Astyanax mexicanus (Mexican tetra): 103047619
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Entry
103047619 CDS
T05042
Symbol
gabrr1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04080
Neuroactive ligand-receptor interaction
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103047619 (gabrr1)
04082 Neuroactive ligand signaling
103047619 (gabrr1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103047619 (gabrr1)
Ion channels [BR:
amex04040
]
Ligand-gated channels
GABA-A
103047619 (gabrr1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Sigma_reg_N
Motif
Other DBs
NCBI-GeneID:
103047619
NCBI-ProteinID:
XP_007255271
Ensembl:
ENSAMXG00000041337
UniProt:
A0A3B1II35
A0A8B9L287
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All DBs
Position
1:49723224..49785687
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AA seq
478 aa
AA seq
DB search
MHADVLALLLVWLLCACGASSRSRGRTLQTYGQIRSRRETTRTEGGVGGRSKPGSPILKR
SPDITKNPVTKSEQLLRIDDHDFTMRPGFGGPAIPVGVDVQVESLDTISEVDMDFTMTLY
LRHYWKDERLSFPSTTNQSMTFDSRLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPD
GKVLYSVRVTVTAMCNMDLSHFPLDTQTCSLEIESYAYTDDDLMLYWKKGNDSLKTDDRI
SLSQFLIQEFHTTTKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSF
WIDRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYA
AVNYLSTLQERKERKLRERLPCTCGMSHPGQIMMSSSYSEMDAMTTGHYGMPEMNGDKRE
RILVQLAMDKEQSSHSQSGNTRSYNSMWIDTHAIDKYSRVIFPGAYTLFNIIYWSIYS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcggacgtgcttgccctgctcctcgtgtggctcctgtgcgcttgcggagcctcg
tctcggtcgaggggacggacgctgcagacctacggccagatcaggtcccgaagagaaact
acaagaacagagggaggagttggagggaggagcaagcctggaagccccattctgaagagg
agccctgatatcacaaagaatccagtgaccaaatcagaacagctgctcaggatagatgat
cacgacttcaccatgaggcctggctttggaggtccagctattcctgtgggtgtggatgtc
caagtcgagagcttggacactatatcagaagtggacatggacttcaccatgaccctgtat
ctgaggcactactggaaggatgagcggctgtccttccccagcaccaccaaccagagcatg
accttcgacagccgtctggtgaagaagatctgggtcccggacatgttcttcgtccactcc
aagcgctcctttatccacgacaccacgactgacaatgttatgctcagggtttatcctgat
ggaaaagttctctacagtgtgagggtcactgttacagctatgtgcaacatggaccttagc
cactttcctcttgatactcagacatgttcactggagattgaaagctacgcctacactgat
gatgacctgatgctgtactggaagaaagggaatgactctctgaaaactgacgacaggatc
tcactctcccagttcctcattcaggagttccacaccaccacaaagctggccttctacagc
agcacgggctggtataaccgtctgtacatcaacttcactctacggcgtcacatcttcttc
ttcctgctgcagacctacttccctgccactctgatggtcatgctgtcctgggtgtccttc
tggattgaccgccgcgccgttcctgccagggtgcctctgggcatcaccacggtgctcacc
atgtccaccatcatcacaggagtgaacgcctccatgccgcgggtgtcctacatcaaagcc
gtggacatttacctgtgggtcagctttgtcttcgtcttcctctctgttatagagtacgca
gctgtcaactacctgtcaaccctgcaggagcgtaaggagaggaagctcagagagaggctg
ccatgcacgtgtgggatgtctcacccgggccagatcatgatgagcagcagctacagcgag
atggatgccatgaccacgggtcactacggcatgccggagatgaatggggacaagcgcgag
cgaatcctggtgcagctggccatggacaaagagcagagcagtcacagccagagcggaaac
acacgctcctacaacagcatgtggatcgacacccacgccatagacaaatactcacgggtg
atcttccctggagcctacacgctcttcaacatcatatactggtccatctactcctaa
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