KEGG   Astyanax mexicanus (Mexican tetra): 103034616
Entry
103034616         CDS       T05042                                 
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
  KO
K12869  crooked neck
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103034616 (crnkl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amex03041]
    103034616 (crnkl1)
   03036 Chromosome and associated proteins [BR:amex03036]
    103034616 (crnkl1)
Spliceosome [BR:amex03041]
 Complex B
  Other components
   Prp19-related factors
    103034616 (crnkl1)
 Complex C
    103034616 (crnkl1)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     103034616 (crnkl1)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_C HAT TPR_14 Suf TPR_19 TPR_CcmH_CycH TPR_17 Mad3_BUB1_I U3_assoc_6
Other DBs
NCBI-GeneID: 103034616
NCBI-ProteinID: XP_007255505
Ensembl: ENSAMXG00000018334
UniProt: A0A8B9KEP7
LinkDB
Position
1:84189643..84197018
AA seq 742 aa
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLRKRKGFEDHIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNVTLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYSYMEEMLGNVAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKARTIYERFVIVHPEIKNWIKYARFEDKHGYIAHARKVFERA
VEFFGEEHIDENLFVAFARFEEKQKEFERVRVIYKYALDKIPKQQAQELFKNYTVFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADVDTVREVYERAIANMP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQF
EIRQKNLQNARRGMGSAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFGPENCTT
WIKFAELETILGDAERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDKTRELYKRL
LQRTQHVKVWISYAQFELSVDSEDRLQRCRQVYEESNKSLRNCEEKEERLMLLESWRDFE
QEFGTFANKDRVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKKQQQEEPEPQEEDEAETEEIDAPSKPKEDEETEIQEPKDMYDDRDDSVSSTSSSDS
ESDEEKSEGRKENEKTDSAEKE
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggcgtccaccgctgctgggaaacagagaatacccaaagtggccaaggtgaaaaataaa
gccccagcagaggtgcagataactgctgagcagcttctgagagaagccaaggagagagaa
ctcgagcttcttcctccaccacccaaacagaagatcactgatgaagaagagttaaatgac
tacaagttacgaaaacgcaagggatttgaagaccatatcagaaagaacaggactgtcata
agcaactggataaagtacgcacaatgggaggagagtctgaaagaaatccagagagctcgc
tctatttacgagcgagcgctggatgtagatcaccgcaatgtcacactgtggctgaagtat
gccgaaatggagatgaagagtcgccaggtcaaccatgctcgcaacatctgggaccgagcc
ataaccatcctgccaagagtcaaccagttctggtacaaatacagctacatggaggagatg
ctggggaacgtagccggctgcaggcaggtgtttgaacgctggatggagtgggagccagaa
gaacaggcctggcactcgtacatcaacttcgagctgcgctacaaggaggtggacaaagcc
cgcaccatctacgagagatttgtgatcgttcatcctgaaataaagaactggatcaaatac
gctcgttttgaggataagcatggctacattgctcacgcgaggaaggtgtttgaaagagct
gtggagttctttggtgaagagcacattgatgagaacctctttgtggcttttgctagattt
gaggagaagcagaaagagtttgagcgggttcgggtcatatataaatacgccctggataaa
atccccaaacagcaggcccaggagctttttaagaactacactgtgtttgagaagaagttt
ggagacaggagaggaatcgaggatgtcattgtcagcaaaaggagatttcagtatgaggaa
gaggtcaaggcaaacccacacaactacgatgcctggtttgattacctgcgcctggtggag
agtgatgcagatgtggacacggttagagaggtgtacgaaagagccattgctaacatgccc
cccatacaggaaaagaggcactggagacgctacatttacctgtggatcaactatgccctg
tatgaggaactggaggtcaaggatcctgaaagaacacgacaggtgtatcaagcatgcctg
gaacttatccctcacaaaaagttcacctttgccaaaatctggctgctgtatggtcagttt
gaaattcgccagaagaacttgcagaatgccagacgaggcatgggttcagccataggcaaa
tgcccaaaaaacaagctgtttaagggctacatagagctggagctgcaactgagagagttt
gaccgctgcaggaaactgtatgagaaatatttggagttcggtccggaaaactgcaccacc
tggatcaaatttgctgagctggagaccatcctgggtgatgcagagcgagcacgtgccata
tttgagctggccatcggtcagccgaggctagacatgccagaggtgctgtggaagtcttat
attgactttgagattgagcaggaggagtatgacaaaacacgagagctttataagaggcta
ttgcagcggacacagcatgtcaaggtctggatcagttatgcccagtttgagctttctgtg
gacagtgaggacaggctgcagaggtgcaggcaggtgtatgaggaatccaataagagtttg
cgaaactgtgaggagaaggaggagcgactgatgctgctggagtcctggagagactttgag
caggagtttggtacctttgccaacaaggacagagtgaggaaattactgccagagaaggtg
aagaagaggaggaaactcacagcagaggatgggtcggatgcaggatgggaggaatattac
gactacatctttccagaggatgctgctaaccagcccaaccttaaactgctggcaatggcc
aaaatgtggaaaaaacagcagcaagaggagccggagccacaggaggaagacgaggcagaa
acagaggagattgatgccccttcaaagccaaaagaagacgaggaaacagaaatacaggag
cctaaagacatgtatgacgatcgtgatgacagtgtcagtagcactagcagcagtgacagc
gagagtgatgaagaaaagagtgaaggtagaaaagagaatgagaaaactgattctgcagag
aaagagtaa

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