Anopheles merus: 121597669
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Entry
121597669 CDS
T08889
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
amer
Anopheles merus
Pathway
amer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121597669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amer03019
]
121597669
Messenger RNA biogenesis [BR:
amer03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121597669
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121597669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
CNOT1_HEAT
DUF3819
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
121597669
NCBI-ProteinID:
XP_041779558
LinkDB
All DBs
Position
3R:complement(24798242..24812342)
Genome browser
AA seq
2503 aa
AA seq
DB search
MNQEPFTYALSQIAHLVSNVNKKNSPATARQLAQLVKDFGLEADRHLLRCLFSSIDFGDA
THSAARGYCQARLLATELASLTNKPQLVANVCFAVDNPFPQQKSLKPTSNLLAQISKTLS
CTPIQETALSIALLHSEQPEIVRFAEAHLKNCLTELIESYIDSDSGSSNVEGSLNDVSPE
FLQQILSLISYGRHTALGLTDQTYERFRSQLCRDFPRDRVPLILAPLLYAESSEISAEIL
KLNTHSILQSSIMKTSWTNLVVEVGYSFTATLDDCRNHLLKVGGRDITPQDVAKIVSSMC
LTHESLSESSINLPTPSAFWPQGSGDPSGQKGKDGNGGSSASEVTTWKPEVLVQALKEVV
PALNWKEVCVALDHPEFLLKDRAGLSLLLTIVKMGMQASNMGQTFPVECLYQRWTNVEGQ
LSIISLILKNSDLYSFADHIYTSVSLDLLKTPPETDSKEVACWMSLHLVDVLLYIADHAN
LSEKVMKIFKVPGSLCPDVLFLALLQINPPMTTARQELFTNLVPIFLGNHPNAGTILHHA
WNHSTFNVTLRPIILHAMSDWYMVGEGDQSRLSRILDVAQDLKALSNLLNIRTYMFIIDL
ACLASRREYLKLEKWLADKIRDHGEPFVKTILKFLQRRCPQILGGKYSEEQIPKSSQLPP
ETLITILNCLQACIASCTPEVADMIHSMMQYGMLLNSKSRAQQQQQQQQQQAPQQQQQPP
PPGVLRSHRGLEAFGANAMGSQLLPPMVDSLNSLTANIGGLSIGGPGGGNSAFSFNNIIA
TPPSPSRLLPSSSPFPMMPLPPGAAAAAQAGTLSRLQQTPNDKLGAAAAAGAAGIPTQAL
APFTADAPLPVSKEVEDEANSYFQRIYNLPPHPTLSIDEVLDMLQRYKDSPNRHENDVYQ
CMLRNLFEEYKFFPQYPDKELQTTAQLFGGMVERNLVTTYVALGLALRCVLDALKKPEGS
KMYYFGITALDRFKNKLHLYPKYCEYVHSIAHFSEFPAHLIDYIEYGSQGQEPPNKTLGP
GPLPPSILQFMPSGAAGRGGPVGNPLYRSNSVTGTSNLTLAGVSSSASAAAAAAAAAAAA
AAAAAGGAGAGTPGKINLSAQLIPPGAAGGGAAGASGGGGAGAGVAGSSGNSGGTGGSTG
GGQPPRVKSIANATNIDTLLVATQDREEKIIAPPDAIQDKTAFIFNNLSQINLQQKCEEI
KEILQKDYYTWLAQYLVLKRASIEVNFHVLYSNFLDALKIPEINRLVTKETFRNIRVLLR
SDKGIANFSDRSLLKNLGHWLGMMTLGRNKPILHLDIDVKSLLVEAYNKGQQELLYVVPF
VAKVLESCAKSKVFKPPNPWTMSIMNVLAELHQEPDLKLNLKFEIEVLCKNLNIDVSDLK
PAIYLKDPERAQNIEYQLSQPKPPKETPAAAVMGGAAVAGLGVGGNVGGGGGGGGGGGVV
AVVPQLPPGAGPDDMGSSGPSSSPANVAMDPALAATGPPEPRFHYSDINIANPSLNAQHI
VYHPTVAILHTQTHLKVIVKSCLERTISEWISLIVDRSVKIASKTTEQIVRKDFALDSDE
TRMRRSAHNMARSLVAGMAMITCRDQMVQTIQNNIKVAFSAAVGSAQKEAIIEHAAQQLA
MDNIELVTAFIQKTAIEKVAIEMDKILAEDFQLRKLARQEGRRYWDAAVLSYHAERMPER
IKLNVGGVSPSQLAVYEEFSRNIPGFLPITERDAAQFAPKMAEMLPFVATPDEIGAIYDE
LASKMDTFIKTTRLVPILQLHTNNMEQLLECLIHAHRSLDNLTGCTLLNKAVEGLLEGLI
NIPDQIEHVKLYRDIHLRVMRLMQDHRLFGPMWTNKAITRYMLECREELRYNVEAVDLLI
TSNFVNMQQFDMMLVQLMDNGNNYVAVVFAMQLLQTFFIDERHNSAITENDLAGTIEMLH
RLTAHPRAPEGLTHLIEMLRANHDPNSFLMDRAIVGPTSYIHAGVAQARSDIDDSPGFLE
RAEFLLKDWVTIALSPNTCRDPLKGFSVFVGKMNAHGILKGDEPLTRFFRFATQYCIDLT
YRNMNEPNAKTKIFQFIDAYVRLIALLVKHSGESGSTNTKLNLLNKILGIIIGILLHDQE
VHTTAFQQVGYHRIFAMLFLELTTHDPILENISISVITAFCHTFHILRPSAAPGFCYSWL
ELIAHRVFIGRVLAQIPQQKGWNMYSQLLIDLFKYLAPFLRNAELAKPVQHLYKGTLRVL
LVLLHDFPEFLCDYHFAFCDVIPSNCIQMRNLILSPYPRNMRLPDPFTPNLKVDMLNDIG
GSPRISINYASSIQPVSFKKDLDSYLKARAPVTFLSELRSNLQISNEVGSRYNIPLMNAL
VLYVGTQAIAHIRSKNLGPTMSTIIHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPN
SHTHYFSCCILYLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFW
DHDFVHCAPEIERLFESVAKSCMVTSKSQQQIQNVEPDITECS
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagagcctttcacatacgccttatcgcagatcgctcacttagtgtcgaacgtg
aacaagaaaaactccccggccacagcacgtcagctagcgcagctggtgaaggacttcgga
ctagaggccgaccgtcacttgctgcgttgtctgttctcctcgatcgacttcggggacgcc
acacattccgccgccaggggttattgccaggctcgcttactggccacggaactcgcgagc
ctgacaaataaaccgcagctggtcgccaacgtttgcttcgccgtcgacaatccgttcccg
cagcaaaagtccctgaagccgacgtcgaacctgctggcacagatctcgaaaacgctctcc
tgtacaccgatccaggaaacggcgctttcgatcgctttgctgcactcggaacagccggag
atagtgcggtttgcggaagcgcaccttaagaactgtctcaccgagctaatcgagagctac
atcgactctgactcgggcagcagcaacgtagagggcagccttaacgacgtatcgcccgag
tttctgcagcagatactgtccctcatctcgtacggccggcacaccgccctcgggcttacc
gaccaaacgtacgagcgcttccggagccagctgtgccgcgactttccgcgcgaccgcgtg
ccgctcatcctagcgccgctgctgtacgcggagagttcggaaatttcggccgaaatattg
aagctcaacacgcacagcatcctgcaatcgtcgatcatgaaaacgtcctggaccaatctg
gtcgtggaggtgggctactcgttcaccgcgacgctcgacgactgccggaaccatctgctg
aaggtgggcgggcgcgacatcacgccccaggatgtggcgaagattgtgtcgtccatgtgc
ctgacgcacgagtcgctgtcggagagtagcattaatctgccgacgccgagcgccttctgg
ccgcagggcagtggcgatccgtccgggcagaagggcaaggatggcaacggggggtcgtcc
gcgtcggaagtcaccacctggaagccggaggtgctggtgcaagcgctgaaggaggtagtg
cctgcccttaactggaaggaggtgtgcgtagcgctggaccatccggagtttctgctgaag
gaccgggccgggctgtcgctgctgctgacgatcgtgaagatgggcatgcaggcgagcaac
atgggccaaaccttcccggtggagtgtctgtatcagcggtggacgaacgtcgagggtcag
ctgtcgatcatttcgctgatactgaaaaactccgacctgtactcgttcgccgaccacatc
tacacgagcgtgtcgctcgatctgctgaagacgccgccggagacggacagcaaggaggtg
gcctgctggatgtcgctacacctggtggacgtgctgctgtacatcgcggaccatgcgaac
ctgagcgagaaggtgatgaagattttcaaggtgcccggttcgctctgcccggacgtgctg
tttctggcgctgctgcagatcaacccgccgatgacgacggcccggcaggagctgttcacc
aatctggtgccgatcttcctcggcaatcatccgaacgcgggcacgatactgcaccacgcc
tggaaccactccacgttcaacgtgacgctgcgcccgatcatcctgcacgccatgtccgac
tggtacatggtcggggagggcgaccagtcgcggctgtcccgcatcctcgacgtggcgcag
gacctgaaggcgctgtccaatctgctcaacattcgcacgtacatgttcatcatcgatctg
gcctgcctggcgtcgcgccgcgaatacctcaagctggagaagtggctggcggacaagata
cgcgaccacggcgaaccgttcgtgaagacgatactgaagtttctgcagcgccgctgcccg
caaatcctgggcggcaagtacagcgaggagcagatcccgaagtcttcccagctgccgccc
gaaacgctcatcaccatactgaactgtttgcaggcgtgcatcgcgagctgtacgcccgag
gtggcggacatgatccacagcatgatgcagtacggtatgctgctcaattcgaagtcgcgc
gcccagcagcaacagcagcagcagcagcagcaggcaccccagcagcagcagcagccgccg
ccgcccggtgtgctccggtcgcaccgcggcctggaagcgttcggggccaatgcgatgggc
agccagctgctgcccccgatggtggactcgctcaacagcctgacggcgaacattggcggc
cttagcatcggtggccccggcggcggcaacagcgcgttcagcttcaacaacatcattgcg
acgccgccgtcgccctcccgcctgctgccctcgagcagcccgttcccgatgatgccgctg
ccgcccggtgcggccgccgctgcccaggccggcacgctcagccggctgcagcaaacgccg
aacgataagctcggggcggcggcggcagccggcgccgccggcattcccacccaggcgctc
gccccgttcacggccgacgcaccgctgcccgtctcgaaggaggtggaggacgaggcgaac
agctacttccagcgcatctacaacctgccgccgcatccgacgctgtcgatcgacgaggtg
ctggacatgctgcagcgctacaaggactcgccgaaccggcacgagaacgacgtgtaccag
tgcatgctgcgcaacctgttcgaggagtacaagtttttcccgcagtacccggacaaggag
ctgcagacgacggcccagctgttcggcggcatggtggagcgcaatctcgtcaccacgtac
gtggcgctcgggctggcgctgcgctgcgtgctcgatgcgctgaaaaagccggagggctcc
aagatgtactacttcggcattaccgcgctggaccggttcaagaacaagctgcacctgtac
ccgaagtactgcgagtatgtgcactcgatcgcgcactttagcgagttcccggcgcacctg
atcgactacatcgagtacgggtcgcagggccaggagccgccgaacaaaacgctcggcccg
ggaccgctgccaccgtcgattttgcagttcatgccgagcggggcggccggtcggggtgga
ccggtaggtaatccgctgtatcggagcaactccgtcaccggcacgagcaatcttacgctg
gccggtgtgtcatcgtccgcttcggctgcggctgcagccgcagctgccgcagccgccgcc
gccgctgctgctgccggtggggccggtgcgggtacgcctggaaagattaatctttccgct
cagctaatccctcccggtgctgccggcggtggagcagcaggtgctagcggtggcggtggg
gcgggtgcaggtgttgccggctcaagcggtaacagtggtggcactggtggaagcaccggc
ggtggacagccgccgcgcgtcaaatcgattgcaaacgcaaccaacatcgacacgctgctg
gtggcgacgcaggaccgggaggagaagatcattgcgccgccggacgccatccaggacaag
acggcgttcatcttcaacaacctgagccagatcaatctgcagcagaagtgcgaggagata
aaggagatactgcagaaggattactacacctggctggcgcagtatctcgtgctgaagcgc
gcctcgatcgaggtgaacttccacgtgctgtactcgaactttctcgatgcgcttaagata
ccggaaatcaaccgactggtgacgaaggaaacgttccgcaacatccgcgtgctgctgcgg
tcggacaagggcattgcgaacttttccgaccgctcgctgctgaagaatctcggccactgg
ctgggcatgatgacgcttgggcgcaacaagccgatcctgcacctggacatcgacgtgaag
tcgctgctggtggaggcgtacaacaagggccagcaggagctgctgtacgtcgtgccgttc
gtggcgaaggtgctggaatcgtgcgcgaagagcaaggtgttcaagccaccgaacccgtgg
acgatgtcgatcatgaacgtgctggcggagctgcaccaggagccggacctgaagctgaac
ctgaagttcgaaattgaggtgctgtgcaagaacctcaacattgacgtcagtgatctgaag
ccggccatctacctgaaggacccggagcgggcgcaaaacatcgagtatcagctgtcgcag
ccgaaaccaccgaaggagacgcccgccgcggcggtgatgggtggtgcggcagtggccgga
ctcggtgtcggtggtaatgtgggcggtggtggtggaggtggtggtggcggcggtgttgtt
gccgtcgtgccgcagcttccgcccggggccggcccggatgatatgggctcgagtggaccg
tccagctcgccggcaaacgtggcgatggatccggcgctggcagcgaccgggccgccggag
ccacgcttccactactccgacattaacattgcgaacccgagcctgaacgcgcagcacatc
gtgtaccatccgacggtggcgatcctgcacacccaaacgcacctgaaggtgatcgtgaag
agctgcctggagcgcaccatctccgagtggatctcgctgatcgtggaccgcagcgtgaag
attgcgtccaaaacgaccgaacagatcgtgcgcaaggatttcgcgctcgactcggacgag
acgcggatgcgccggtcggcccacaatatggcgcgcagtctggtggcgggcatggcgatg
ataacgtgccgcgaccagatggtgcagacgattcagaacaacatcaaggtggcgttctcg
gcggcggtcggtagcgcgcagaaggaagcgatcattgagcacgccgcccagcagctggcg
atggacaacattgagctggtgacggcgttcatccagaagacggccatcgagaaggtggcg
atcgagatggacaagatactggcggaggactttcagctgcgcaagctggcgcggcaggag
ggccggcgctactgggacgcggcagtgctgtcgtaccatgcggaacggatgcccgagcgc
atcaagctgaatgtgggcggcgtgtcgccgagccagctggcggtgtacgaggagttttcg
cgcaacattcccggcttcctgccgattacggagcgcgatgcggcccagtttgcccccaag
atggcggagatgctgccatttgttgctacaccagacgagattggcgcgatctacgatgag
ctggctagcaagatggatacgttcatcaaaacgacacgtctcgtgccgatattgcagctt
cacaccaacaacatggagcagctgttggagtgtttgattcacgcgcaccgttcgctcgac
aatctgaccggctgcacgctgctgaacaaggcggtcgagggcctgctggagggtttgatc
aacatcccggaccagatcgagcacgtcaagctgtaccgggacattcatctgcgcgtgatg
cgcctgatgcaggaccatcggctgttcggtccgatgtggacgaacaaagcgatcacgcgc
tacatgctagagtgccgggaggagctgcgctacaacgtggaagcggtcgatctgctgatt
acgtccaactttgttaacatgcagcagttcgacatgatgctggtgcagctgatggacaat
gggaacaattacgtggcggtcgtgttcgcgatgcagctgctgcagacgttcttcatcgac
gagcggcacaattcggccatcacggagaacgatctggccggcacgatcgagatgctgcac
cggctgacggcgcacccgcgcgcaccggaaggtttgacgcatctgatcgagatgctgcgc
gccaaccacgatccgaactcgttcctgatggatcgtgccatcgttgggccgacctcgtac
atccacgcgggtgtagcccaggcacggtcggacattgacgattcgcccggttttctcgag
cgggccgagtttctgctcaaggactgggtcacgattgcactgtcgcccaacacgtgccgc
gatccgctcaagggcttcagcgtgtttgtgggcaaaatgaacgcgcacggcatactgaag
ggtgatgagccgctgacgcgcttcttccgcttcgccacgcagtactgcatcgatctgacg
tatcgcaacatgaacgagccgaacgcgaaaacgaaaatcttccagtttatcgacgcgtac
gtgcggctgattgcgctgctggtaaagcactctggcgagagtggcagcaccaacacgaag
ctgaatctgctgaataagattctcggtatcatcatcggcatactgctgcacgatcaggaa
gtacacacgaccgcgttccagcaggtcggctatcatcgcatcttcgccatgctcttcctc
gagctgaccacgcacgatccgatcctggagaacatcagcatcagcgtgatcacggcgttc
tgccacacgttccacatactgcgcccgtccgcggcgcccggcttctgctactcctggctc
gagctgatcgcgcaccgcgtcttcatcgggcgcgtgctcgcccaaatcccgcagcagaag
ggctggaacatgtactcgcagctgctgatcgacctgttcaagtatctggccccgttcctg
cgcaatgccgagctggccaagccggtgcagcatctgtacaagggtacgctgcgcgtgctg
ttggtgctgctgcacgattttcccgagtttttgtgcgactaccatttcgcgttctgcgac
gtcatcccgtcgaactgcatccagatgcgcaacctgatcctgtcgccgtacccgcgcaac
atgcgcctgcccgatccgttcacgccgaatctgaaggtcgatatgctaaatgacattgga
ggatcgccacggatttccatcaactacgcgtcctccattcagccggtaagcttcaaaaag
gatctcgactcgtacctgaaggcccgcgcaccggtcaccttcctgtcggagttgcgctcc
aatctgcagatctcgaacgaggtcggctcgcgctacaatattccgctgatgaacgcgctc
gtgctgtacgttggcacccaagcaattgctcacattcgatcgaaaaatttgggcccaaca
atgtccacgatcatacacagcgcgcacatggatatcttccaaaacctggcggtcgatctg
gacacggagggacgctacctgttcctaaacgcgatcgccaaccagctgcgctatccgaac
agtcacacgcactacttcagctgctgcatactgtacctgttcgcagaggcaaactcggaa
gccattcaggaacaaatcacccgcgttttgctcgagcgcttgatcgtcaatcgtccgcat
ccgtggggtctgctgatcacgttcatcgagctgatcaagaatccgatctacaagttctgg
gatcacgatttcgtgcactgtgcgccagaaattgaacgacttttcgaatcggtggcaaaa
tcgtgcatggtcacgagcaagagccagcagcaaattcaaaacgtcgagccggatatcacc
gagtgcagctaa
DBGET
integrated database retrieval system
