Astyanax mexicanus (Mexican tetra): 103025144
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Entry
103025144 CDS
T05042
Symbol
dync1li1
Name
(RefSeq) cytoplasmic dynein 1 light intermediate chain 1 isoform X1
KO
K10416
dynein cytoplasmic 1 light intermediate chain
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04145
Phagosome
amex04814
Motor proteins
amex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103025144 (dync1li1)
09142 Cell motility
04814 Motor proteins
103025144 (dync1li1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103025144 (dync1li1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103025144 (dync1li1)
03036 Chromosome and associated proteins [BR:
amex03036
]
103025144 (dync1li1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103025144 (dync1li1)
Membrane trafficking [BR:
amex04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
103025144 (dync1li1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
103025144 (dync1li1)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
103025144 (dync1li1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DLIC
GTP_EFTU
ATP_bind_1
ABC_tran
PduV-EutP
AAA_16
AAA_22
nSTAND3
NACHT
AAA_29
nSTAND_NTPase5
ATPase
AAA_14
TsaE
AAA_7
DEAD
SRP54
Motif
Other DBs
NCBI-GeneID:
103025144
NCBI-ProteinID:
XP_049331513
Ensembl:
ENSAMXG00000005599
LinkDB
All DBs
Position
3:63369799..63404372
Genome browser
AA seq
498 aa
AA seq
DB search
MATAGRSALLSGSLSGSSGAADSHNPEEDDGQNLWSSILSEVSTRSRSKLPTGKNVLVLG
EVGSGKTTLVAKLQGVEEYMKGRGLEYLYFNVHDEDVDDHARCNAWVLDGDLYHKGLQKF
ALSVENLSDSLVLFVVDLSRPWLALDSLQKWASVVRDYLDKLRVPPETLRELEHRLVKQF
QEYVEPGSDMESVPQRRNPESEEESIVLPLGENTLTHNLGIPLVVVCTKCDAISTLEKEH
DYRDEHLDFIQSHIRRFCLQYGASLLYTSMKENKNLDLLYKYLVHRLYGFPFNFPAQVVE
KDSVFIPSGWDNEKKIAILHENFQSVKADDNFEDVIVKPPVRKFVHEKEIQAEDDQVFLV
KLQTLLSKQPPVSAGRPVDASNRAPTGSPRTTNRSAAANVANVMPMQSGTKKIDPNMKGG
QTSEGVLANFFNSLLTKKAGSPGPGGQPTGGGSNTPGTVRKSGSKLGLTDVQAELDRISN
KSDLDSSANTPPAENDES
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcggggaggagcgcactgctgtccggcagcctgagcgggagcagcggcgcc
gcggacagccacaacccggaggaggacgacggacagaacctgtggtcctccatcctcagc
gaggtctccacccggtcccgctccaaactgcccaccgggaagaacgtgctggttctgggt
gaagtggggtcgggtaagacgacactggtggctaaactgcagggagtggaggagtatatg
aaggggcggggcttggagtatctatacttcaacgtgcacgacgaggacgtagacgatcac
gcacggtgtaacgcctgggttctggatggagatctgtatcataaaggtctgcagaagttc
gctctgtcggtggagaacctgtccgactcgctggttctgttcgtggtggatctgtctcgg
ccctggctcgctctcgactctctgcagaaatgggccagcgtggtccgggactacctggat
aaactgcgggttcctccagagaccctcagagagctggagcacagattggtgaagcagttt
caggagtacgtggagccgggcagtgatatggaaagtgttcctcagaggagaaacccggag
tcggaggaggagagcatcgtcctgccgctgggggaaaacacactcacacacaacctgggc
attcctctggtggtggtctgcactaagtgtgatgcgatcagcactctggagaaggagcac
gattacagagacgagcacttagacttcatccagtcacacatccggcgattctgcctgcag
tacggagcgtcactactctacacatccatgaaggagaataaaaatctagacttgttatat
aaatacctcgtccacaggttatacggctttccattcaacttccccgcccaggtggtggag
aaggattcagtgtttattccgtcgggatgggacaatgaaaaaaagattgccatcctacat
gaaaatttccagtcagtaaaagcagatgataactttgaagatgtaatagtgaagcctcct
gttagaaagtttgtacatgagaaggaaatccaagcagaagatgaccaagtgtttctcgtt
aagttgcagactctgttatccaaacagcctccagtctctgcaggaaggccagtggacgct
tcgaacagagctcccaccggctcgcccaggacgaccaatcgctcggcggcagctaatgtg
gctaacgtcatgcccatgcaatcaggtaccaagaagattgatcccaacatgaaaggaggt
cagacgagcgagggcgtgctggcgaacttctttaacagcctcctgactaagaaagcggga
tcgccgggtccgggggggcagcccacggggggagggagcaacacgcccggaacagtccgt
aaatcaggctctaagctggggttgaccgacgtccaggcggagctggaccggatttccaac
aaatcggacctagattcctccgcgaacacgccccctgccgaaaacgacgaatcctga
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