Astyanax mexicanus (Mexican tetra): 103035930
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Entry
103035930 CDS
T05042
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103035930 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103035930 (tprb)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103035930 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
103035930
NCBI-ProteinID:
XP_049336636
Ensembl:
ENSAMXG00000010256
LinkDB
All DBs
Position
1:complement(58413867..58438625)
Genome browser
AA seq
2368 aa
AA seq
DB search
MAAVLQQILERAEISKLPKAVQTKLEKYLSDQQTDTDVLRAHHEQFRVDSEQQYFDLEKR
CTESQDKFLSLTKDHHALKEDFSKLQEELKALQEKTKEHESLISKLESEKNQLSKVKDEL
EAEKRELVRTLERRSQEVESQSEDLNRLNDRLVETNAAKMQLQLKLDDLESSEVSIKYKE
KRMEQEKELLQSQLTWLNDELKSKSDELLALSRQKGSEILELKCSLNDKEDEVTRLQDQV
ASLKASHENLQKQAEDMICKLKEAKEQQASSEEKFRNELNANIKLSNLYKGAAADAEAKS
EELNQAVEELHKLLKEAGEAHKALEVKMAEMESGKQKEMTEFKEQISSLEKELENANELL
THTKHRAVSSTSAPILTEEQLTTMSPTAAAVSKIRPDMKLTEIYTAYIESQEHLQLERLE
NKRVNKYLDDIVQEVEAKAPILKRQREEFERTQKSVANLSAKLEQAVQEVQRLQRETDEA
NKRASVLERDNRRFETQLADMAQQVRVLLLELEEARGNHVLRDEDYLSSADVSSTSEVIS
QHLVTFRSVEELQSQNQRLLVALRELSEAQEKEEMESDSSKRSELQKSLEKAQAELEQLR
EQRAHQMQLAESIVRQRDMYRVLLAQATGVSFPQQGTTPEEFSLTSTPRRSPAVTPTTAT
PTGLVATSMESTETVEAKAALKQLQEVFGAYKREKAESGKVLGEQCEKLQDQVSELRSQN
SKISTQLEFASKRYEMLQDNVEGYRKEIASLREKTQKQATDVQKSEQTIHTLTQDLRAAN
EKLTMAESRVESLRKEKDMLKMVESRLSQEKESILSQQRSQNLLLTNLKSIQATLERSET
ETRQRLTAQVDKQEREISQLQKRLEHEVEQRHLLGRNQDMQLLDAKKQLESQTALYQRTK
EQLNAAQQELNTLQQQLSSGDHHRASPTAHTSHTGLQGSNSDVDELRGRLKQTESKAEDL
AERVKSTTASVEQYRAMCLSLEEALEKEKQVTEQVRSSVESQVMEAQEQHRQLEKKLLEV
EKEKQEIQEEKQKAVTAIEQQVSELRKSLNSLQAEHQDTLQKVALAASQEQQALLDSQEQ
ARLAAEAQDKYEREMILHAADVEALQAAKAQALKASQLRQQLEESAQRASAQLLEARVSW
EEQEKILKEEQGKVEARCVDLQKQNELLHEQIQSMSSKMATQLQQAASESSLNISLTEED
KSQEQLLEILRFVRREKEIAESRFEVAQGETLRHKLRVEHLERELKEVQQSLCAERERMQ
VTSKTLAQHDELMKKTETMNVLVETNKMLREEKEKMEQELQQAQAKITKLESDILPMQES
NSELSEKSGMLQAEKKLLEEDIKRWKARTQHLVSQQKDTDPEEYKRLHSEKEAHLKRIQQ
LTEDTSRLKAEAARSSGSVTTLQSQVQTLRESLGKVTVERDSLKKDIDAKALDLQEKVKT
ITQVKKIGRRYKTQYEELKVQHDQMVAEAASTPAQDQEAQQASAQELQSLRESLSQSETK
TRELEAQLETLNRTVGEREVESRSAQEQATRLQGELARMRQELQDKSSQEEQLRQQLADK
EERTRKALMLAKQKIKQATDGKDQLKRENDELKQQHDELRQQREELEVRVNALRSQYEGR
LSRQEKELRDLREQQERHGEQRDEPQEQGTSKTQEQQRTTEQRQISLKTTPATERGGAST
SEPPTANIKPTPLVATPSKQPATAGNKPTPRASIKPMITPAPVPIPTPTATVMPTTQLET
QETLQSSDAPMYGNASGLVRSTSPNVQTTLAQSMLSVQQSQTTAFVTPTQQQSLPPAEPA
NQEPATAAAVMMEAAPSTSQMERPTSTAVFGTVSATTSSTSSKRTREEELESMPTDTDPQ
EEPTEPPISKKLRIQRVGLEEDMLAEDSTEAESVVPGESQEAPDASEELELNFPILERSS
EEFGVSQEFFLPQEPEASHSQSQDEPDEPVIVIVSDSESEEEQEEETDDEEQDYQEEEEE
EEEEEEEEDDEEDDGGIGEEEEESNEGSGSGDPNEAYEEDTEGPDATDPGTETEESLGPL
ESQAFNMADGLSQTFCSDQPISSSVPRPPPSPRRPQHTFPQVNILAPPTQELGPPAQAQR
IPVRRQAAARAPQLSSGAATSAQLQQHFYEEEDRMVPSTPTLIGPHRSDCFSEAINSPQV
AGVPRFGLSLPDDVPQSSHSELGHLASQGGLGLYDSPLFLPVHEEESGGRSVPTTPLQVS
APVFLVSSSLLSGTSFSETLPSEVTELASQSVPMVSTSTPGLTASAGPSAVEEGEDLLLE
AGEDGSSAEAAMEPASQTEAEEPAQPSDEASLPSTSQEPSSSSADTSSSQPPKARTGSGR
LWTRARPSRSFVKRDGLGAMGVRGRFAR
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtgctgcagcagatactggagcgagctgagatctctaaactccccaaagcg
gttcagactaaactagagaagtatctgtccgaccagcagactgacacagatgtgctgaga
gcccaccatgagcagttccgcgtggacagcgaacaacaatattttgacttggagaagcga
tgcaccgagagtcaagacaagtttctgtcactgacaaaagaccatcatgccctcaaagaa
gatttttctaagctccaggaagagcttaaagctctacaagagaagacaaaggaacatgaa
tccttaatttcaaagctggaatcagagaagaatcaactttccaaagttaaggatgagctg
gaagcagagaagcgagagcttgtgcggaccctggagaggcgatcgcaggaggtggaaagt
cagagtgaggacttaaatcgtcttaatgaccgtctagtggagactaatgcagcgaagatg
cagctgcaactgaagctagatgatctggaatcctccgaagtctccattaagtacaaagag
aagcggatggagcaggagaaagaactcctgcaaagtcagttgacttggctgaatgatgag
ctgaaatctaaaagcgatgagctgcttgcgctctccagacagaaaggcagcgagattttg
gagctgaagtgtagtctaaacgacaaggaagatgaggttaccagattacaggatcaagta
gccagtctgaaagcctcccatgagaatcttcagaagcaggcagaggacatgatctgcaaa
ctaaaagaggccaaagaacagcaagccagttcagaggagaaattcagaaatgagcttaat
gcaaacatcaagctgtcaaacttatacaagggggcagcagctgacgcagaagctaagagt
gaggagttgaaccaggctgtggaggagctgcacaagctgctaaaggaggcaggagaagca
cacaaagctctggaggtgaagatggcggagatggaaagcgggaagcagaaagaaatgact
gagtttaaggagcaaatcagcagccttgagaaagagctagagaatgctaatgaactcctg
acacacacaaagcacagagctgttagcagcacatctgctcccattctcacagaagaacag
ctgaccaccatgtctcccacagcagcagcggtctccaagatcagaccagacatgaagctc
actgagatctacacagcatatatcgagtcccaggagcatctgcagcttgagaggctggag
aacaagcgtgtaaataagtatctggatgacattgttcaggaggtggaggccaaagcaccc
atcctgaaaagacagagggaggagtttgagcgcacccagaaatctgtggcaaacctatca
gccaagctggagcaagctgttcaggaagtacagcgtttgcagagggagactgatgaggcc
aacaagcgagcatctgtgctagaaagagacaatcggaggtttgagacacagttggctgat
atggctcagcaggtgcgagtgctgctgttagagcttgaggaggcccgcggaaatcatgtg
ttgcgtgacgaggactacctaagctcagcagatgtgagcagcacttcagaggtgatctcc
caacacctggtaaccttccgcagtgtggaggagctgcagtcccagaaccagcgtctactg
gtggccctccgagagctaagtgaagcacaggaaaaggaggaaatggagtctgacagcagc
aaacgcagtgagttgcagaagagcctggagaaagcccaggctgaactagaacagctgaga
gagcagcgtgctcaccagatgcagctagcagagtccattgtgcgtcagcgagacatgtac
cgtgtccttttagctcaggccacaggggtcagctttcctcaacaaggaaccactccagag
gagttctccctcacctccaccccccgacgatcccctgcggtcacacccaccactgccaca
cccactggactggtcgccacatcaatggagtctacagagactgtggaggccaaggctgcc
ctgaagcagctgcaagaagtttttggggcctataagagggaaaaggctgagagtggaaag
gttctgggtgagcagtgtgagaagctacaagaccaagtgtcagagctacgatctcagaat
tccaagatctccactcagctggagtttgcctccaaacggtatgagatgctgcaggataat
gtggagggttatcgcaaggagattgcctctctcagggagaagacccaaaaacaggccaca
gacgtccagaagagtgaacagaccatccacaccctcactcaagacctacgtgcagctaat
gagaagcttaccatggctgaatctcgagtggagagtctgcggaaggagaaggatatgctg
aagatggtggagtccagactgtcccaggaaaaagaatctattctttcacagcagcgcagc
cagaacctcctgctcaccaacctcaaatcaattcaggccactcttgaacgctcagagacg
gagactaggcagcgactgactgcgcaggtggataagcaggagcgagagatcagccagctg
cagaagagactggagcatgaggtggaacagaggcatctgctggggcgcaaccaggatatg
cagctcctggatgcaaagaagcagcttgaatcacagactgcactataccagaggaccaaa
gagcagctgaacgctgcccagcaggagctcaacaccctgcagcagcagctgagcagcgga
gaccatcatcgagcctcccccactgcgcatacgagtcatacaggattgcagggttctaac
tctgatgtggacgaattgcgtggccgtttgaagcagactgagagcaaagctgaggatctg
gctgagagagtcaagagcaccactgcctcagtagaacagtacagggccatgtgtctgagc
ctggaggaggccctggagaaagaaaaacaggtcactgaacaagtaaggtcttcagtcgag
agccaggtgatggaagctcaggagcagcatcgacagctggaaaagaagcttttagaagtt
gagaaggagaaacaagagattcaggaggaaaaacagaaagctgtgacagccattgagcaa
caggtgagtgagctgcgaaagagtctgaacagtttgcaggctgagcatcaggataccctg
cagaaggtggcactggcagcatctcaggagcagcaggccctgctggatagtcaggagcag
gcacgactggctgctgaggcccaggacaagtatgagcgggagatgattctgcatgctgct
gatgtggaggctctgcaggcagccaaagctcaggccctgaaagcctctcagctccgtcag
caactagaggagagcgcccagagagccagtgcacagctgctggaggcccgcgtgtcctgg
gaggaacaagagaagatcctcaaggaagagcaaggtaaggtggaggcacgctgtgtagac
ttgcagaagcagaatgagctccttcatgagcagattcagagcatgagcagtaagatggcc
acacagctacagcaggcagccagcgagagctccctgaacatttccttgactgaggaggac
aagtctcaggagcagctccttgagatcctcaggtttgtgcgccgggagaaggagatagca
gagtcacgttttgaggtggctcagggcgagactctaaggcacaaactgcgagtggaacac
ctagagcgggagttgaaggaggtacagcagtccctctgtgcagagcgggagagaatgcag
gtgacttctaagaccttggcccaacacgatgaactgatgaagaagactgagaccatgaat
gtgctggtggagaccaacaagatgttacgagaggagaaggagaaaatggagcaagagctc
cagcaagctcaagccaagataaccaagctggagtcagacatcttgcccatgcaggaatct
aactctgagctgagtgagaagagtgggatgcttcaagctgagaaaaaacttctagaagag
gacatcaagcgctggaaggcccgcactcaacacctggtgagccagcagaaggacacagac
cctgaagagtacaaacgtctgcactctgaaaaagaggcgcatctcaaacgcatacagcag
ctcacagaggacaccagtcggcttaaggcagaggctgccaggagtagcggatcggttact
acgttgcagtctcaggttcagaccttgcgtgagagccttggcaaggtgactgtggaaaga
gacagcctgaagaaagacattgatgccaaggctcttgatcttcaagagaaggtcaagacg
atcacacaagtcaagaagattggtcgtcgatacaaaacccagtatgaagagctcaaagtt
cagcatgaccagatggtggcagaagcggcctccactccagctcaagaccaggaggctcag
caggcctctgcacaggagctgcagagcctgcgagagtctctgagccagtcagaaaccaag
accagagaactggaggcccaattagaaaccctcaacagaacggtaggggagcgtgaggta
gagtcacgcagcgcacaggaacaggccactcgcctccagggggagctggcacgcatgcgc
caggagctccaagacaaatcgtctcaggaggagcagctccgacagcagctggcggataaa
gaagagagaaccaggaaggctttgatgttggccaaacagaaaatcaaacaggcaactgat
ggaaaggatcagttaaaacgtgagaacgacgaactgaaacagcagcatgatgagctaagg
cagcagcgtgaggaactggaggtacgggtgaatgctctccgatcccagtatgagggtcgg
ctgagccgccaggagaaggagctacgggacctacgagagcagcaggagcggcatggagag
cagagagatgagcctcaagagcagggaactagcaagactcaggaacagcagaggacaacc
gaacaaagacagatctctctaaaaaccacaccagccactgagaggggaggtgcaagtacc
tctgagcctcccacagccaatataaagcccactccactggtggcaacccccagcaagcaa
ccagccactgctgggaacaagcccactccgagagcaagtattaagccaatgatcacccct
gccccagtacccattccaactcctactgccacggtcatgcccaccacccagctggagacc
caggaaaccctgcagtcttccgatgctccaatgtatggcaatgcaagtggcttggtgcgc
tccaccagtccaaatgtgcagaccacacttgcccagtccatgctcagtgtccagcaaagc
cagaccactgccttcgtcacccctacacaacaacagagcctgccccctgctgaaccagcc
aatcaggagcctgctactgcagctgctgtgatgatggaggctgcacccagcacctcacag
atggaaagacctacgtctacagctgtgtttggaacagtgtctgccaccaccagcagcact
tcaagcaaacgcactcgagaggaggagctggagagtatgcctacagacacagaccctcag
gaggagcccaccgagccccccatatccaagaagctccgcattcagagagttggattagag
gaggatatgcttgctgaggacagcactgaagctgagagtgttgtgccaggagaaagtcaa
gaagcccctgatgccagtgaagagctggagctgaacttccccatcctggagaggagcagt
gaagaatttggagtgtctcaagaatttttcctgcctcaggagcctgaggcgtcgcactcg
cagagccaggacgagcctgatgagccagtcattgtcattgttagtgactcagaaagtgag
gaggagcaagaggaagagactgatgatgaggagcaggattaccaagaggaagaggaggag
gaggaagaagaagaggaggaggaggatgatgaggaggatgatggtggaattggagaggaa
gaggaggagagcaacgaggggagtggcagtggagatcctaatgaagcatatgaagaagat
acagagggtcctgacgccacagatccaggtactgagacagaggaaagtcttggcccgctg
gagtcgcaggcctttaacatggcagacggcctatctcagaccttctgcagtgaccaacca
atcagcagctctgttccacgccctcctccatcgccacggagaccacaacacacgtttcct
caagttaacatcctcgctccgcccacacaggagctaggtcctccagcgcaagcccagcgc
atccctgttcggcggcaggcagctgcaagagctcctcagctgtcttctggagcagccact
agtgcacaactgcagcagcacttctatgaggaggaagaccgcatggtccccagcaccccc
actctgattggacctcatcggtcagactgcttctcagaggccatcaattctccacaggta
gcaggtgtgccacgttttgggttgagccttccagacgatgtcccacagtcctctcactca
gagctaggccacctggcctctcaaggagggcttggtctgtatgacagccccctgttcctg
cctgttcatgaggaggagtcagggggacgcagtgtccccaccacacctctccaggtgtcc
gctcctgtgttcctggtttcctcctctctactatcaggaacttcgttttcggagacacta
ccctcagaagtaacagagctcgcctcccagtctgtacccatggtcagcacatccactcca
ggcctgaccgcttcagccggcccaagtgctgtggaggaaggagaggacctccttttggag
gcaggagaggatgggagcagtgctgaggctgctatggagcctgcatctcagaccgaggct
gaggagccggcccagccttcggacgaggctagccttccatccaccagccaagagccctct
tccagctctgcagacacaagcagcagtcaaccacccaaagccagaaccggatccggcaga
ctgtggacccgagcacggccctccagaagcttcgttaagagagatggattaggggctatg
ggagtgcgagggcgctttgccagataa
DBGET
integrated database retrieval system
