Astyanax mexicanus (Mexican tetra): 103035223
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Entry
103035223 CDS
T05042
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103035223 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103035223 (slc6a11b)
Transporters [BR:
amex02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103035223 (slc6a11b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
103035223
NCBI-ProteinID:
XP_007248360
Ensembl:
ENSAMXG00000032111
UniProt:
A0A8B9KS07
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Position
24:13863779..13910689
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AA seq
617 aa
AA seq
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MTAEKTIPIINGKPDDAMDAEASNTNLVRSNDKKVVNERGQWNNKIEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEG
IGYATQVIEAHLNVYYVVILSWAIFYLLNCFTTELPWANCGHYWNTENCVDFNNASIENL
TNPYATSPVMEFWERRVLSISDGIEHVGKLRWELALCLLVAWIICYFCIWKGPKSTGKVV
YVTATFPYFMLVILLIRGITLPGAADGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICL
GCLTALGSYNSYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESG
PGLAFIAYPKAVTMMPWAPLWAFFFFVMLIFLGLDSQFVCVESLVTAVVDMYPKTFRVGY
RRELLILGMSVVSYLLGLTMLTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSD
RFYMNIEDMIGYKPIFFIKWCWKILTPGICSGIFLFFLIKYKPLKYNNVYTYPDWGYGIG
WTMAMSSMVCIPLGIIIQIWKTEGTFMERIKKLTTPAADLRMRGQLGAKSPYAVNDADAK
MRADGKISTITEKETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaaaagactattcccattataaatggcaaaccggacgacgcgatggacgcc
gaggcttccaacaccaacctggttcgcagcaacgacaagaaggtggtgaacgagagaggc
cagtggaacaataagatagagtttgtgctgtctgtggccggagagattatcggacttggc
aacgtctggaggttcccctacctctgttacaagaatggaggaggtgctttcttcgtgcct
tacgtcatcttctttgtctgctgtgggatcccagtgttcttcttggagacagcactgggc
cagttcaccagtgaagggggcatcacatgttggcgaaaagtttgtccactctttgaaggt
atcggctatgcgactcaagtcattgaagctcacctgaacgtgtattatgtggtgatcttg
tcgtgggccatcttctacctgttaaactgcttcacaacagaactaccctgggccaactgt
ggccactactggaacacagaaaactgtgtggatttcaacaatgccagcatcgaaaacctc
accaacccgtacgccacctcaccagttatggagttctgggagcgccgtgtgctcagtata
tctgatggaattgaacatgttggaaagctgcgctgggagctagccctgtgtctgctggtg
gcctggatcatctgttatttctgcatatggaaaggccccaaatctactggcaaggtggtg
tacgtcacagccaccttcccctacttcatgctggtgatcctgttgatccgtggaatcaca
ctgcctggtgcagctgatggaattaaattctacctgtatcctgatatctctcgtctctca
gacccacaggtgtgggtggacgctggtactcagatcttcttctcctatgctatctgtctg
ggctgtctgacggctcttggaagctacaacagctacaataataactgctacagggactgc
atcatgctgtgctgtttgaacagtggtaccagctttgtggcaggttttgccatcttctcc
gtcctgggcttcatggcctatgagcagaacgtgccgatcgaggctgtggcagagtcagga
cctggtctggcctttattgcttatccgaaggccgtaaccatgatgccctgggctcctctg
tgggcatttttcttcttcgtgatgctcatcttccttgggctggacagtcagtttgtgtgt
gtagagagtcttgtgaccgcagtggtggacatgtaccccaaaaccttcagagtgggctac
cgtagagaactgctcatcctaggaatgtctgtggtctcctatctgttgggtctaaccatg
ttaactgagggtgggatgtatgtgttccagctgttcgactcgtacgctgccagcgggatg
tgcctgctgttcgtggccatcttcgagtccatctgtattgggtgggtctacggcagtgac
aggttttacatgaacattgaggatatgattggctataagcccatcttcttcatcaagtgg
tgctggaaaatcctcacccccggcatctgctctggtatattcctgttcttcctgattaag
tataagcctctgaagtataataacgtctacacgtatccggactggggctatgggattggc
tggacgatggccatgtcctccatggtctgcattcctctgggcatcatcatccagatctgg
aaaacggaaggaaccttcatggagagaattaagaagctcaccaccccggccgccgacctg
aggatgagagggcagctcggggccaagagtccgtacgccgtcaacgacgctgatgccaaa
atgagggcggacggcaagatctccaccatcacagagaaggagacgcatttctaa
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