Astyanax mexicanus (Mexican tetra): 103027246
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Entry
103027246 CDS
T05042
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103027246 (brwd3)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103027246 (brwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
103027246
NCBI-ProteinID:
XP_022536597
Ensembl:
ENSAMXG00000007033
LinkDB
All DBs
Position
1:34599969..34625039
Genome browser
AA seq
1773 aa
AA seq
DB search
MASEGYSQIEAELYFLIVRFLQAGPCKKAAQILLEELEENEIIPQRWSWDGRQFERNFSD
WVALNRHIPADYLLRVCNQVCPLVDKHVPPSVPGVRSLLGTGRQSLLRTAKSCAYTVWTG
SSVAALHRGRPPEPPVNFGKSPNVVSVMGARKITGAGRFGHVLPSCTYQHMKMHRRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDLAVNFENTLIAS
ASCDKVIRVWCLRTCAPVTVLQGHTASITSIQFSPCAPGTMRYLASTGADGMVCFWQWNN
LTMKFIDRPVKFTERSRPGVQISCCSFSTGGMFLATGGTDHVLRVYYLGSEVPIKLSDLD
SHTDKVNAVQFCNNSDRLRFVSGSRDGTARIWQYQQQEWKSITLDMSTKLPGSTAASGED
KSTKLVVTMVAWDRSDRTVITAVSNFLLKVWNSTNGQLLHILSGHDDEVYVLEAHPFDWR
IMLSAGHDGNIYIWDLSKGTKIRNYFNMIEGQGHGAVFDCKFSADGQHFACTDSHGHLLI
FGFGCSQPYEKIPDQMFFHTDFRPLIRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPHPP
RFQRLVPGRENCKEEQLVPQLGYMANGEGEVVEQVIGQQTVDEGQEESPLDSLIRQLQNQ
QDERMNSGDQNADGEAAGGPLSPPNVGLRRSGQVEGVRQMHNNAPRSQMATERDLLAWSR
RVVVNEIPSGMFRVMEESRLAKGDLERFLYVTERKKKPVPTPTEPVGVSVRSLRRPLRKQ
QQKRHSYHTRSARERRRSSHARSRSGEDSLGESESEAEQEEEQAENSDRSSESEAQWENA
TSSSDSSSEYSDWTADAGINLQPPKRTTRRPARVAQSSSSEDEGEGQGEGEERSRKKKEQ
EEEKKKKPKQTKQKNVPAGQLEEWHPPSWIMETIPRRSPFLPQMGDELIYFRQGHQAYVR
AVRRAKSYSINPQKQPWNRLDLRDQECVKVVGIKYEVGPPTLCCLKLAFLDPLSGKMTGE
SFSLKYHDMPDVIDFLVLQQFYSEAKERNWQPGQRFRSIIDDAWWFGSVENQQPLQAEYP
DSLFQCYVVRWDNGEREKMSPWDMEPIPDEAPLPDEIGDSVPVTEEELQALLYQPQDGEW
GTQTRDEECERVIAAIDQLFTLDIAKAFSCPVDLRDYPLYCTVVAYPTDLSTIRMRLVQR
FYRRISALMWEVRYIEHNARTFNEPQSPIVTAAKALTDVLLRFIGDQSCNDILDVYNKIK
TELSSAAEEEEEVDVDSDTPGTSTGQKKRGVVLDVQAWLVKCKELMRKMIASPDSEPFRQ
PVDLFAYPDYRDIIDTPMDLGTVSETLMAGNYENPMEFAKDVRLIFSNSRAYTPNKKSQI
YSMTLSLSASFENQIIAIISDYKSAVQNQRRCQQRLSCSKKMQDSPDSPKGKHKPAKKTK
TPKQPPKSRSQQPSHSDLNPALVDEDSQPSSSSSSSSSSLSSAMTSLPSVPPGAKRVTRS
RTTPRKTDAQCNGPLINGGRTKRRRSTSLGQQEASDSENSDSSSSSSSSSSSSSSSPSSS
SSSESEASDAEVGFPDGGDHDYSKAPRLALSRKGKMTSTVASSIAAIAKRKRRAAEEETA
KSLKRVCRELVQELVQTEEEEEEEEEVDDDNKEDGDEEEEEPEEEEEPEEEEEHEQEEEE
EEEEEDEEDEDEEGMASAQSEQVSTRGGKTNQRTAKSGRVNTRNQGRRTVVYNDDSEEEG
PTTDPLNLGMSRSGRVRRMTERARVSHLMGWTH
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggagggttattctcagattgaagcggagctctactttctgatcgtcaggttt
ctccaggcgggaccctgtaagaaagcggcgcagattctgctggaggaacttgaggagaac
gagatcatcccgcagcgctggagttgggacgggaggcagtttgagcgaaacttctcggac
tgggttgctctgaaccggcatattccagcagattacctgttgcgtgtctgtaaccaggta
tgtccactggtggacaaacacgttcctcccagcgtacctggggttcgcagtctgctgggt
actggacgacagtcacttctgcgtacagcaaagagttgtgcgtacacagtatggactgga
tcatcagttgctgccctccacagaggacgaccacccgaacctcctgtcaactttggcaaa
tcgccgaatgttgtgtccgtcatgggtgcgcgcaagattaccggtgcagggaggtttggc
cacgttcttccttcgtgcacctaccagcacatgaagatgcacaggaggatcctgggacat
ctttcttcagtgtactgtgtagcattcgaccggacaggcagacgcatctttacgggttct
gacgactgcctagtaaagatttgggcgacagatgatgggcggctgttggcgacccttcgg
ggtcacgcggcagagatttcagatttggcagtgaattttgagaacacactgattgcatct
gcaagctgtgataaggtcatccgggtgtggtgtctccgaacctgcgcgccagttacagtc
ttacagggacacacagcttccattacttccatacagttttctccatgtgcccctggtacc
atgcgctacctggcttccacaggagccgatggtatggtctgcttctggcagtggaacaac
cttaccatgaagttcattgacaggcctgtgaagtttactgagcgctctcgtccaggggtt
caaatatcctgttgttccttcagtactggtgggatgttcctggccactggaggaactgat
catgtgcttcgagtttattacctgggcagtgaagtacctataaaactgtcagatttggac
tctcacacggataaagtcaacgcagtgcagttttgcaacaatagtgaccgcttgaggttt
gtgagcggtagtcgtgatggtacagcacggatctggcagtaccagcagcaggagtggaag
agcattactttagacatgagcaccaaactgcctggaagcactgcggcatcaggagaggac
aagtcaaccaagctggtcgttacaatggtggcttgggaccgtagtgaccgaacagtcatc
actgctgtctccaacttcctcctaaaagtctggaactccactaatggccagctactgcac
atactctcgggtcatgatgatgaagtgtatgtgctggaggctcatccttttgattggagg
ataatgctgtcagctggtcatgatggaaatatttacatctgggacctcagcaaaggcacc
aagatacgaaactacttcaacatgattgaaggccaaggccatggtgcagtgtttgactgc
aagttttctgctgatggccagcactttgcctgcacagactcgcatggacatttgctcatc
tttgggtttggttgcagccaaccctatgagaagattccagaccagatgttcttccatacg
gatttccggccattgattcgggattccaataactacgttctggacgagcagacacagcag
gccccccatctcatgcccccacctttcctagtggacgtggatggaaaccctcacccgcca
cggttccagcgcctggttcctggcagagagaactgcaaggaggagcagttggtgcctcag
ctaggctacatggctaacggtgaaggggaggttgttgagcaggtgattggccagcagaca
gtggacgagggtcaggaagaaagccctttggacagtttgatcagacaacttcagaaccag
caagatgagagaatgaactcaggagaccaaaatgcagatggagaagcagcaggtggtccc
ttgtccccaccaaacgtaggcctgcgtaggagtgggcaggtggagggggttcgtcaaatg
cacaacaacgccccccgcagtcagatggctacagagagagacttgctggcatggagtcgt
cgtgtggtcgttaacgaaatcccatcagggatgttcagggttatggaggagagtcgactg
gccaaaggtgatttggaacgttttttgtacgtcacagagaggaaaaagaagcctgttcct
actccaactgagccggtaggcgtctctgttcgttctctgcggagaccactgagaaaacag
cagcaaaagagacactcgtatcacacacggtccgcccgcgagaggaggaggagctctcac
gcacgctctcgctcaggagaagacagccttggggaatcagagagtgaggctgagcaggag
gaagagcaggcagagaacagtgaccgctcatctgaaagcgaggctcagtgggagaacgcc
accagttctagtgattcgtccagcgagtattccgattggacagcagacgcagggatcaac
cttcagcctcccaagcggacgaccagaaggccggctcgtgttgcccaaagcagcagctcg
gaggatgaaggggaggggcagggagagggagaagaacgaagtaggaaaaagaaagagcag
gaagaggagaaaaagaagaaacccaaacaaacaaaacaaaaaaacgttcctgccggtcag
cttgaagagtggcatcccccgtcctggatcatggagacgatacccaggcgatctcctttc
ctacctcagatgggggacgagctgatatactttcggcagggacaccaggcatatgtccgt
gcagtgcgtcgtgccaaatcatacagtatcaacccccagaaacagccctggaacagactg
gacctcagggatcaggagtgtgtaaaggtggtgggtattaagtatgaggttggtcccccc
acactctgttgcctcaaactggccttcctggacccgctctcagggaagatgaccggcgag
tccttcagcttgaagtatcatgatatgcctgatgtcatagattttctggtgctacaacag
ttttacagtgaggccaaagaacgcaactggcaacctgggcagcgtttcaggagtattata
gacgatgcctggtggtttgggtcggtggagaaccagcaaccattacaggctgaataccca
gacagccttttccagtgttatgttgtcaggtgggataatggagaaagagaaaaaatgagc
ccatgggacatggaaccaatacctgatgaagctcctctccctgatgagattggagacagt
gtcccagtaacggaggaggagcttcaggcactgctgtatcagccacaggacggagagtgg
ggcacgcaaacacgtgatgaagaatgcgagagagtcatcgcagctatagaccagctgttc
acactagacattgcgaaggcgttctcttgtcctgtggatttgagagactaccccctgtac
tgcactgtggtggcctatcctactgacctcagcaccatcagaatgagacttgtacaacgc
ttctacaggaggatttctgcactgatgtgggaggtgaggtatattgagcacaacgcacga
acatttaacgagccacagagccccatcgtcacggcagccaaagcactcactgatgtcctg
ctacgatttattggagatcaaagctgtaatgacatcttggatgtgtacaataaaatcaag
acggagctcagcagtgctgctgaagaagaggaggaagtagacgttgactcggacactcca
ggcacgtctactggtcagaagaagcgtggtgtggttctggacgtgcaggcatggttagtg
aagtgtaaggagctgatgaggaaaatgatcgccagtccagactctgaacccttccggcaa
cctgttgatctctttgcatatccggactacagagacatcattgacactccaatggacctg
ggcacagtctcagaaactctgatggctgggaattatgagaaccccatggagtttgctaaa
gatgtcagattaatcttcagcaactccagagcctataccccgaacaagaagtcccagatc
tatagtatgacactcagtctgtcagcttccttcgagaaccagatcatcgccatcatctct
gattacaaatcagccgttcagaaccagagaagatgccagcagagactcagctgcagcaag
aaaatgcaggactctccagatagccccaaagggaagcacaagccagcaaagaaaacaaaa
actcccaagcagccccccaagagccgctcacaacagccttctcatagtgatttgaatcca
gctttagtcgatgaagacagccaaccatcttcgtcatcatcgtcgtcatcatcatcacta
tcatcagcaatgacttcattaccttcagtgccaccaggagctaaaagagtcacacgtagt
agaactacacccagaaaaacagatgctcagtgcaacgggccacttattaatggcggccgg
acaaagcgcagacgatccacctcgctgggacagcaagaagcttcggactcagaaaactct
gactcttcgtcgtcatcttcttcatcttcatcttcctcctcttcttcaccttcatcatcg
tcttcctctgagagtgaggcaagcgatgctgaagtgggctttcctgatggtggcgaccac
gattacagcaaagcgccgaggctggccctcagccggaaagggaaaatgacatctacggtg
gcctctagcattgcggctatcgctaaacgaaaaaggagagctgcagaagaggaaacagca
aaaagtcttaaacgggtttgcagggaactggtacaagaattggtacagaccgaagaggag
gaggaggaagaggaggaggtggatgacgacaacaaagaagatggtgatgaggaagaggag
gagcctgaggaggaggaagaacctgaagaggaagaagaacatgaacaggaggaggaagag
gaggaggaggaggaggatgaggaggatgaggatgaagaagggatggcatcggcacagtca
gagcaggtttccactagaggtgggaagacgaatcagaggacggcaaaatcggggcgggta
aacacccgcaaccaagggcgacggaccgtagtgtacaatgatgattccgaggaggagggg
ccaacaactgacccactgaacctgggcatgtcccgttctggaagagtccgccggatgacc
gaaagagccagggtcagccacctaatgggctggacacactga
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integrated database retrieval system
