Astyanax mexicanus (Mexican tetra): 103029373
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Entry
103029373 CDS
T05042
Symbol
tnfrsf21
Name
(RefSeq) tumor necrosis factor receptor superfamily member 21 isoform X1
KO
K05157
tumor necrosis factor receptor superfamily member 21
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
103029373 (tnfrsf21)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
amex04050
]
103029373 (tnfrsf21)
04090 CD molecules [BR:
amex04090
]
103029373 (tnfrsf21)
Cytokine receptors [BR:
amex04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
103029373 (tnfrsf21)
CD molecules [BR:
amex04090
]
Proteins
103029373 (tnfrsf21)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
103029373
NCBI-ProteinID:
XP_007245461
Ensembl:
ENSAMXG00000010169
UniProt:
A0A8T2ME38
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Position
1:59186661..59219329
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AA seq
662 aa
AA seq
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MLLPPQRCSSTCGRGTPARASAAGHVLRRTAGSEERKMTPICLCVTLLCALVGDIQASAP
DPLVTEELLSARQYRHIDPATGSQLVCDKCPAGTYVLSHCTESSVRECSRCPEGTFTRGE
NGVQQCHRCQKPCQTPFVEKTPCTATSGRTCACPPGSFAQAGECRPHSLCQPGWGVRKQG
SETEDVRCRRCPRGTFSAVASNTLRCQTHTDCQAQHLTLVLKGTEDRDNVCGNPPTGPAP
VSPSSHSPTDSAQKAVPTASTAIKDLPTQLPSSPQMALDFADVATLTSISGDSPEDTEGP
SAPTQDPLSWAHNLPTSHNPQPANQPAMDLLSEAKGQGLAYRPIRRGSPRPSMHKHFDIN
EHLPWMIVLLLLLVLVVIVVCSIKRSSRVLKKGPRQDPSSIMEKAIHKKPSSPAHIKEKW
IYYSNGQGVDILKLVAAQIGSQWIDVYQSLANATEREVAAFSNGYSADHERAYAALQHWT
IRDSDANLAKLINALHRHRRIDVVEKIRGIMEDNPQFDLNQLMTSVNVSQCVSPSHKPLE
VPGLVVEHSPLDRKGFFTDESEPLLRCDSTSSKDSALSRTGSFITKEKKDTVLRQVRLDP
CDLQPIFDDMLHILNPEELHVIEEIPMAEDKLDRLFEIAGVKSQDASQTLLDSVYSHLPD
LL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcccgccgcagagatgctcctccacctgtggtagaggaacccccgcccgcgcg
tcagcagctggacatgttctgaggagaaccgctgggtctgaagagaggaaaatgactcct
atctgcctgtgtgtgacgctactctgtgctctggtaggagatatccaggcctcagccccc
gaccccctggtcacggaggagctactgtcagctcgtcagtaccgccacatcgacccggcc
actggtagccaattggtgtgtgacaagtgcccggcaggcacctacgtgttgtcccactgc
acagagagcagcgtgcgagagtgcagtcgctgcccagagggcaccttcacacggggtgag
aatggtgtgcagcagtgccaccgctgccaaaaaccctgccaaacaccctttgttgagaag
accccctgcacggccacttcgggccgaacatgtgcgtgccctccaggcagttttgcccag
gcgggtgagtgccgcccccattcgctgtgccagcccggctggggcgtccggaaacagggc
agcgagacggaggatgtgcgttgccgcagatgcccacgggggaccttctctgctgtggcc
tcaaacacgctgaggtgccagacgcacacggactgccaggcacaacatctgacgctggtg
cttaagggcactgaggacagggacaacgtgtgtgggaatccgccaacaggcccagcccca
gtttccccatcctcacactctcccactgactcagcacagaaagcagtgcccacagcatct
acagccatcaaggatttaccaacacagcttcccagcagtccacaaatggccttagacttt
gcagacgttgccacactcacaagcatctcaggtgacagcccagaagacacagagggccca
agtgctcccacgcaggatcctttgagttgggctcacaacctcccaacatcacacaatccc
cagcctgctaatcagccggcaatggacctgctgtcagaggctaagggtcagggactggcc
tacaggcccatccggagaggctctccacggcccagcatgcacaagcacttcgacatcaac
gagcacctgccctggatgattgtgctgctgctcctgctggtgctggtggtgatcgtggtg
tgcagcatcaaacgaagctctcgggtgctcaagaagggtcccagacaggaccccagcagc
atcatggagaaagccattcacaagaagcccagctctcctgcacacatcaaggagaagtgg
atctactactccaatggccaaggtgtggatatcctgaagctggtggcagctcagattggc
agccagtggattgacgtgtaccagtcactggctaacgccaccgagcgagaagtggcggcc
ttctccaatggctactcggccgaccatgagagggcttatgctgccctacagcactggacc
atccgtgacagtgatgccaacctggccaagcttatcaacgctctccaccgccaccggcgc
atcgatgtggttgagaagatccgtggcatcatggaagacaatcctcagtttgacctgaac
cagctgatgacctctgtgaatgtaagccaatgtgtcagtcccagccataagcctttggaa
gtgcctggcttggtggtggagcattcaccgctggaccgcaagggcttctttactgatgaa
tctgaaccgttgttgcgctgtgattccacctccagcaaggactccgccctcagccgcaca
ggctcctttattaccaaagagaagaaggacacagtgctgcggcaggtgcgcctggacccg
tgcgacctgcagcccatctttgacgacatgttgcatattctcaaccctgaggaactgcac
gtcattgaggagatccctatggctgaggacaagctggaccgcctgtttgagatcgcaggg
gtcaagagccaagacgccagtcagaccctcctcgactctgtatacagccacctgcccgac
ctcttatag
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