Apis mellifera (honey bee): 412371
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Entry
412371 CDS
T01057
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X3
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ame
Apis mellifera (honey bee)
Pathway
ame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
412371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ame03019
]
412371
Messenger RNA biogenesis [BR:
ame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
412371
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
412371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
412371
NCBI-ProteinID:
XP_006565557
BEEBASE:
GB42495
UniProt:
A0A7M7GSW2
LinkDB
All DBs
Position
LG7:11000069..11009570
Genome browser
AA seq
2402 aa
AA seq
DB search
MNLDSLSFTLSQISYLVANLNKKNFRDSCQEISVLVQWKGLEADRHLLRSLLSCIDFSTG
EPPESSAKDYFQVQLLKQECTNLLSKPSFISNLCFAIDHPFHQQKTLNPSPKFFLRLKKV
LGLTLVQEVAFAIALLHSENTEIRTLALEHIQKQLPELIKNYINSETSNRHHEEGLHDSL
PEVLHLILSQAFHSANQFGLLSEAKEKFLKNLRRDFPRELVPVVLAPLLYPDNGETPQTK
IELNMAVNQMDGNSLVELIMELGYGFTSSVEECRSALAGLGAREISPACAARVLAHMARS
CNNLDDAGGLQSFWSNSGATQDANKEKSNDSSAPSTWNIEVFVQALKEIQSTLSWNEVIV
KLDHAEFIIKDRQGLNLLITGLRLGLQHQGYPPDMFPVELFYRHWDNVEGQFSLVQQILK
CPDIFCFADYPYHSVTVDVLKAAPESDSKEAQTWRSLNVVELLLHMAERGLYGPVQEIFK
WPIQHCPDVLVLALLQINAPITLLRQELLSTLMPIFLGNHPNSAVILHHAWHGNTVKIKS
IIMHAMAEWYIRGDHDQTRLSRILDVAQDLKALTHLLTAQSYPFVIDLACLASRREYLKL
EKWLTDKIREQGEVFVTACVKFLQRRCPQVMGPGIKEDLTVPKASQLPQETLTTMLACLQ
VCAGSVSQECSEAIMTMVQNCSLMLSKSTMSRPPPPGVLRHRGLEPFNPATLGGQLFSSK
QVDPLGNLSSSLASMGLSSSLGPPSSSAFNLPGALGPLVSAPGSPSRLMGPSPSPFPMLP
LSSQLHSGPVGTQGPSVLPGSTTIGGLGRLGPPTGIEKARIPETSNLFPDMAQNVSKEIE
DEANSYFQRIYNHPPHPTLSIDEVLDMLKKFQDSGSKREREVFNCMLRNLFEEYRFFPQY
PDKELQITAQLFGGIIERGLINSYMTLGLALRFVLDALRKPEGSKMYYFGITALDRFKSR
LKDYQTYCEHVRAIQHFSEFPPHLIEYIEYGLQGQEPPTRPQGPVLPKTLAAMLAPVTTP
YKTITTTTITTSTTQAKSSTTPTTSLSARPSIANATNIDTLLVATDKEEKITTPPEALQD
KTAFIFNNLSQLNLQQKCDEIREIVTEEYWPWMAQYLVMKRASIELNFHALYSNFLDCLK
SPEVYKMVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILHIDIDL
KSLLVEAYHKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKL
NLKFEIEVLCKNLSIDVGELKPALYLKDPEKLRNLEYQLSHPNKKSESNNNQQQSQGPIE
ELVGPTTTGTIVPQTAPANTTPSLPTGPPEPRFNYMDISVTGIANISQHITINNNLPLFQ
THPHLKQFVRPAVERAIQEWIHPVVDRSIKIALTTSEQIVRKDFALDPEEVRMRTAARHM
VRNLTAGMAMITCRDQVLASISTNLKQAFLTAMMGTTPQQKELAEQAANVVAADNMELAC
AFVQKTAIEKAIPEMDKRLLNEIELRKIARQEGRRYCDPLAKYQAERMPEQIRLKVGGVT
PQQMAVYEEFARNIPGFLPLSERDTQALLMPKPVTEPAVTAFAANPAVAVATAQQVAAYA
AAVSNDEVGAMLEKLATEVEVLLAAMGPAAPPPQHAALHSLLESIILTRRSRDAGAAMAL
LKKAVEGLLDGPTISSGVIDSEIILRYRELHLRILKCLQDPRAYGMQWTNKHVTRCLTEC
REEFRYNFEAVDYLIRSHLISLPQYDLALAQAIDSGNAMATAFAMQLMQLYLIDERQTTH
VTESDLCNTIEILARIAHHRAPPEGILLFRLTSLMESLRANHDPAVLADRAPAGPTAHIH
SGILQVRARDFDDPPGLMEKTEYLLREWVSMHHNPTHARDPTKAFGMFVHQMNIHGILKT
DDLITRFFKLSTQMCVDLCYRALAETNAAPSVVRAKCFHSLDAFVRLVALLVKHSGDSTN
THTKINLLNKVLGIVAGVLLQDHEIRGTDFHQLPYHRIFIMLFLELCAPEPVLEAVNYQV
LTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGRMLAITPQQKCWGMYAQLLIDLFKYL
APYLRNAELAKPVTLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMKNLILSA
YPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFASMIQPLSFKKELDSYLKARAPVTFLS
ELRSNLQVSQEAGVRYNIQLMNALVLYVGTQAIAFIRSKGHTPNMSTIAHSAHMDIFQNL
AVDLDTEGRYLFVNAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIV
NRPHPWGLLITFVELIKNPTYKFWTHEFVHCAPEIEKLFESIARSCMVQKQVQPTPEPEI
PE
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttactttgtcacaaatcagttatttggttgcgaattta
aataagaaaaattttcgggacagctgccaagaaatatcagttctggtgcagtggaagggt
ttggaggcagacagacatttgctgcgctctttactctcgtgcatcgacttttcaacagga
gaacctccagaatcaagtgcaaaagattattttcaagtgcaacttctaaaacaagagtgt
actaatcttcttagcaaaccttcttttatttctaatctgtgctttgctatagatcatcca
tttcatcaacaaaagactttgaatccatcaccaaagttttttttacgtttaaaaaaggta
cttggcttaactctagtacaagaagttgcatttgcaattgcattgctgcattctgagaat
actgaaattcgtacattagctttagaacacatacaaaaacagctgcctgaattgataaaa
aattacattaattctgagacaagcaatagacatcacgaagaaggattgcacgattcattg
cctgaagttcttcatcttatattatctcaggcttttcattcagccaatcaatttggcctt
ttatctgaagcaaaagaaaaatttctcaagaatttaaggcgcgattttccccgtgaactg
gtaccagtggtgctagcaccactcttgtacccagataacggggaaactccgcaaactaaa
atcgaactaaacatggctgttaaccaaatggatgggaattctctagtagaattgattatg
gaattaggatatggatttactagtagtgttgaagaatgtcgttcagctttagctggctta
ggagctcgagaaatttctccagcatgtgcagctagagttttagctcatatggcacgtagc
tgtaataatcttgatgatgctggaggattacaatcattttggagtaattctggagctaca
caagatgcaaataaggagaaatcaaatgatagttctgctccttctacatggaatattgaa
gtttttgttcaagcattaaaagaaattcaatcaacattatcctggaatgaagtaatagtt
aaattagatcatgcagaattcattattaaagatagacaaggattaaatttattaatcaca
ggattaaggttgggcctgcaacatcaaggatatcctccagatatgtttcctgtagaactt
ttttatcgtcattgggacaatgtagaaggacagttttctctagtacaacaaattttaaag
tgtcctgatatattttgctttgctgattatccatatcattctgtaactgttgatgtatta
aaagcagcgccagaaagtgatagtaaagaagcacaaacttggagatctttaaatgtagtt
gaattactcttgcatatggcagaaagaggattatatggaccagttcaagaaatatttaag
tggcccattcaacactgccctgatgttcttgtattggcattattacagattaatgctcct
attactttactcagacaagaattacttagtacattgatgcctatttttctgggaaatcat
ccaaactcagctgttattctacatcacgcgtggcatggaaatacagttaaaataaaatct
attattatgcatgctatggcggaatggtatatacgtggagatcatgatcaaacaagatta
tctcgtattcttgatgttgctcaagatcttaaagcattaactcatttattgactgctcaa
tcatatccatttgttattgacttagcttgtttagcttcaagaagagaatatttaaaatta
gaaaaatggttgacagataaaattagagaacaaggagaagtatttgttactgcgtgtgta
aaatttttacaaagacgttgtcctcaagtaatgggacctggtataaaagaagatcttact
gtaccaaaagcaagtcaacttcctcaagaaacattaacaacaatgcttgcttgcttgcaa
gtgtgtgctggtagtgtatctcaagaatgttcagaggcaataatgacaatggtacaaaat
tgtagtctaatgttgagtaaaagtacaatgagtagacctcctccaccaggagttttacga
catcgtggattggaaccttttaatccagcaactttgggaggacagttgttttcttcaaaa
caagtggatccacttggaaatttaagttcaagtcttgcatctatgggtttgagttccagt
cttggtccaccaagtagttctgcatttaatttaccaggtgctcttggacctttagtatca
gcacctggttctccttcccgtctcatgggaccttccccaagtccatttccgatgttacca
ttatcttcacaattacattcaggaccagttggtacacaaggaccatctgtcttacctggt
agtacaacaattggaggattaggacgacttggaccaccaacaggcattgaaaaagcaaga
atacctgaaacatcaaacttatttcctgatatggcacaaaatgtttccaaagaaattgaa
gatgaagcaaatagttactttcagcgtatatacaatcatccaccacatcctactttatca
attgatgaagttcttgatatgttaaaaaaatttcaagattctggtagtaaaagagagaga
gaagtattcaattgtatgttaagaaacttatttgaggaataccgattttttcctcaatac
ccagataaagaattacaaattacggcacaactgtttggaggaattatcgaaagagggttg
attaatagctatatgacacttggattagctttgagatttgtattggatgcacttaggaaa
ccagaaggcagcaagatgtattactttggcataacagctctggatcgtttcaagagccgt
ttaaaagactaccaaacatactgtgagcatgtcagggcaattcaacatttcagtgagttc
ccaccacatttaattgagtatatagaatatggattacaggggcaggagcctcccacgaga
cctcaaggtccagttctcccaaaaactttagcagctatgttggcaccagttactacgcca
tataaaactattacgacaacaacaataacaacaagtactactcaagcgaaatcgtctaca
actccaaccacttctctctcagctagaccttccattgctaatgcaacaaatattgataca
ttattagtagcaacagataaagaagaaaagattacgacaccaccagaagctttacaagat
aaaacagcatttatttttaataatcttagtcaactcaatttacaacaaaaatgtgatgaa
attcgggaaattgtcacagaagaatattggccttggatggctcagtatttagtaatgaaa
cgtgcaagcatagaattaaatttccatgctttatattcaaattttttagattgtttgaaa
tcgccagaagtgtataaaatggttactagagaaacatttagaaacataaaagttttattg
cgaagtgataaaggaatagcaaatttttctgatcgttcacttttaaaaaatttaggtcat
tggttgggaatgttaacccttggcagaaataaacccattttacatattgatatagattta
aagagtttacttgttgaagcatatcataaaggtcaacaagaacttctttatgttgttccc
tttgttgctaaagtactagaaagttgtgcaaaaagtcgtgtttttcgtccgcctaatcct
tggacaatggcaattatgaatgttttagcagaattgcatcaagaacctgatttaaaactt
aatttaaaatttgaaatcgaagtgttatgtaaaaatttaagtattgatgttggtgaatta
aaacctgcactttatttaaaagatccagaaaaattgcgaaatttagaatatcaattatca
catcctaataaaaaatctgaatcaaacaacaatcaacaacaatctcaaggtcctattgaa
gaattagttggacctactacaactgggactattgttccacaaacagctccagcaaataca
acaccatctttacctactggtccaccagaaccgcgttttaattatatggatatatctgta
acgggcattgccaatatttctcagcatatcaccattaataacaatttgccattattccaa
acacatccacatttaaaacagtttgttcgtccagctgttgaaagagcaattcaagaatgg
attcatcctgtagtggatagatcaatcaaaatagctctaactactagtgaacagattgtg
agaaaagattttgcattagatccagaagaagttcgtatgagaacagcagcaagacatatg
gttcgtaatttaactgctggaatggcaatgattacttgccgtgatcaagttttggcgtca
attagtacaaatctgaaacaagcttttttaactgcaatgatgggcacaactccacaacaa
aaagaacttgcagaacaagcagctaatgtagtagctgctgacaatatggaacttgcttgt
gcatttgtacaaaaaacagctattgaaaaagcaattccagaaatggacaaacgtttatta
aacgaaattgaattacgaaaaattgcacggcaagaaggaagaagatattgcgatccatta
gctaaatatcaggctgaaagaatgcctgaacaaataagattaaaagttggcggagtaact
cctcaacaaatggctgtttatgaagaatttgcgagaaatattccaggatttttaccatta
tctgaacgagatacacaagctttactaatgccaaaacctgttacagagcctgctgtaact
gcatttgctgctaatccagccgttgcagtagcaacagcgcaacaggttgctgcatatgca
gcagcagtgagtaatgatgaagttggagccatgttagaaaaacttgcaactgaagttgaa
gtactgctcgctgcaatgggtccagctgcacctcctccacaacatgctgcccttcatagt
ctcttagaatcgattatcctaacacggaggtcaagagatgcaggtgctgctatggcatta
cttaaaaaggctgtagaaggattattagatggtcctaccatttccagtggtgtaatagat
tcagaaattatattacgatatagagaacttcatttacgcattttaaaatgtcttcaagat
ccacgtgcttatggtatgcaatggacaaataaacatgttactcgatgtttaacagaatgc
agagaagagtttcgatacaattttgaagctgtcgattatcttattagatctcatttaatt
agtcttccacaatatgatttagctttggctcaagctatagattctggaaatgctatggca
acagcatttgcaatgcaattgatgcaactttatttaattgatgaaagacaaactacacat
gttactgaatctgatttatgtaatacaattgagatacttgcaagaatagctcatcataga
gcaccacctgaagggattttactatttagactgacaagtttaatggaatcattgcgtgct
aatcatgatccagcagtattagcagatagagcccctgctggtcctacagcacatattcat
tctggaattctacaggtgagagctcgtgatttcgatgatccacctggattaatggagaaa
acagaatatttattacgcgaatgggtttcaatgcatcataacccaacacacgctcgtgat
cctacaaaagcttttggaatgtttgttcatcaaatgaacattcatggaattcttaaaact
gatgatctcataacaagattctttaaattaagcactcaaatgtgcgttgatctgtgttat
cgtgctttagccgagacaaatgctgcaccatcagttgttcgtgcaaaatgtttccattcg
ttggatgcatttgttcgtttagttgcgcttttggtaaaacattctggtgatagtacaaat
actcacacaaaaattaatttactaaacaaggttttgggaattgtggctggtgtattacta
caggatcatgaaatacgaggaaccgattttcatcaattgccctatcatagaattttcatt
atgcttttcctggagctttgtgctcctgaacctgtattagaagcagtaaattatcaagta
ttaactgctttttgccatacgctacatatacttagaccagccaaagcttcgggattttgt
tatgcttggctagaattagtttcacacagagtttttattgggcgtatgcttgcgattaca
ccgcaacaaaaatgttggggcatgtatgcgcaacttttaattgatctatttaagtatctt
gcaccataccttcgaaatgctgaacttgcaaaacctgttactttattatacaaaggaact
cttagagtactattagtcttattacacgattttcctgaatttctttgtgattatcattat
ggattttgtgatgtaattccacctaattgcatacaaatgaaaaatcttattttaagtgca
tatccaagaaatatgcgattacctgatccatttacaccaaacttaaaagttgatatgcta
caagagatagctcatgctcctcgagtattaaccaattttgcgtctatgatacaaccatta
agtttcaaaaaagaacttgattcgtatttaaaagcgcgagctccagttacttttctttct
gaattgcgcagtaatctacaagtatctcaagaagctggtgttcgctataatattcagtta
atgaatgctctagtactttatgttggaacacaagctatagcttttattcgcagcaaagga
catactcctaatatgtctactattgcacattctgcacatatggatatatttcaaaactta
gcagtcgatctcgatacagaaggtcgttatttattcgtaaatgcaattgcaaatcaattg
cgatatcctaacagtcacacgcattacttcagttgcactcttttatacttgtttgctgaa
gctaatacagaagcgatacaagaacaaattacgagagttcttcttgagagacttattgta
aatagacctcatccatggggtcttctcattacttttgttgaacttattaaaaatccaaca
tataaattctggacacatgaatttgttcactgtgcaccagaaatcgaaaaattattcgag
tcgatagctcgatcgtgtatggttcaaaaacaagtacagcccactccagaaccggagatt
ccagagtga
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integrated database retrieval system
