Astyanax mexicanus (Mexican tetra): 103045092
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Entry
103045092 CDS
T05042
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103045092 (trpc4b)
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103045092 (trpc4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank_3
Ank
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
103045092
NCBI-ProteinID:
XP_022524504
Ensembl:
ENSAMXG00000008516
LinkDB
All DBs
Position
18:45445054..45470296
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AA seq
916 aa
AA seq
DB search
MSQLYYRRRDPSCYRDRIPLRVVRSEAELSCQEKAYLSAVERGDYGSVKRALDEAEIYFK
ININCVDPLGRTALLIAIENENLELIELLLSYNVHVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSVPQPHEVRCNCME
CVSSSDVDSLRHSRSRLNIYRALSSPSLIALSSEDPFLTAFQLSWELQELSKVENEFKTE
YEELSHQCKRFAKDLLDQTRSSRELELILNFRDDLSLLQDQESNNELARLKLAIKYRQKE
FVAQPNCQQLLASRWYDEFPGWRRRHWAGKFITCVFIGLLFPALSICYLVAPKSRYGLFI
RKPFIKFICHTASYLTFLFLLLLASQHIVSTKPNLQGPAPTTVEWMILPWVIGFIWTEIK
QMWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYVKYSGYKQRDKWEMWHPTLVAEA
VFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYDTKDDRVCKGIRCEHQNNAFSTLFETLQSLFWSIFGLIGLYVTNVQADHKFTEFVGAT
MFGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPTPFNI
IPSPKSIWYLITWIKIHVFRRKSKRTETFGVLGRRAAEKVRLNNQYQEVLRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGNRTCLPTPKLSTAASDSAHSDFLF
QYSTPPPQKSTASAQKISPEHVLKPPSSLLNGSVNSSNKDLARKDFPKDLSDFGLLQKSQ
PAARRPASTSSNTIYPLSEEESDRPAEEKQQKWTEGEVEKECEEREEKGEVEDPEGKIII
ISPKAAKTCSLSSTDT
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctgtactaccggcggcgggacccgtcctgctaccgggaccgtatccccctg
cgggtggtgcggtcggaggcggaactgtcctgtcaggagaaggcgtacctgagcgcggtg
gagcgcggggactacggcagcgtgaagcgagcgctggacgaggccgagatctacttcaag
atcaacatcaactgcgtggacccgctgggacgcaccgcgctgctcatcgccatcgagaac
gagaacctggagctgatcgagctgctgctcagctacaacgttcacgtgggcgacgcgctg
ctccacgccatacgcaaggaggttgtgggggccgtggagctgctgctcaaccataagaag
cccagcggagagaaacaggttcctcctatactgctggataagcagttctcagacttcact
ccggacatcacccccatcatcctcgccgctcacaccaacaactacgagatcatcaagctg
ctggtgcagaaaggcgtgtcagtgcctcagccccacgaggttcgctgtaactgcatggag
tgcgtgtccagctcggacgtggacagcctgcgccactcccgctcccgtctcaacatctac
cgagccctgtccagcccgtccctcattgccctgtccagcgaggaccccttcctcactgcc
ttccagctgagctgggagctgcaggagctcagcaaggtggagaacgagtttaagacggag
tacgaggagctctcgcaccagtgcaaacgattcgccaaagacctgctggatcaaacccga
tcctccagagagctggagctcatcctcaacttcagagacgacctcagcctcctgcaggac
caggagtccaacaacgagctggcccgcctcaaactcgccatcaagtaccggcagaaggag
ttcgttgctcagccaaactgtcagcagctgctggcctcgcgctggtacgatgagttcccg
ggttggcggaggcggcactgggccgggaagttcatcacctgcgtcttcatcggcctgctc
ttccccgccctctccatctgctacctggtggcgcccaaaagccgctacggcctcttcatc
cgcaagcccttcatcaagttcatctgccacacggcctcctacctgaccttcctcttcctc
ctgctgctggcctcccagcacatcgtctccaccaaacccaacctccagggcccggcaccc
accactgtggagtggatgatcctgccctgggttatagggttcatctggacggagatcaag
cagatgtgggacggtggatttcaggattatatccatgactggtggaacctcatggacttt
gttatgaactctctgtatttggccaccatttcactaaagatagttgcatatgtgaagtac
agcggctataaacagagggataagtgggagatgtggcatcccacgctggtggccgaggct
gtgttcgccatcgccaacatcttcagctccctgcggctgatctcgctcttcaccgccaac
tctcacctgggtcctctgcagatctcactcggccggatgctcctcgacatcctcaagttc
ctcttcatctactgcctggtgctgctggccttcgccaacggcctcaaccagctctacttc
tactacgacaccaaggacgacagagtctgcaagggcatccgctgtgaacaccagaacaac
gccttctctacgctgtttgagacgttgcagtctttgttctggtccatatttggtctgatc
ggtctgtacgtcaccaacgttcaagcggatcacaagttcaccgagtttgttggagccacc
atgttcggcacgtataacgtcatctcgctggtggttctcctcaacatgctcatcgccatg
atgaacaactcctatcagcacattgctgatcacgctgatatcgagtggaagtttgccagg
actaaactgtggatgagttattttgaagaaggaggaacactgccaacacctttcaacatc
atccccagtcccaagtctatatggtacctcattacctggattaagattcacgttttcagg
agaaagtcaaagaggacggagacttttggagtcctggggagaagagctgctgaaaaagtc
aggctaaataaccagtaccaggaagtgctgaggaacctggtgaaacgatacgtagcagct
atgattcgagacgccaagacagaggaggggctaacagaggagaacttcaaggagctgaag
caggacatctccagcttccggtacgaggttctggggatgatgaaggggaaccgaacctgt
ttgcccacacctaaactgagtacagcagcttcagactccgcccactcagactttctgttc
cagtactccacacctcctcctcagaagagcacggcgagcgctcagaagatcagtcctgag
cacgtcctgaagcccccgagcagccttctcaacggctctgtgaactcctccaacaaagat
ctggccagaaaagacttccccaaagatttatcagacttcggcctcctgcagaaatctcaa
ccagcagccagacgtcctgcttcaacctccagcaacaccatctacccgctctcagaggag
gagtccgacagacctgcagaggagaagcagcagaaatggactgagggagaggtagagaag
gagtgtgaagaaagagaagagaaaggagaggtggaggatccagaaggaaagatcatcatt
atctctccaaaagcagcaaagacctgcagtctgtcatcaacagacacgtaa
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