Astyanax mexicanus (Mexican tetra): 103045898
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Entry
103045898 CDS
T05042
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103045898 (smc4)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
103045898 (smc4)
Condensin II
103045898 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
103045898
NCBI-ProteinID:
XP_007258458
Ensembl:
ENSAMXG00000013950
UniProt:
A0A8B9LGY0
LinkDB
All DBs
Position
4:complement(42034453..42061548)
Genome browser
AA seq
1297 aa
AA seq
DB search
MPGKTTKSSTAAKRGKGSQDDSDEEIHQAPTKEARSGDQDLPPAPNTNDAAPGEPAEAVV
DNRSLEEILGSIPPPPPPAMTNEPGAPRLMITHIVNRNFKSYAGEQILGPFHKRFSCIIG
PNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDEHKDIQSCTVEVHFQKIVDKEGD
DYDVIPNSKFHVSRTAGKDNSSAYHINGKKATFKDVGTVLRSHGIDLDHNRFLILQGEVE
QIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPINTLCRRVELLNEQRGEKLNRVKMVEK
DKNALEGEKNKAVEFLTLENDMFKKRSQLCQFYVHDLQQRVAEKEAEKQQIQEDTKGLTE
KSNQLTEEMKGKNEALKNVEKKLGKLTKFIENQKEKFTQLDLQDVEVREKLKHTKTKTKK
LHKQLQKDKEKLEEVRNVPASSEKIITEASAQKEELEKQKVKEEESLAQVMESLKEETSG
LQNEKEQKEKELLELSKAVNETRSQMDVAQSELDIYLSQHNTAVSQLNQAKETLQGTADT
LRERRSAIKDLQVKIPKCEQELKKDEQELEQISGQDGEARGVVSDLRQKVEEAKSSLSSN
RSRGKVLDALMQQKQSGKIPGILGRLGDLGAIDERYDVAISSSCGSLDNILVDTIDTAQK
CVVFLKSQNIGVATFIGLDKMKVWEKNMVAISTPENIPRLFDMVKVKDESVRPAFYFALR
DTLVAKDLEQATRVAFQKDKRWRVVTLQGQIIEQSGTMTGGGGRVMKGRMGSSIGTEVTQ
EQLDRMESALNEKVVQLQGWQQRKQQLEEKVHKQRRELRDMKNTLEKYTASIQSLEEQEM
LMKSQMKGLEANVLAAAPDKAKQKQMEKSLDAFKKNFEAASNKAGKVEAEVKRLHTLIVD
INSHKLKAQQDKLDKVNKELDECSSAITKAQVAIKTAGRNLKKSEEIVERLETETKENEK
LMEELMEQLKKLEEQAGEIMKTCQDAEEALPEVQEEHRGVLQEIKAVQEKEHALQKESLN
IRLKVEQIDTAISECQSKSKHWDKEATKIVLHSIDDKPAEELPKLTPEDLAAIKNPDVIK
NEIALLEDRCARMKPNLGAIAEFKKKEELYLQRVAELDEITTQRDDFKRGCEDLRKQRLN
EFMAGFNIITNKLKENYQMLTLGGDAELELVDCLDPFSEGIMFSVRPPKKSWKKIYNLSG
GEKTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRN
NMFEMADRLIGIYKTHNTTKNVGINPKTIVLKDVEVA
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgccaggaaaaacgaccaagtcctccactgctgctaaacgaggaaaagggtctcaggat
gactctgacgaggagatacaccaagcccccactaaagaagctcgctcgggtgaccaagac
ctgccaccagcacccaacactaatgatgcagctcccggggagcctgccgaggcagtggtg
gataatcgaagtttggaggagatcctcggtagcatccctccacccccgcccccagcgatg
accaatgaaccgggcgctcctcgtctgatgatcactcacatcgtcaatcgcaattttaaa
tcatacgctggggagcagattctgggacctttccacaagcggttttcctgtattattggt
ccaaacggcagtggaaagtccaatgtgatcgactccatgctctttgtgtttggatacaga
gctcaaaaaatccgatccaaaaagctgtctgtccttattcacagttctgatgagcacaag
gacatccagagctgcactgtagaggtgcacttccagaagattgttgataaggaaggagat
gactacgatgtcatccccaacagcaagttccatgtttcaagaacagccggtaaagataat
tcctcagcctaccacatcaatggcaaaaaggccacttttaaagatgttgggacagtgctt
cgtagccatggcattgaccttgaccacaacagatttcttattctacagggggaagtggag
cagattgctatgatgaagcctaaaggccagacagagcatgacgaaggtatgctggaatac
cttgaggacattattggctcctgccgactcaaagagcctatcaacactttgtgcagacga
gtggagctactcaatgaacagagaggagaaaagctgaatcgtgtgaagatggtggagaag
gataaaaatgccctggagggtgagaagaacaaagcggtagagtttctcactttggaaaat
gacatgttcaagaagaggagccaactctgccagttctatgtgcatgatttgcagcagcgt
gtggctgaaaaggaagcagagaaacagcagatccaggaggacaccaagggactgactgaa
aaaagcaaccagctcacagaggaaatgaaggggaagaacgaggccctgaagaatgtggag
aagaaattgggcaagctgactaagttcattgagaaccagaaggagaaattcacccagctg
gacctccaggatgtagaggtgcgcgagaagctcaaacacaccaagaccaaaaccaagaaa
cttcacaaacagctgcagaaggacaaggagaagttggaagaggtgagaaatgtccctgcc
agcagtgagaagatcattacagaagcctctgcccaaaaggaagagttggagaagcagaaa
gtgaaggaagaggagtccctggcccaagtgatggagagtcttaaggaggagaccagcggc
ctgcagaatgagaaagagcaaaaagagaaggagctcctggagctgagtaaggcagtgaat
gagacacgctcacagatggatgtagctcagtcagagttggacatctaccttagccaacac
aacacagcagtttcacagctcaaccaagcgaaagagaccttgcagggcactgctgacaca
cttcgtgagagaagatctgccatcaaagacttgcaggtcaaaataccaaagtgtgagcag
gagcttaagaaggatgaacaggagctggaacagatctctgggcaggatggggaggccagg
ggagtggtaagtgacctgaggcagaaggttgaagaggcaaaaagctctttgtcctccaac
cgcagcagaggaaaagtgctggatgccctcatgcagcaaaaacagagtggcaagatccct
ggcatccttggacgcctgggtgacttgggggccattgatgagaggtatgatgttgccatt
tcttcaagctgtggctcgcttgataacatcttggtggacaccatcgacacagcccagaaa
tgcgttgttttcctcaagtctcagaatatcggagtggccacttttattggtctagataag
atgaaggtttgggaaaaaaatatggttgccatttccacacctgagaacattccccggttg
tttgacatggtgaaggtgaaggatgaatccgtccgacctgcgttctactttgccctgaga
gacacgcttgttgctaaagatctggagcaagccactagagtggccttccagaaagataaa
cgctggagagtggttactttgcagggacagatcatcgaacagtctggcaccatgactgga
ggaggaggacgtgtaatgaaaggcagaatgggctcctctattggcaccgaagtaacacag
gaacagctggaccgtatggagagtgcactgaatgagaaggtggtgcagctgcagggctgg
cagcagaggaaacagcagctcgaggagaaggtgcacaaacaaagacgggagctcagagac
atgaagaacacattggagaaatacacagccagcattcagagtcttgaagagcaagagatg
ctcatgaagtctcagatgaaagggttggaagcaaatgttctcgctgctgccccagacaag
gctaagcaaaaacaaatggagaagagcctggatgccttcaagaaaaactttgaggctgcc
tccaacaaggcaggaaaggtcgaggctgaggtaaagcgacttcacaccctgattgtggat
ataaacagccacaaactgaaggcccagcaggacaaactagataaggtcaacaaagaactg
gacgaatgttcctcagctattactaaagcccaagtggctatcaagaccgcaggaagaaac
ctaaagaagtctgaggaaatagttgaacgtctagaaacagagactaaagagaatgagaag
ctcatggaggagctaatggagcagttaaagaaactggaggaacaagcaggagagatcatg
aagacttgccaagatgctgaggaggcactgcctgaagtgcaggaagagcatcgtggagtg
ctacaagagattaaggctgttcaggaaaaagagcatgctctgcagaaagaatccttgaac
atccggctgaaagttgagcagatcgacacagctatttctgagtgccagagtaagagcaag
cactgggataaagaggccacaaagatcgttctgcattctattgatgataaaccagcagag
gaactgcctaagctgaccccagaggatttggcggccattaagaacccagatgttattaaa
aatgagattgctctgctggaagaccgctgtgcccggatgaagcccaacttgggagctata
gcagagtttaaaaagaaggaggagctgtatttgcagagagtagctgaactggatgagatc
accacccagagagatgatttcaagcgagggtgtgaagatttgcggaagcagagactgaac
gagttcatggctggcttcaacattatcaccaacaagctgaaagagaactaccagatgttg
acactagggggtgatgcagagctggagctggtggactgcctggacccgttttctgagggc
atcatgtttagtgtgcgtcctcctaaaaagagctggaagaagatctataacttgtctgga
ggagagaaaactctgagctctctggctttggtttttgctctgcatcactttaagcccaca
cctctttacttcatggacgagatagatgctgcgctggacttcaagaacgtgtccattgtg
gcctgctacatttatgagcaaaccaagaatgctcaattcatcattatttctctgaggaac
aatatgttcgagatggctgaccgtctgatcggcatctacaagacacacaacaccaccaag
aatgttggcatcaaccccaaaaccattgtcctcaaagatgttgaagttgcatga
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