Astyanax mexicanus (Mexican tetra): 103024927
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Entry
103024927 CDS
T05042
Symbol
lama3
Name
(RefSeq) laminin subunit alpha-3 isoform X1
KO
K06240
laminin, alpha 3/5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04382
Cornified envelope formation
amex04510
Focal adhesion
amex04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103024927 (lama3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103024927 (lama3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103024927 (lama3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
Laminin_II
EGF_laminin
Laminin_G_3
EGF_LMN_ATRN
PHM7_cyt
MftB_chaperone
Motif
Other DBs
NCBI-GeneID:
103024927
NCBI-ProteinID:
XP_022525349
Ensembl:
ENSAMXG00000017948
LinkDB
All DBs
Position
16:15931034..15959093
Genome browser
AA seq
1733 aa
AA seq
DB search
MSCVWGLLLCCLTGPWLCNADQKTPYGYVQFMQSSGEHRLRQSSRKYCDHSAGAITKPCG
PGQYRERWGAYRGRCVPCNCNGLSHECDPISGKCHNCQLNTAGDQCERCAEGYYGSAVLR
TCQVCPCPFPDPYRSFALGCLQVGDQLECLCKPGYSGTRCERCSAGYYGDPVQVGGSCQL
CHCDHGYICDPLTGECEDPNNPSTDGDCQECDTCIQILLEELEMMDYELHQLKVDLEPFG
SSSAFLAALKKLEDAIKSTKLLVMKYSASVKLLEPKVKELEADVAGVRKDLSELSSKTDL
ASSVAEELLNNLDKTQLKGQNLLTDTEQLLKRIQEFLDQLKLSNSTIPSKDIVKMLKEAR
QMVSQMRKQNCDVQQKLAGDELEEAQKLLDYIMKNLTNPLNSTLAAADAIAQDLMSQIAD
LKDLEEALQQAEKTVNKTKQMNDGSEATLSDILKHRTKMEEEKHIVSADLAMIRGALNEI
IQVLMMMEEIKNDLAKFAAEIDGAETDLNLKLSELSKATALQGIVREAEEHAQDLMNLAM
HFQMSMLNYTNSSAVHKAVESINAYRDVIDALKKAEAAANEAHKAAEEALAEVKAQNLTV
TADELKNSANNLLDQAEKAENNLKEATQIYDTIKDRLDKAMAKERSMNEELQTTVKNMNQ
INRDDIATLINESKDAVQAANDTVSNTNAKLKNITEDLDKIRITGGVSNLDNILNDVNNT
LNELNSVFPELTDSLAEVEKQSSQVPNTTNMSDNLMRIKDMIEKTRDMANRIRGPILFSG
DSHVELRPPKNLEDLRAFTALNLTIHRPKVDTRKRRQSTEEEDNLFVLYLGNKNTQKDYV
GLVIRNSVLYCVYKLGGQIHEIKTKEITRSSVNGSFMDRVDFRRVYQDAEVIFTETYTSS
APRKLQPMTSQANTTISLLDLDRDEVVLYVGGYPNDFTPPKELQYPGFTGCIEFSTLNEY
ILGLYNFQKAVNIKNTDRCLRGEIRQIGQYFDGTGYGRINVQDSSKVIKFFLLSRQENAL
LFYMGNKDSYFTVTLEEGFVVLRVTQGDQRLTRKSDKKVFPLEYYQQIRILEDNSRTVDT
APYSVNVRFDFGTLHSADTQAFVGGIPAAIAARHNITHPPVRGCLKSLEVDIYVRFIEEV
GIVPGCPEDLLGLREASMELGSSLAFAPNITQSNTGTMVSLGFKSTQNSGVLLAHTDNKD
GGFELALVDGHVEMKDGANLLKSKNRYDEGGWHYVTAFRNSTGMELTIDNSDSAEIQTPP
LDALSADINVVLGKETFNGCLRNFYMRRLESNYIPADLSSFNKAGAVSLISCPAQRPPLA
ITEKSGLRRRGTVNGLDIMKEFQAERKAAKSHLKDFSQQVCSKPASLIQAYHLNARSQLQ
YNIRPAELNFRPHFSLDVQTRSANGLLLHIADKHDVSRVVLFMEGGRVKLSVGEGGLIHY
QKKINNGDWHNIRFSMEQNTFHLVVDGFRVTDGRLQKDEGISLGLQAPAYIGTGLAQSVS
RNHEKSFPKKSVIGCIRDVRFYEVLVGEPAVNHGGAPCFDGAAVKGAYFAGRGSHAALEK
YFILGADFNLTFEVRPENLTGLLFHSRGHHGHSLSVFLKKSKMVVQMNDGAGDYSISVTP
PSTLCDHTFHHVTVTKTGNVMRLKMGRESNHAVGPSVHSYSLVTRDTLYIGGVPDRKRKR
VPVWSSFVGCMRNVRINQEPVSFDTITSVFGPVNTNACPEDQQQTSGGQKPRH
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtgtgtggggacttctgctctgctgtctgactggaccgtggctttgtaacgcg
gaccagaaaactccatatggttatgttcagttcatgcagtcaagtggtgagcatcggttg
cgacaatcttctagaaagtactgtgaccactctgctggggcaattacaaagccctgtggt
cctggacagtaccgtgagagatggggagcctacagaggtcggtgtgtgccctgtaactgc
aatggcttgtcccatgagtgtgaccctatttcaggaaagtgccataactgccagctgaac
acagcaggtgaccaatgtgagcggtgtgcagagggttactatggtagtgcggttctccgg
acctgccaagtgtgtccatgtcccttcccggacccgtatcgtagttttgcacttggttgc
ctgcaggtcggggaccagcttgagtgcctgtgcaagccaggttattcaggaactcgctgt
gaaaggtgctctgctggatactacggtgatccagtacaggttggagggagttgccagctc
tgtcactgtgatcatggatatatatgcgaccccctcacaggcgagtgtgaagatccaaac
aaccccagtacagatggtgactgccaagagtgtgacacctgcattcagatattactagaa
gaactagaaatgatggattatgaactccaccaactgaaggttgatcttgagccctttggg
agcagctctgcatttcttgctgctctgaagaaactggaagatgccattaaatctacaaag
ttgttagtgatgaagtacagtgcttctgtaaaactgttggaaccgaaggtgaaggaactc
gaggcagatgtggccggggtcagaaaagacctgagtgaactcagcagcaagacagatttg
gcttcatcagttgctgaggagttgttaaataatttagacaaaactcagctgaaaggccaa
aaccttctcactgatacagagcagcttctgaaaagaatacaagagttcctggatcaactg
aaattgtctaatagcaccatacccagtaaggacattgtgaagatgttgaaggaagcgaga
cagatggtgtcacaaatgcgaaagcaaaactgtgatgtgcagcagaaattggctggggat
gagctggaggaagctcaaaaacttttagattatatcatgaagaatctaacaaatcccctg
aacagcacactggctgctgctgatgcaatcgctcaagacctcatgtcccagattgctgat
cttaaagatcttgaggaagctctgcaacaggcagagaaaactgtgaacaagaccaaacag
atgaatgatgggagtgaggcaaccctgtcagacattctgaaacatcgtacgaagatggaa
gaagaaaaacatattgtctctgctgatttggcgatgattagaggagcactgaatgagata
atacaggttctgatgatgatggaagaaataaagaatgacttggcaaaatttgctgcagag
attgacggagcagaaacagatttaaatctaaaactcagtgagctttccaaagccacagcc
ctgcagggtatcgtcagagaggcagaggaacatgcccaggatctcatgaatcttgccatg
cattttcaaatgtctatgctgaattacaccaactcttcagctgtccataaagcagtggaa
tccatcaatgcttatagagatgtcattgatgctctcaaaaaggctgaagcagcagcaaat
gaagcccataaagctgcagaagaggctctagcagaggtgaaagctcaaaatctgacagtg
acggctgatgaactgaagaattctgcaaacaatttacttgaccaggctgagaaagctgag
aacaatctgaaagaggccacacagatatatgataccattaaagaccgtctggacaaggca
atggccaaagaaaggagcatgaacgaagagctccaaactactgtaaagaatatgaaccaa
atcaacagagatgatattgcgacactgataaatgaaagtaaggatgctgtccaagctgct
aacgacactgtgtccaacactaatgcaaagttaaagaacatcactgaggacttggataag
atccgcattaccggtggagtttcaaacctggataatatactcaacgatgtcaataataca
ttaaatgaactgaacagtgtattccctgagctcacggattcactcgcagaggtggagaag
cagagcagccaagttccaaacacaaccaacatgtcagacaatctcatgaggatcaaggat
atgatcgaaaagaccagagatatggccaacagaatcaggggtcccatcttgttctctggt
gatagccacgttgagctgcgtccacccaaaaacctggaagatctacgagccttcacagcc
ctcaacctgactatccaccggcccaaagtagacactcgcaaacgccgccagagcacagag
gaggaagacaatctctttgtcctttacctgggaaacaagaatacccagaaggactatgtt
ggattggtgattcggaacagtgtgctttattgtgtgtacaaacttgggggacaaatccat
gaaataaagaccaaagaaatcaccaggtccagtgttaatggctcatttatggatagagtg
gacttccgcagagtctaccaggatgcagaagtcatcttcacagagacctacacctcctct
gcacccagaaagctgcagccgatgacaagtcaagctaatacaactataagcttgctggac
ctggaccgtgatgaggtggtcttgtatgtcgggggctatccaaatgacttcactccacca
aaggagctccaatatccaggctttacaggatgcattgaattttccacattaaatgaatat
atccttggcctctacaacttccagaaagctgtcaacataaaaaatacagaccgatgtcta
agaggtgagatccgtcagataggacagtattttgatggcacaggctacgggaggatcaac
gtacaagacagcagcaaagttatcaaattcttcctcctgagtcgacaagaaaatgctctg
ctgttttatatgggtaacaaggattcctatttcactgttactctggaggaaggctttgtt
gttttgcgggttacgcaaggagaccaaaggttaactcgaaagagtgacaaaaaagtcttc
cctttggaatactaccaacaaattcgaattctcgaagacaacagccgtactgtagatact
gctccatattctgtcaatgttcggtttgattttgggactctacactctgcagacactcaa
gcttttgtaggtggcattccagcagcgattgcagcaaggcataacatcacccacccacct
gtgagaggatgcctgaaaagccttgaagtggatatttacgtcagattcatagaggaagtc
ggaattgtccctggttgtccagaggatttactgggtttgcgagaagcttctatggagctg
ggaagctctcttgcttttgctccaaacatcacccagtccaacacaggaactatggtttca
ctggggttcaaatccacccagaacagcggagtcctgcttgcacacactgacaataaggat
ggaggatttgagctggctctggttgacggccatgtggagatgaaagatggcgcaaacctt
ctgaaatccaagaacagatatgatgagggagggtggcactatgtgacagctttcaggaac
agcactggaatggagctgactatcgataattcggacagcgcagaaatacagacacctccc
ttagatgccttatccgctgacataaatgttgtattgggaaaagaaaccttcaacggctgc
ctaaggaacttttacatgaggagattggagagcaattacatcccagctgatttgagcagt
ttcaataaggcaggagctgtgtctttaatatcatgtccagcacagcgccctcctctggcc
atcactgagaaaagcggcctcagacgcagagggacagttaatgggctggacatcatgaag
gagtttcaggcagaaagaaaagctgcaaaaagccacttaaaggatttttctcagcaagtt
tgtagtaagccagccagtttaatccaagcatatcacctcaatgccagaagtcagctacaa
tacaacatacgtccagcggagctcaattttagacctcatttctccctggacgtgcaaacc
aggtcagccaatggtctgctgcttcacatcgcagacaagcacgatgtctctcgagtggtt
ttattcatggagggtggcagggtcaaactctccgttggagaaggaggactgatccactat
caaaagaagattaataatggcgactggcacaatatcaggtttagtatggagcagaacaca
tttcaccttgtggtggatggctttcgggtgacagacggacggctgcagaaggatgaaggg
atttctctggggctacaggcgcctgcctacattggaactggattggctcagtcagtcagc
agaaatcatgagaaatccttccctaagaagagtgtgattggctgtatccgtgatgtcagg
ttttatgaagttctggtaggagaaccagctgttaatcatggtggtgccccatgttttgat
ggtgcagcagtaaagggggcatatttcgctggtcgtggatctcatgctgctttagagaag
tactttatactgggtgctgattttaacctcacatttgaggttcgcccagaaaatctcacc
ggcttactgttccacagcagaggccatcatggacacagcctcagtgtttttctgaaaaag
tccaagatggtggtgcagatgaatgacggagcaggagattacagcatttcagtcactcct
ccatcaacgctgtgtgatcacaccttccatcatgtgacagtgaccaaaactggaaatgtt
atgaggctaaagatggggagagaatctaatcatgctgtcggaccttctgtgcattcctat
tccctcgtgactcgtgacacactttacattggaggtgtcccagacaggaagcgtaagagg
gtccccgtgtggagctcctttgtgggttgcatgaggaatgtgagaatcaatcaggagcct
gtttcttttgacactattaccagtgtttttggccctgtcaacacaaatgcgtgcccagaa
gaccagcagcagaccagtgggggtcagaaacccagacactga
DBGET
integrated database retrieval system
