Alteromonas macleodii English Channel 673: AMEC673_00080
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Entry
AMEC673_00080 CDS
T02254
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amg
Alteromonas macleodii English Channel 673
Pathway
amg03030
DNA replication
amg03410
Base excision repair
amg03420
Nucleotide excision repair
amg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMEC673_00080
03410 Base excision repair
AMEC673_00080
03420 Nucleotide excision repair
AMEC673_00080
03440 Homologous recombination
AMEC673_00080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amg03032
]
AMEC673_00080
03400 DNA repair and recombination proteins [BR:
amg03400
]
AMEC673_00080
Enzymes [BR:
amg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMEC673_00080
DNA replication proteins [BR:
amg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AMEC673_00080
DNA repair and recombination proteins [BR:
amg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AMEC673_00080
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMEC673_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFT72722
LinkDB
All DBs
Position
complement(17078..19870)
Genome browser
AA seq
930 aa
AA seq
DB search
MPDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIKQYNPTHMAV
IFDAKGKTFRDDIYKEYKANRPPMPDELRSQIEPLHAIIKAMGLPVIVESGVEADDVIGT
LAKHATEKGIDTLISTGDKDMAQLVNEHVTLINTMTNQLMDVEGVNTKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDDIYKNLDKIADLSFRGSKSMAAKMQEYE
EQARLSYTLATISIDLDLDYDVEALMPCQADNEQLRDLFAEYEFKRWHAEVSALIAGGDT
SGANANTNEEKSDSAEESEQSESIEIDKSKYETVLDEERFNAWVAKLEKAELIAFDTETT
SLNYMDAELVGVSFCIEEGEAAYVPVAHDYPDAPAQLSREFVLDALKPILESDTVIKVGQ
HIKYDKNVLANYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFEEIAGK
GAKQLTFNQISLEEAGPYAAEDADITLRLHNAIWTKLKEIPELKNLLIDVEVPLACVLSR
MEQEGVLIDSQRLLQQSQDLATRIAELESEVHEEAGEPFNLGSTKQLQHVLFEKMSLPII
KKTPKGAPSTSEDVLQELALEYPLPKKIMEYRGLTKLKNTYTDKLPKMINHRTGRVHTSY
HQAVTATGRLSSTDPNLQNIPIRNEEGRRVRQAFVPREGNKFVAADYSQIELRIMAHLSG
DKGLLDAFAHGKDIHKATASEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLSKQLNI
PRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKGA
ERAAINAPMQGTAADIIKMAMIKVDDWIRKNASDDVTMMMQVHDELVFEIKEDKVETYVS
TITALMESAATLNVPLVVEAGVGENWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattctaaaaagcctccatttattcttgtcgatggatcgtcatatctttttcgt
gcctttcacggtttaccacctttaaccaactcaaagggccaagacaccggtgctatttat
ggtgttgtgaacatgcttaaaagcttgatcaaacaatacaacccgacgcatatggcggtg
atttttgatgctaaaggcaagacctttcgcgatgacatctataaagagtacaaagcaaac
cgtcctccgatgccggatgagctaagaagccaaatcgaaccgttgcacgccatcattaag
gcaatgggattacctgttattgttgaatcgggtgtagaagctgatgacgtgattggcacg
ttagccaaacacgccacagaaaaaggtattgatacccttatcagcaccggcgataaagac
atggcgcagctggtaaatgaacatgtcaccttaatcaacaccatgacaaaccaactgatg
gatgtcgaaggtgtaaatacgaagtttggtattccaccggagcttgtgatcgacttcctt
gcgcttaagggcgataaagtcgataacatcccaggtgtacctggtgtaggtgataaaagt
gcacaagccttgttaaacggtattggcggtatcgacgacatatataagaacctggataaa
attgcagatctgtcgtttagaggcagtaagtcgatggcggctaaaatgcaggaatacgaa
gagcaagctcggctttcttataccctagctactatcagcatcgatcttgaccttgactat
gatgtcgaagctcttatgccttgccaagccgataacgaacaacttcgcgatctgtttgcc
gaatacgagttcaaacgctggcatgcagaagtaagcgcgctaatagccggcggagatacc
tctggtgccaatgcaaacaccaacgaagaaaaaagcgatagcgcagaagagagcgaacaa
agtgaatcgatagagatcgataaatcaaagtatgagacagtgcttgatgaggaacgcttt
aatgcgtgggtcgcgaagctagaaaaagcagagctaatcgcttttgataccgagacaacc
agtcttaactacatggatgcggagttagttggtgtttcattttgtatagaggaaggtgaa
gcagcttatgtgcctgttgctcacgattacccagatgcacccgcccagctatcacgagaa
ttcgtattagacgcattaaaacctattttagaatcggacaccgtgatcaaagtaggtcaa
cacataaaatacgacaaaaacgtattagcgaactatgacattaccttaaacggcattggc
tttgacaccatgcttgagagctatgtactaaacagtactgcacagcgccatgatatggac
tcacttgccctagcctaccttggtcataaaactattcacttcgaagagattgcgggtaaa
ggcgcaaagcagctaacgtttaatcaaattagccttgaagaagctgggccttatgccgca
gaagatgctgatatcacgcttcgcttacacaacgctatttggactaagttgaaagaaatt
cctgagcttaaaaatctattgatagatgttgaggttcccctagcctgtgtactttctcgt
atggaacaggaaggtgtattgatagacagccaaaggctgcttcagcaaagccaggatctt
gccacccggattgccgagcttgaaagtgaagtacatgaggaagctggcgagccattcaac
ttaggttctactaaacagcttcaacatgtcttgttcgaaaaaatgtcgctaccgatcata
aagaaaacgcctaaaggggcgccgtctacttctgaggacgtactgcaagaacttgcgctt
gagtacccgttgccgaagaagatcatggaataccgtggcctaaccaagctaaagaatacc
tacacggataaacttcctaagatgatcaatcatcgtacgggtcgagtgcatacttcttat
caccaagcagtaaccgccacgggacgactctcttccaccgatcctaacttacagaacatc
cctatccgaaatgaggaaggtcgccgcgtacgtcaggcatttgtaccaagagaaggaaat
aagttcgtcgctgccgactactcgcaaattgaattgcgaataatggctcacctttcgggt
gataagggtctattagacgcctttgcacatggcaaagatattcataaagctacagcgtct
gaagtgtttggtgttccactagatgaagtaaccactgaacagcgtcgcagtgcaaaagcg
attaactttggcttaatttacggtatgagtgcctttgggttgtcgaagcaacttaatatt
ccacgtaatgaagcacagaaatatatggatctttacttcgagcgctacccaggcgtgctt
gagtacatggattcaacacgtgagagcgcgaaagaaaaaggttatgtagaaaccgtattt
ggtcgcagactttatttgcctgatattaaagccagtaatggtgcacgtagaaaaggcgca
gagcgcgcagcgataaacgcgcctatgcaaggcacagcggcagacattattaagatggcg
atgatcaaagttgatgactggattagaaaaaatgcatctgatgatgtgacaatgatgatg
caggtgcacgatgaattggtttttgaaataaaagaagacaaagtggaaacctatgtctct
actattactgctcttatggaaagcgcagctacgctaaatgttccgctggttgttgaggct
ggtgtgggcgaaaactgggatgaagcgcactag
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