KEGG   Astyanax mexicanus (Mexican tetra): 103024937
Entry
103024937         CDS       T05042                                 
Symbol
phf1
Name
(RefSeq) PHD finger protein 1
  KO
K11467  PHD finger protein 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103024937 (phf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amex03000]
    103024937 (phf1)
   03036 Chromosome and associated proteins [BR:amex03036]
    103024937 (phf1)
Transcription factors [BR:amex03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    103024937 (phf1)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     103024937 (phf1)
SSDB
Motif
Pfam: Tudor_2 PHD Mtf2_C PHD_ash2p_like ASH2L-like_WH DUF4537 Chromo PHD_2
Other DBs
NCBI-GeneID: 103024937
NCBI-ProteinID: XP_022524407
Ensembl: ENSAMXG00000024614
LinkDB
Position
1:114666595..114703814
AA seq 504 aa
MGVVSEGEDVLARWSDGLLYLGNVKRVDVVKQCCLVRFEDNSEFWVLRKDIHSFSASGEE
VCCVCDGPPLKEPLINCLKCRHGYHPQCHTPTIDPEVDSNSWICRQCVFAVATKRGGALK
RGRFARLMQLMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYQFQCSICTNGPETIQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFTNENWESLLLGTLSDTPKQDRCNNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLSSDSSPLIADQPVSITHRRSPLSLPCQRRTVGPESRKSKRRIVETQTCQPGVT
ANNIDLAPCCHGYVGGANVYNTRKSEEDLSLGSPPKRMLALYHPSYNGSQGLSRTLHHYS
AEDPCRLPAPCLPYSPSHPPGQRFEQCSSLCLRDVTPYPNGVSMEHGPTARGWGGGEAVR
ILARRITPDGKVQYLVEWGNVRVY
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgggggtagtcagtgaaggagaagatgtgttagcacggtggagtgatggactgctgtac
ctgggcaatgtcaaaagagtagatgtagtgaagcagtgctgcctggtcaggtttgaggat
aattcagagttttgggtcctcaggaaagacattcattcattctcagccagtggagaggaa
gtttgttgtgtctgtgacggaccgcctcttaaagagcctctcataaactgtctgaaatgc
cgccacggttatcatccacagtgccatactccaaccattgatcccgaggttgacagcaat
tcctggatctgccgccagtgtgtctttgctgttgcaaccaagagagggggagccttaaaa
cgagggcgcttcgcccgactcatgcagttaatgaaactgaggctgccctatcagctgtcg
tctttagactgggacccccagcacctgaccaaccagcaacagtgttactgctactgcgcc
ggacccggagagtggaatctgaagatgttgcagtgcggcagctgcggccagtggtttcat
gaagcctgcacacagtgcctgactaaacctctgctttatggagacaggttttatcagttc
cagtgctcgatctgcacaaacggaccagagaccattcagagactgcctatgacctgggta
gatctggcccatttggtgctgtatcatctgtctctgtgctgcaagaggaaatactttgat
tttgatcacgaaatcatgtccttcaccaacgagaactgggaatctttgctgctgggcacg
ttgtcagatacacccaagcaagatcgctgcaacaatctgctcaacgctttaaattcccac
aaagacaggttcgtctcgggcaaagagatcaagaagaaaaaatgtcttttcggccttcaa
gtgcgggctcctcccccgctgtcatctgactcatcgcccctcatcgctgaccagcctgtc
agcatcacacaccgcagaagccccctgtcactgccctgccagagacgaacggtggggcca
gagtctcgcaaatcaaagcggcgcatcgtggagacacagacctgtcagccaggagttact
gccaacaacatagatctggcgccatgctgccatggttatgtaggtggggcgaacgtctac
aacacccggaaatcagaggaagatctaagcttggggtctcctcccaagagaatgttagct
ctgtatcatccgtcatacaatggatctcagggtctgtctcgaactctgcatcactacagt
gctgaggacccttgccggcttccagcaccctgtctgccctactcgccctctcatccacct
ggccagaggttcgaacagtgctcctcactgtgcctgcgagatgttactccctacccaaac
ggagtgagcatggagcacgggcccacagcgagaggctggggtggcggggaggccgtcagg
attctggccagacgcatcacgccggatgggaaggtccagtacctggtggagtgggggaac
gtgagagtctactag

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