Astyanax mexicanus (Mexican tetra): 103044252
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Entry
103044252 CDS
T05042
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00310
Lysine degradation
amex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103044252 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103044252 (smyd1b)
Enzymes [BR:
amex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
103044252 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
103044252 (smyd1b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103044252 (smyd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
MYND_ZMYND11_ZMYD8
TPR_12
Motif
Other DBs
NCBI-GeneID:
103044252
NCBI-ProteinID:
XP_007254136
Ensembl:
ENSAMXG00000043896
UniProt:
A0A8T2LIB5
LinkDB
All DBs
Position
12:complement(35286798..35308280)
Genome browser
AA seq
486 aa
AA seq
DB search
MENVEVFDSPGKGRGLRAIKELWAGDVLFAEPCFSSVVFDSLAANVCHCCFRRQPKLQRC
GQCRFAQYCDRTCQRAAWEEHKQECAAIKSYGKVPNENIRLAARIMWRLDKEGGVISDMQ
LTTLEDLEDHISDMPEDDLKELKVDIHNFLDFWPRTSKQHTVERISHIMGVINCNGFMVS
DQKGLQAVGVGLFPNLCLVNHDCWPNCTVILNNGNHSAVNTLYHTQKRIELRALGKISEG
EELTVAYVDFLNLSEDRKRMLKQQYFFDCTCEHCTNKIKDDLKMAGAEVEGVKVPEDKVK
EVTEYSKEMLQNMEKARLDGNYNEVVKICRECVKKQENVLADTHIYQLRMWSTLSEVLSY
LQFFEEAADFAHKMVDGYMKLYHPNNAQLGMATMRAGVTHWQAGLIEVGHGMICKAYAIL
MVTHGPTHPIVKDLEAMRMQTEMELRMFKQNEYVYHSMREAALKNQPMKMMAEPVEEGIK
SLFRKK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtggaagtgttcgactcaccaggaaagggacgtggtctcagggcgatcaaa
gaactatgggctggagacgtgctgtttgcagaaccttgcttttcctctgtggtgtttgac
agtcttgcagcgaatgtctgtcactgctgtttccgccggcagccgaagctgcagcggtgt
ggtcagtgccgctttgcgcagtactgcgaccgcacatgtcagcgtgcggcctgggaggaa
cacaaacaggagtgtgccgccattaagagctatggcaaagtgcccaatgaaaacatccgc
ctcgctgctcgtattatgtggcgcctcgacaaagaaggaggtgtcatctcagacatgcag
ctcaccacactggaagacttggaggaccacatctctgatatgcctgaggatgacctgaag
gaactcaaagtggacatccacaacttcctggacttttggcccagaactagcaagcaacac
actgtggaaagaatctcacacatcatgggagtgatcaactgcaacggcttcatggtgagt
gatcagaagggtcttcaggcagttggagttggtctgttccccaacctttgtctggtcaac
catgactgctggcctaactgcactgtcatcctcaacaacggcaatcattcggctgtcaat
acattgtatcacactcagaagagaattgagctcagagctttgggtaaaatcagcgaggga
gaggagttgaccgtggcctacgtggacttcttgaacctgtcagaagaccgcaaacgcatg
ctgaagcagcagtacttcttcgactgtacctgtgaacactgcaccaacaaaatcaaagat
gacctgaagatggccggtgcagaggtggaaggtgttaaggtgccagaagataaagtaaag
gaagtaacagaatacagtaaggagatgctgcagaatatggagaaggcccgtttagatgga
aactacaatgaggtagtaaagatctgccgcgagtgtgtgaagaagcaggagaatgttcta
gctgacacacacatataccagctgaggatgtggagcacgctcagtgaagtcctctcctac
cttcagttcttcgaggaggcagctgactttgctcacaagatggtagatggatacatgaag
ctgtaccatccgaacaacgctcagctgggaatggctacaatgagggcaggagtgacacac
tggcaggccggactcatagaagtgggacacggcatgatctgcaaagcttatgctattctg
atggtcacccatgggccaacacatcctatcgttaaagaccttgaggcgatgcgcatgcag
acagagatggagctgcgcatgtttaagcagaacgagtatgtctatcactccatgcgggag
gcagcgctaaagaaccagcccatgaagatgatggcagaaccagtggaggagggcatcaag
agcctgttccgcaaaaagtga
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