Astyanax mexicanus (Mexican tetra): 103024937
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Entry
103024937 CDS
T05042
Symbol
phf1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103024937 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103024937 (phf1)
03036 Chromosome and associated proteins [BR:
amex03036
]
103024937 (phf1)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
103024937 (phf1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103024937 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
ASH2L-like_WH
DUF4537
Chromo
PHD_2
Motif
Other DBs
NCBI-GeneID:
103024937
NCBI-ProteinID:
XP_022524407
Ensembl:
ENSAMXG00000024614
LinkDB
All DBs
Position
1:114666595..114703814
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AA seq
504 aa
AA seq
DB search
MGVVSEGEDVLARWSDGLLYLGNVKRVDVVKQCCLVRFEDNSEFWVLRKDIHSFSASGEE
VCCVCDGPPLKEPLINCLKCRHGYHPQCHTPTIDPEVDSNSWICRQCVFAVATKRGGALK
RGRFARLMQLMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYQFQCSICTNGPETIQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFTNENWESLLLGTLSDTPKQDRCNNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLSSDSSPLIADQPVSITHRRSPLSLPCQRRTVGPESRKSKRRIVETQTCQPGVT
ANNIDLAPCCHGYVGGANVYNTRKSEEDLSLGSPPKRMLALYHPSYNGSQGLSRTLHHYS
AEDPCRLPAPCLPYSPSHPPGQRFEQCSSLCLRDVTPYPNGVSMEHGPTARGWGGGEAVR
ILARRITPDGKVQYLVEWGNVRVY
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgggggtagtcagtgaaggagaagatgtgttagcacggtggagtgatggactgctgtac
ctgggcaatgtcaaaagagtagatgtagtgaagcagtgctgcctggtcaggtttgaggat
aattcagagttttgggtcctcaggaaagacattcattcattctcagccagtggagaggaa
gtttgttgtgtctgtgacggaccgcctcttaaagagcctctcataaactgtctgaaatgc
cgccacggttatcatccacagtgccatactccaaccattgatcccgaggttgacagcaat
tcctggatctgccgccagtgtgtctttgctgttgcaaccaagagagggggagccttaaaa
cgagggcgcttcgcccgactcatgcagttaatgaaactgaggctgccctatcagctgtcg
tctttagactgggacccccagcacctgaccaaccagcaacagtgttactgctactgcgcc
ggacccggagagtggaatctgaagatgttgcagtgcggcagctgcggccagtggtttcat
gaagcctgcacacagtgcctgactaaacctctgctttatggagacaggttttatcagttc
cagtgctcgatctgcacaaacggaccagagaccattcagagactgcctatgacctgggta
gatctggcccatttggtgctgtatcatctgtctctgtgctgcaagaggaaatactttgat
tttgatcacgaaatcatgtccttcaccaacgagaactgggaatctttgctgctgggcacg
ttgtcagatacacccaagcaagatcgctgcaacaatctgctcaacgctttaaattcccac
aaagacaggttcgtctcgggcaaagagatcaagaagaaaaaatgtcttttcggccttcaa
gtgcgggctcctcccccgctgtcatctgactcatcgcccctcatcgctgaccagcctgtc
agcatcacacaccgcagaagccccctgtcactgccctgccagagacgaacggtggggcca
gagtctcgcaaatcaaagcggcgcatcgtggagacacagacctgtcagccaggagttact
gccaacaacatagatctggcgccatgctgccatggttatgtaggtggggcgaacgtctac
aacacccggaaatcagaggaagatctaagcttggggtctcctcccaagagaatgttagct
ctgtatcatccgtcatacaatggatctcagggtctgtctcgaactctgcatcactacagt
gctgaggacccttgccggcttccagcaccctgtctgccctactcgccctctcatccacct
ggccagaggttcgaacagtgctcctcactgtgcctgcgagatgttactccctacccaaac
ggagtgagcatggagcacgggcccacagcgagaggctggggtggcggggaggccgtcagg
attctggccagacgcatcacgccggatgggaaggtccagtacctggtggagtgggggaac
gtgagagtctactag
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