Astyanax mexicanus (Mexican tetra): 103024720
Help
Entry
103024720 CDS
T05042
Symbol
capn1a
Name
(RefSeq) calpain 1, (mu/I) large subunit a
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04141
Protein processing in endoplasmic reticulum
amex04210
Apoptosis
amex04217
Necroptosis
amex04218
Cellular senescence
amex04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103024720 (capn1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103024720 (capn1a)
04217 Necroptosis
103024720 (capn1a)
04218 Cellular senescence
103024720 (capn1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103024720 (capn1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103024720 (capn1a)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
103024720 (capn1a)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C2: calpain family
103024720 (capn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
103024720
NCBI-ProteinID:
XP_022540977
Ensembl:
ENSAMXG00000043021
LinkDB
All DBs
Position
7:2188839..2208505
Genome browser
AA seq
704 aa
AA seq
DB search
MLSYGGISAHISASRLKSEGMGSYEQAVHFQNQDFEELKQECVEGGFLFEDPCFPAEPPS
LGFKELGPHSSKTSGVEWMRPTELCDDPQFILGGATRTDICQGALGDCWLLAAIASLTLN
EKLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWVDIVIDDRLPVKDGELMFVHSAEGNEFW
SALIEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKPPRDLYRIISKALERGSL
LGCSIDITSTFDMEAVTFKKLVKGHAYSVTGLRQVNFRGDLQRLIRIRNPWGQVEWTGAW
SDNSSEWDEIDPTEREDLCLQMEDGEFWMSFNEFLRQFSRLEICNLTPDALSDDGLSHWN
TIQFHGSWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDDEVACSFLVALLQKDRR
RYRRQGQDMHTIGFAVYEIPEEFRGCQNVHLKKNFFLSHSSCARSETFINLREVSARLRL
PPGEYLIVPSTFEPSKEADFVLRVFTEKQSETEELDDEISADLEDEEEITEDDIDDSFKS
MFAQLAGEDMEISVHELRTILNRVVLRHKDLKTDGFSMESCRTMVNLMDKDGSARLGLVE
FQILWNKIRKWLVIYRQFDLDKSGTMSSYEMRLAVESAGFKLNNRLNQILVARYAENEVI
DFDNFICCLVKLEAMFRSFQQLDKEGSGEVEMNITEWLYITMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgtacggagggatctcagcacacatcagtgccagcaggctgaagtccgaggga
atgggttcctatgagcaggcggttcacttccagaaccaggactttgaggagctgaagcag
gagtgtgtggaggggggcttcctgttcgaggacccctgcttccctgctgaaccgccctcg
ctggggttcaaggagctcggaccgcactcgtccaaaaccagtggagtggagtggatgagg
cctacggagttgtgtgatgaccctcagtttattctgggtggagctacgaggacggatatc
tgtcagggagctctcggtgattgctggctcctggctgccattgcttctctcacgcttaat
gagaagctcctgcacagagtggttcctcacggccagagcttccaggacgactacgccggc
atcttccattttcagttctggcagttcggggagtgggtggacattgtgattgatgaccgg
ctgcctgttaaagatggagagctgatgtttgttcactctgcagagggaaacgagttctgg
agcgccttaatagaaaaagcttatgctaagctgaatggatcgtacgaggcgttgtccggg
ggctccaccactgaggggtttgaggattttacaggaggcgtgtcggagatgtacgaactc
agaaaacctcccagagatctgtaccgcatcatctccaaagcactggagagaggatcactg
ctgggctgctctattgatatcaccagcacatttgatatggaagctgtgacgtttaagaag
ctggtaaaaggccacgcctactcagtgacgggcctgaggcaggtgaacttcagaggagat
ctgcagagacttattcgcatacgtaatccatggggtcaggtggaatggacgggggcctgg
agtgacaactcgtctgagtgggatgagatagatccaactgagcgggaggatctgtgtctg
caaatggaggatggggagttctggatgtcgtttaatgagtttttgaggcagttctccagg
ttggagatctgtaatttgactccggatgccctcagtgatgacgggttgagccactggaat
acaattcagttccacggatcgtggaggaggggcagtaccgccggaggctgcaggaaccac
cccaatacgttctggataaacccgcagtataagatcactctgctggaggaggacgatgac
ccggaggatgatgaggtcgcctgcagcttcctggtggctctgctgcagaaggaccggcgg
cggtaccgcagacagggacaggacatgcacaccatcggattcgctgtttacgagattcct
gaggagttcaggggttgtcagaatgtccacctgaagaagaacttcttcctgagccactcg
tcctgcgctcgatccgagaccttcatcaacctgagggaggtgagcgcccgcctgcggctg
ccccccggcgagtacctcatcgtcccctccaccttcgagcccagcaaggaggccgacttc
gtcctgcgggtcttcaccgagaagcagtccgagacagaggagctggatgatgagatttct
gcagatttagaagacgaggaggaaatcacagaggacgatatagacgactccttcaagtct
atgtttgctcagctggctggagaagatatggagatatcggtgcatgagctccggaccatt
ctcaacagagtggtgttgagacataaagacctgaagacggacggcttcagcatggagtcc
tgcaggactatggtcaaccttatggataaagatggcagtgcccgcctgggcctggtggag
ttccagattctgtggaataagatcaggaagtggttggtgatctacaggcagtttgacctg
gacaagtccgggaccatgagctcgtatgagatgcgtctggctgtagagtcagcagggttt
aaactcaacaaccggctgaaccagatcctggtggcccgatacgctgagaatgaagtcatc
gattttgataactttatctgctgcctggtgaagctcgaggccatgtttagatcgtttcag
cagttggataaagaagggtccggagaggtggagatgaacataactgaatggctgtacatc
accatgtgtgggtga
DBGET
integrated database retrieval system
