Astyanax mexicanus (Mexican tetra): 103022049
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Entry
103022049 CDS
T05042
Name
(RefSeq) T-lymphocyte activation antigen CD80 isoform X1
KO
K05412
CD80 antigen
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03267
Virion - Adenovirus
amex04514
Cell adhesion molecule (CAM) interaction
amex04517
IgSF CAM signaling
amex04620
Toll-like receptor signaling pathway
amex04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
103022049
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
103022049
04517 IgSF CAM signaling
103022049
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103022049
04672 Intestinal immune network for IgA production
103022049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
amex04090
]
103022049
CD molecules [BR:
amex04090
]
Proteins
103022049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
C2-set_2
I-set
C2-set_3
Ig_2
Renin_r
EphA2_TM
Ig_CD22
TMEM154
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
103022049
NCBI-ProteinID:
XP_049322969
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All DBs
Position
18:12044815..12062685
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AA seq
290 aa
AA seq
DB search
MCLLFLLILSALRAAFSDDGAALQVVEGRVGGSVLLRCNVSDSPPVKGIYFQKDNKEDDN
KKERIIFVNGFYTKKPDISPEYINRTSVNRSDKSLKMWNLKVSDEGEYFCAVMSEPESYT
ATKFNLTIKAPFSIPTVTIKSRSDGGDGTESWALQCLSSGGYPPDVLNWTVFGKENSVLL
QEGVSESYADEHSGVWTINQTATFNCTHPANITCSVGGATSPPFSICTDTPSSPEYTVII
AVVLLFLFILVVVIILIRVCQRQQRPEVELATVETDQLKPADPCPAESFL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcttctgttcctgcttatcctctcagccctgagggcggccttcagcgatgatggc
gctgcattgcaggtcgtggagggcagagtgggcgggtctgtgttgctgaggtgcaacgtt
agtgattctccccccgtaaaagggatttacttccagaaggacaacaaggaagatgacaac
aagaaagaaaggatcatctttgtaaacggcttctacactaaaaagcccgacataagccct
gagtacattaacagaaccagtgtaaacagatctgataaaagcttaaagatgtggaacctg
aaagtgtccgatgaaggagaatatttttgcgctgtaatgtccgaaccagaatcctacacc
gctactaaattcaatctgactattaaagctcccttcagcattcccacagtgaccataaag
agtcgtagtgacggtggagatggcacagagagctgggcgctgcagtgcctgtcgtcaggt
ggatacccgccagatgtcctgaactggacggtgtttgggaaggagaacagcgtcctgctg
caggaaggggtcagtgagagctacgctgatgagcactccggagtgtggaccattaaccaa
acagccacattcaactgcactcaccctgccaacatcacctgctcagtaggtggcgccaca
tcccccccattcagcatatgtacagatacaccgtcttctcctgagtacacagtgatcata
gcggtagttctactttttctattcatcctggttgtcgtcatcattctcataagggtgtgc
caaagacaacaacgcccagaagtggagcttgccacagtagagactgaccaattaaagccg
gctgacccctgccctgctgagtctttcctataa
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