Astyanax mexicanus (Mexican tetra): 103032249
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Entry
103032249 CDS
T05042
Symbol
sema5b
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-5B
KO
K06841
semaphorin 5
Organism
amex
Astyanax mexicanus (Mexican tetra)
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Gene cluster
GFIT
Motif
Pfam:
Sema
TSP_1
TSP1_spondin
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
103032249
NCBI-ProteinID:
XP_007227982
Ensembl:
ENSAMXG00000003356
UniProt:
A0A8B9M2V7
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Position
19:complement(29528377..29738451)
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AA seq
1101 aa
AA seq
DB search
MTALPRDVTSLAVSGLFLYLLIFGVPAVVSQSTPAPTEPTPTPAPQSRPECTRREHPIIS
IQALSPWISVFSHPGVRDFSQLTLDLSRNELIVGARNYLFRLNLSNISLIQATEWGPDED
TRRSCQSKGKTEVECQNYIRVLLVNKTEVMTCGTNAFQPLCITREVGNMSSVLERVNGVA
RCPYDPRHNSTAVVTESGELYAATVIDFSGRDPVIYRSLGGMPPLRTAQYNSKWLNEPQF
ISAYDIGLFTFFFLRENAVEHDCGKTVYSRVARVCKNDIGGRFLLEDTWTTFTKARLNCS
RSGEIPFYYNELQSTFYLPEQDLIYGIFTTNVNSIAASAVCAYNLSAITRAFNGPFRSQE
NPRSTWLPTPNPIPNFQCGTIEDKGPNDGLTERSLQDAQRLYLMNDVVQPVSVDPLVWQD
SMRFSKLVVDIVQGQDTLHHVMYIGTESGTILKALATSNKSLQGCYLEEMQLHPPDTREP
ILSLQILHGDRTLFVGLNDRVLKIPLARCSSYQTEQMCLDARDPYCGWDRKQRRCTTIED
SSNMSQWFQNITACPLRNQTMDGAYGPWAPWQPCNHDDGDGTSACLCRSRKCDSPAPQCG
GKSCEGPTIEVANCSRNGGWTPWSSWGQCSTSCEIGFEVRQRSCNNPSPRHGGRVCVGQA
REQRFCNEKVSCPQPIFWSSWSPWSKCSAECGGGVHSRSRNCENGNSCPGCALEYQACNL
ESCPEARRNTPWTPWVPVNITQGGARQEQRVRYICRAQLADPHELQLGKRKVETRFCPND
GTVACETDSLVDELLRTPGVRLTGSGWSSWETWSACSQDCAKGYRSRKRTCTSSDGKTTP
AACRGSPVEYQDCNPQPCPVKGAWSCWSPWSQCSVPCGGGHYQRTRGCTNPAPSLRGDIC
IGLHTEEALCNTHACQGGWMAWTVWSACDDTGLQMRTRVCGTQSSTPCTGNGTQYRDCNE
IPVILPASGYDKDQQCGGFTLLHLIATGVSCFXGAGLLSFLVYVYCQRFHKPSQESAVIH
PTTPNHLNYKGNTTPKNEKYTPMEFKTLNKNNLLPDERTNFFPSPLQQTNVYTTTYYPAA
LGKYDYRPDSSPSPCRNYNHS
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgttgccacgggacgtgacttccctggctgtgtctggcctattcctctatctc
ctcattttcggcgtccctgctgtggtgtcccaaagtacccctgctcccaccgagcccacc
cctaccccggcaccgcagagcagaccggagtgtacccgaagagaacatcctatcatttct
attcaagctctcagtccctggatctctgttttctcccatcctggtgtacgagacttctca
caactcaccctcgacctcagcagaaatgagctaattgtaggagcaagaaactacctcttc
cgcctgaacttaagcaacatatcactaatacaggctacagaatggggcccagacgaagac
accaggaggtcctgtcagagcaaagggaagacggaggtggagtgtcagaactacattcga
gtgcttcttgtcaacaagacagaggtgatgacctgtggcaccaacgccttccagcctcta
tgcatcaccagagaggtgggcaatatgagcagtgtattagagcgagtgaatggagttgca
cgctgtccttatgatcctcgccacaactccacagcagtggtgacagagagcggagagctt
tacgctgccacggtcatcgacttctctggccgggatccagtcatctaccgcagcctgggg
ggaatgccgcctctcaggaccgcccagtacaactccaaatggctcaacgagcctcagttc
atctcggcctatgacatcgggctctttaccttcttcttcttgagggagaacgcagtagag
cacgattgtgggaagacagtgtactcacgagtggccagagtctgtaagaacgacatcggt
ggccgtttcctgttggaggacacctggaccacctttaccaaagccagactcaactgctca
cgctctggagagatccccttctactacaacgagctccagagcaccttctacctgcctgag
caggacctcatctatggcatctttaccaccaacgtgaacagtattgctgcgtctgcagtt
tgtgcgtacaacctcagcgccatcacgcgtgcgttcaacgggccattccgctcccaggag
aacccgcgctccacctggctgcccacccccaatcccatccccaacttccagtgtggcact
attgaagataaggggcccaatgatggcctcaccgagcgaagcctgcaggacgcccagcgg
ctctacctgatgaacgacgtggtccagccggtgtctgtggacccgctggtgtggcaggac
agcatgcgcttctccaagctggtggtggacatcgtacagggccaggacaccctgcatcac
gtcatgtacatcggcacagagtctgggaccattctgaaagctctggccacctccaataag
tctctgcaaggctgttatttggaggagatgcagctccaccccccggacacaagggagcca
atcttgagtctgcagattctccatggagacaggactctttttgtggggctgaatgaccgg
gtgctaaaaattcccctggctaggtgctccagctaccaaacagaacaaatgtgtttagat
gccagggacccgtactgtggatgggacaggaagcagcgccgctgcaccactattgaggac
agctccaacatgagccagtggttccagaacatcacagcctgccctctgcggaaccaaacc
atggacggtgcttatggtccctgggccccgtggcagccttgcaaccacgatgacggcgat
ggcaccagtgcttgcctgtgtcgctcgaggaaatgtgacagtcctgctccccagtgtgga
ggcaaaagctgcgagggtccgacgattgaggtggccaactgctcgagaaatgggggctgg
accccgtggtcatcgtggggtcagtgcagtaccagctgtgagatcggcttcgaggtgcgt
cagcgctcctgcaacaacccctcgcccagacacggcggccgagtgtgtgtgggccaagcc
agagagcagagattctgcaatgagaaggtatcatgtcctcagcccatcttctggtcgtca
tggtcaccctggtccaagtgcagcgctgagtgtggaggaggagtgcactctcgctccagg
aactgcgagaacggaaacagctgtccgggctgcgcactggagtatcaggcctgtaatctg
gagtcgtgtccggaggcgaggaggaatacgccatggactccgtgggtgccggtgaatata
actcagggtggagcgcggcaggagcaaagagtgcgctacatctgcagggcacagctagcc
gacccacacgagctgcagctgggcaaacgcaaagtggagacacgcttctgccccaacgac
ggcacggtcgcctgcgaaacggactctttagtggacgagctgctgaggactcccggggtg
aggctgacgggctccggctggtcttcgtgggagacgtggtcagcgtgcagtcaggactgc
gctaaaggctaccgcagccgcaaacgcacctgcaccagcagcgacggcaagaccacaccg
gccgcctgcaggggctcacctgtggaatatcaggactgcaacccccagccatgcccagtg
aaaggcgcctggtcttgctggtctccgtggtcgcagtgttcagtgccctgtggtggaggg
cactaccagcggacacgcggctgcaccaaccctgcccccagcctccgaggggacatctgc
atcggcctgcatacagaggaggcgctgtgcaacacacatgcctgccagggtggctggatg
gcctggactgtgtggtcagcatgtgacgacacgggtctgcagatgcgtactcgagtgtgt
ggtactcagagctcaacgccgtgcacgggaaacggcacccagtacagagactgcaatgaa
atcccagtgattctgcctgcatctggctacgataaggaccagcagtgtgggggtttcact
ctgctgcacctgatagccaccggtgtgtcgtgtttcnctggcgcaggcctgctgtccttc
ctggtatacgtgtactgccagcgcttccacaaaccctcacaagagtctgcagtcatccac
cctactactcctaatcacctcaactacaagggaaacaccacgccaaagaacgagaagtac
acacccatggagtttaagacgctgaacaagaacaatcttctgccagacgaaagaaccaac
ttcttcccatcaccgctccaacagaccaacgtctacaccaccacctactaccccgcagcg
ctgggtaaatacgactaccggcctgactcttcgccctcgccctgcagaaactacaaccac
agctga
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