccggtgctgttcctcagccacggctacccggccgaagtcatcgtccactgtggacggcac
tacctcgtcagcgagcgggacgagcccgcggacctgctgcgccgccagcacctgcacgag
ttcgcgccgccggtcgccgtgggcgcggagcgctag
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