Astyanax mexicanus (Mexican tetra): 103034616
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Entry
103034616 CDS
T05042
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103034616 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103034616 (crnkl1)
03036 Chromosome and associated proteins [BR:
amex03036
]
103034616 (crnkl1)
Spliceosome [BR:
amex03041
]
Complex B
Other components
Prp19-related factors
103034616 (crnkl1)
Complex C
103034616 (crnkl1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103034616 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
103034616
NCBI-ProteinID:
XP_007255505
Ensembl:
ENSAMXG00000018334
UniProt:
A0A8B9KEP7
LinkDB
All DBs
Position
1:84189643..84197018
Genome browser
AA seq
742 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLRKRKGFEDHIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNVTLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYSYMEEMLGNVAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKARTIYERFVIVHPEIKNWIKYARFEDKHGYIAHARKVFERA
VEFFGEEHIDENLFVAFARFEEKQKEFERVRVIYKYALDKIPKQQAQELFKNYTVFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADVDTVREVYERAIANMP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQF
EIRQKNLQNARRGMGSAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFGPENCTT
WIKFAELETILGDAERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDKTRELYKRL
LQRTQHVKVWISYAQFELSVDSEDRLQRCRQVYEESNKSLRNCEEKEERLMLLESWRDFE
QEFGTFANKDRVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKKQQQEEPEPQEEDEAETEEIDAPSKPKEDEETEIQEPKDMYDDRDDSVSSTSSSDS
ESDEEKSEGRKENEKTDSAEKE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccgctgctgggaaacagagaatacccaaagtggccaaggtgaaaaataaa
gccccagcagaggtgcagataactgctgagcagcttctgagagaagccaaggagagagaa
ctcgagcttcttcctccaccacccaaacagaagatcactgatgaagaagagttaaatgac
tacaagttacgaaaacgcaagggatttgaagaccatatcagaaagaacaggactgtcata
agcaactggataaagtacgcacaatgggaggagagtctgaaagaaatccagagagctcgc
tctatttacgagcgagcgctggatgtagatcaccgcaatgtcacactgtggctgaagtat
gccgaaatggagatgaagagtcgccaggtcaaccatgctcgcaacatctgggaccgagcc
ataaccatcctgccaagagtcaaccagttctggtacaaatacagctacatggaggagatg
ctggggaacgtagccggctgcaggcaggtgtttgaacgctggatggagtgggagccagaa
gaacaggcctggcactcgtacatcaacttcgagctgcgctacaaggaggtggacaaagcc
cgcaccatctacgagagatttgtgatcgttcatcctgaaataaagaactggatcaaatac
gctcgttttgaggataagcatggctacattgctcacgcgaggaaggtgtttgaaagagct
gtggagttctttggtgaagagcacattgatgagaacctctttgtggcttttgctagattt
gaggagaagcagaaagagtttgagcgggttcgggtcatatataaatacgccctggataaa
atccccaaacagcaggcccaggagctttttaagaactacactgtgtttgagaagaagttt
ggagacaggagaggaatcgaggatgtcattgtcagcaaaaggagatttcagtatgaggaa
gaggtcaaggcaaacccacacaactacgatgcctggtttgattacctgcgcctggtggag
agtgatgcagatgtggacacggttagagaggtgtacgaaagagccattgctaacatgccc
cccatacaggaaaagaggcactggagacgctacatttacctgtggatcaactatgccctg
tatgaggaactggaggtcaaggatcctgaaagaacacgacaggtgtatcaagcatgcctg
gaacttatccctcacaaaaagttcacctttgccaaaatctggctgctgtatggtcagttt
gaaattcgccagaagaacttgcagaatgccagacgaggcatgggttcagccataggcaaa
tgcccaaaaaacaagctgtttaagggctacatagagctggagctgcaactgagagagttt
gaccgctgcaggaaactgtatgagaaatatttggagttcggtccggaaaactgcaccacc
tggatcaaatttgctgagctggagaccatcctgggtgatgcagagcgagcacgtgccata
tttgagctggccatcggtcagccgaggctagacatgccagaggtgctgtggaagtcttat
attgactttgagattgagcaggaggagtatgacaaaacacgagagctttataagaggcta
ttgcagcggacacagcatgtcaaggtctggatcagttatgcccagtttgagctttctgtg
gacagtgaggacaggctgcagaggtgcaggcaggtgtatgaggaatccaataagagtttg
cgaaactgtgaggagaaggaggagcgactgatgctgctggagtcctggagagactttgag
caggagtttggtacctttgccaacaaggacagagtgaggaaattactgccagagaaggtg
aagaagaggaggaaactcacagcagaggatgggtcggatgcaggatgggaggaatattac
gactacatctttccagaggatgctgctaaccagcccaaccttaaactgctggcaatggcc
aaaatgtggaaaaaacagcagcaagaggagccggagccacaggaggaagacgaggcagaa
acagaggagattgatgccccttcaaagccaaaagaagacgaggaaacagaaatacaggag
cctaaagacatgtatgacgatcgtgatgacagtgtcagtagcactagcagcagtgacagc
gagagtgatgaagaaaagagtgaaggtagaaaagagaatgagaaaactgattctgcagag
aaagagtaa
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