Astyanax mexicanus (Mexican tetra): 103043601
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Entry
103043601 CDS
T05042
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
103043601
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103043601
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103043601
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF2894
Motif
Other DBs
NCBI-GeneID:
103043601
NCBI-ProteinID:
XP_022539624
LinkDB
All DBs
Position
10:17034475..17301919
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AA seq
849 aa
AA seq
DB search
MPKQQQQGRDLELDRLVRQSPLSTRHTPSPSSPGSTLDLPNVPSYPRLPPISLSHQTLGH
SNPAFHIEDERTSARLSAGSRLSIHPAVNVEDMDSDSEQQATVSHEMPQIITPQDPNLKT
LTVPGASKPSRNRKKLYSSGDEDDEELESTVRAWPSQSSITSDDGLKERPTSSASQTSTV
VNERLQELVKLFKERTERAKEKLIDPDDSDNDTPPASPTKASTSAPTVTAPGPSSNTVKE
TEAEGEAQNTPAEKEPKEEKYSRVLCFKVNPQSRMSHLLQYRFPASIDPFTNLVYVLWLF
FVTLAWNWNLWMIPVRWAFPFQTRDNIHLWLMTDYLCDTIYIMDILLFQPRMQFIRGGDI
VSDSKETRKNYMRALRFKLDVASLLPLELFYFITGINPLLRCPRLLKIMSFFEFNMRLEA
ILTKAYVYRVIRTTTYLLYSLHCNACLYYWISANQGLGSTHWVYSGEGNAYIRCYYFAVK
TLITIGGLPDPTNLKEIIFQLVNYFVGVFAFSIMIGQMRDVVGAATADQTHYRSCMDSTV
KYMGSNRIPKDVQNRVKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYSIVSKVP
LFEGCDRQMIYDMLKRLKSVVYLPGDYVCKKDEVGREMYIIKSGEVQVVGGPGGKIVFAT
LKAGAVFGEISLLAVGGGNRRTANVIAHGFANLFILEKKGLNEILVHYPESQKVLRKKAK
KMLAEKKPVEKKEEEKEPVHVIPPRPETPKLFKAALEMTEKSGLRGTLAKLKEQTKKSSL
SLQPSICSSTLRTSPVPGHQSEQEPDPLSQSPFSPSGVDDESRPGQKCLIFEGAALTERN
MDGKDTTEE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcaacagcagcagggtagggaccttgagctggaccgcctggtccgccagtcc
cccctctccacccgccacaccccctctccttcctcccctggctccaccctggacctgccc
aatgtgccttcctacccccgcctgcctcctattagtctgtcccaccaaactttgggccat
tccaaccctgccttccacatcgaggacgagcgcacctctgctagactatcagctggttct
agactcagtattcacccagctgtaaatgtggaagacatggactcagacagtgagcagcaa
gcaacagtatcccatgaaatgccccagatcatcaccccgcaagaccccaacctcaaaacc
ctcacggtgcctggagcttctaaaccctcccgaaacagaaaaaagctgtattcttcagga
gatgaggatgatgaggagctggagtccacagtgagggcatggcccagccagagcagcatc
accagtgatgatggactaaaggaacgtccaacatcttcagccagtcagaccagtactgtt
gtgaatgagcgtctacaggagctggtcaagctttttaaagagaggacagagcgtgccaag
gagaaactcattgatcctgatgactcagacaacgacacaccacctgcctcaccaacaaag
gcatcaacatctgctccaacagtgacagctccaggtccttcttctaacactgtgaaagag
acagaggctgaaggggaagcacagaacactcctgctgagaaggagcctaaggaggagaag
tatagcagggtgctatgctttaaggtgaatcctcagtccaggatgagccatctgcttcag
tatcgctttccggctagcatcgatcccttcacaaacctggtctatgtgctctggctgttc
tttgtcacattggcctggaactggaacctgtggatgatcccagtgcgctgggctttcccc
tttcagacccgtgacaacattcacctgtggctgatgactgactacctgtgtgacacaatc
tatatcatggacatccttctcttccagccccgcatgcagtttatccgtggtggggatatt
gtgagtgactcaaaggaaacaagaaaaaattacatgagagctctgcgttttaagctggac
gtggccagtctcctgcccctagagctgttctacttcataactgggatcaaccccctcctc
cgctgtccacgattactaaagatcatgtctttctttgagttcaatatgcgtctagaggcc
attttgaccaaggcctatgtttacagagtcattcgcaccaccacctacttgctgtattcc
ctccactgcaatgcctgtctctattactggatttctgccaaccaaggcctgggctccaca
cattgggtatacagtggagaaggcaatgcttacatccggtgttactactttgctgtgaag
actctgatcactattggtgggctaccagatccaactaatcttaaagagattatttttcaa
ctcgtcaactactttgttggggtgtttgccttctccatcatgattggacagatgagagat
gtcgtaggtgcagccacggctgaccagactcactatcgctcctgcatggacagtacagta
aagtacatgggttccaaccgcatccctaaagatgtgcagaaccgagtaaaaacctggtac
aactatacttggcagtctcagggcatgttggatgaacaggaattgcttgtccagttacct
gacaagatgaggctggatattgcagtggatgtgaactactctattgtcagcaaagtccct
ctctttgagggttgtgatcggcagatgatttatgacatgctgaaaagactcaaatctgtt
gtgtatcttcctggagactacgtctgtaaaaaggatgaggttggtcgagagatgtatatc
atcaaatcaggtgaggttcaggtggttgggggtccgggtgggaagattgtctttgcaaca
ctaaaagcaggagcagtgtttggcgaaatcagtctgctggccgtgggaggggggaaccgg
agaacagccaatgtaatagcgcatggctttgctaatctcttcatcctggaaaagaagggc
ctcaacgaaatcttggtgcactacccggagtcccagaaagttcttcgcaagaaagccaaa
aaaatgctggcagaaaagaagcctgtggagaagaaggaggaagagaaggagccagtgcat
gtgatccccccgcggcctgagaccccgaaactgtttaaagcagctcttgaaatgacagag
aaatctggtctgcgaggcacattggccaagttaaaggagcagaccaagaaatccagtttg
tcactgcagccatccatttgctcctccacacttcgcacctcaccggtacctggtcaccaa
tcagagcaagagcctgacccactctcccagagtccctttagtccctccggcgtagacgat
gagagcaggccaggtcaaaagtgccttatttttgaaggtgcagcactaactgagaggaat
atggacgggaaggacacgacagaggagtaa
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