Astyanax mexicanus (Mexican tetra): 103022047
Help
Entry
103022047 CDS
T05042
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00780
Biotin metabolism
amex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
103022047 (hlcs)
Enzymes [BR:
amex01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
103022047 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
103022047 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
103022047 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
103022047 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
103022047
NCBI-ProteinID:
XP_007247351
Ensembl:
ENSAMXG00000008888
UniProt:
A0A8B9JCZ3
LinkDB
All DBs
Position
20:complement(30801519..30848802)
Genome browser
AA seq
903 aa
AA seq
DB search
MLITLCYLYLWVRFQKCYTTVIRGALRRLSASRGGVAFCALHETSSPPAFLTRGNKAIYF
TEPQACDDLSKWTLLLGSSLISGPRVENIAFIIEATAGQKAAQSPQRLNKKVLKWSDYCL
PLACSPGQPYRAVAEASLDNFSTLGVAFLEGRLQMENGLIPEKIVSVSLRESALKELFEK
QRSDVGKTLQSFPACLPKGVVLSTASLCEQEVLDVLQLRRKSSLRLSAARRDSDASSAGS
ERRAVREQPVSESDHAADHHHMEGHHLHLSSCHECLELENSTILSVKYASVENIPDLPDD
YECTGVDDDDEEVGESVSPYFSGQSRRMNVNGKPPNVLVFTGGCEERYERVRSLLAECID
TDSYIIYPLRPQQALGEPWLESALLLVLATDQPLTPQLQLRFLDYLSQGGKVLGLSSTLC
PAGLRLKPREGRRDQICRLSFTKADSSEVQLSVLASGSAYEREPQEGSSSAQVELWGELS
TEKKDTEEKDMVIVRVTHGEDSGEAVLCQVRLETAPDAEQVQSSAGFSELKMSNARRYEV
LTEILTSLGLSCELSQVPPPSPVYLLCTQPDLKSVFVSWLRGQVDGEGVLRSMKTRLRVA
WGREEQTELAEGELALHTEPPEHLSEHFSMQTYTQHLQSRRLGRTLLYTDVTPTTMDLLE
GLMLKVPEDMGLIAVAARQTKGKGRGGNAWLSPLGCAMFTLHLQVEVSSRLGQRIPFLQH
LAALAVVEAVRTLPGYEDIDLRLKWPNDIYYSNLMKLGGVLVNSTVMGSTFHLLVGCGFN
VSNSNPTICINDLVVQQNWERGSSLEPLSSAQLIARSVTLLEQLISQFQQQGPSAVLPLY
YKRWVHSNTQVRLWSEDGPEAAVVGLDDHGFLQVSSREQGTVSVQPDGNSFDMLRNLIIT
KHN
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgctgataacgctgtgttacctgtacctgtgggtccgcttccagaagtgctacacgacg
gtgatccgcggcgcgctgaggcggctgagcgcgagccgcggcggggtggctttctgcgcc
ctgcacgagaccagcagccccccagccttcctcacccggggaaacaaggccatatacttc
accgagccgcaggcatgtgatgacctcagcaagtggacactgcttttggggtcctctctg
attagtggaccaagagttgagaatatcgcctttatcatagaggccacagcaggacagaaa
gcggcccagtcacctcaaagattaaataaaaaagttctgaagtggtcagactattgcctt
cctctggcctgcagtcctggacagccctacagggcagtggctgaggccagcctggacaac
ttcagcactctgggagtggcttttctggaaggtcgcctgcagatggaaaatggccttata
ccggaaaagatagtttcggtgtcactcagggaatctgcactgaaagagctctttgaaaag
cagcggtcggacgtggggaaaacacttcagtcatttcccgcctgcttaccgaaaggggtt
gtgctgtccaccgcctctctgtgcgagcaggaagttctggatgtgctgcagctccgcagg
aagagcagcctgcgtctttcagcagcacgcagagactcggacgcctccagcgccggcagt
gaacgcagggctgtacgtgagcagccggtgtcagagtcagatcacgcagcagatcaccac
catatggagggccaccacctacacttgtccagctgccacgagtgcctggagctggagaac
agcacgatcctctcggttaaatatgcctcagtggagaacatcccagacctacctgatgac
tacgagtgcacaggagtggatgatgatgatgaggaggtgggcgaaagtgtctcgccctac
ttctcaggccagagccggcggatgaacgtcaatggaaaacctccgaatgtgctggtgttc
acaggtggctgtgaggagcgttacgagcgtgtgcgctccctgctggctgaatgtatcgac
acggacagttacatcatttaccctctccggcctcagcaggcgctgggcgagccctggctg
gagagcgctctgctgctggtgctggccaccgaccagccactcacaccccagctgcagctg
cgcttcctggactacctgagccagggcggtaaagtcctgggcctgtcgagcacactgtgc
cccgccggactccgactaaagcccagagagggtcggagggaccagatctgcaggctaagc
ttcactaaagcagacagttctgaggtgcagctgagcgtactggccagcgggagcgcctac
gagcgcgagcctcaggagggcagcagcagcgcacaggtggagttgtggggggagctgagc
actgagaagaaagatacagaggaaaaggacatggtcatagtcagagtgacgcatggagag
gacagtggggaagcagtcctatgtcaggtgcgtttggaaactgccccagacgctgagcag
gtgcagagctctgctggtttctccgagctgaaaatgagtaatgcaaggagatatgaggtt
ctgactgagatcctcacctctctgggactgagctgtgagctgagtcaggttcctccaccc
agccctgtctacctgctctgcacccagccggatctgaagagtgtgttcgtgagctggttg
cgggggcaggtggatggtgagggggtgctgcgctctatgaagaccaggctgagagtggca
tggggcagagaggagcagactgagctggctgagggagagctggctctgcacactgaaccc
ccagagcacctctctgaacacttcagcatgcagacctacacccagcacctgcagagccgg
cgactgggccgcaccctgctctacactgacgtcacaccgaccaccatggacctgctagag
gggttgatgttgaaggtgccggaggacatggggttgattgccgtggcagcccggcagact
aagggcaaagggcgtggagggaacgcgtggctgagtccgctgggctgtgccatgttcaca
ctgcacctgcaggtggaggtgagctcacgactcggccagagaatccccttcctacagcac
ctcgctgctctcgctgtggtggaggctgtgcgcacactgcctggatacgaggatattgat
cttagattgaaatggcccaacgatatctactacagtaacctgatgaagctgggaggagtt
ctggttaactccactgtaatggggtccaccttccacctcctcgtcggctgtggcttcaat
gtgagtaacagcaaccccaccatctgcattaatgacctggtggtgcagcagaactgggag
cgggggagcagtctggagcccctgagctcggctcagctcatcgctcgctcggtcactctg
ctggagcagctcatctctcagttccagcagcagggaccgagcgcagtgctgcctctgtac
tacaagagatgggtgcacagtaatacacaggtgcgcttgtggagcgaggatggtccagag
gctgctgtagtggggctggatgatcatggcttcctgcaggtgagctctcgagagcagggc
accgtctcagtccagccggacgggaactccttcgacatgctaaggaacctcatcattacc
aagcacaactag
DBGET
integrated database retrieval system
