Actinosynnema mirum: Amir_3653
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Entry
Amir_3653 CDS
T00957
Name
(GenBank) Endonuclease/exonuclease/phosphatase
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ami
Actinosynnema mirum
Pathway
ami03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Amir_3653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_3653
Enzymes [BR:
ami01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Amir_3653
DNA repair and recombination proteins [BR:
ami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Amir_3653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
DUF6301
Motif
Other DBs
NCBI-ProteinID:
ACU37538
UniProt:
C6WBX1
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All DBs
Position
complement(4266640..4267470)
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AA seq
276 aa
AA seq
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MTEQDQLRVLTWNVQRASAARTRAQVEWLVRQEADVLVLTEVSAGESGGLLARWLRERGY
QVLLPDPAPEDRYRVLLACPADVGLEEADSGVPMPHRCVAAKVKSSAMEVGVVGLYVPSR
GPRERRNVAKRAFQEEVSAALPGLTARLGAAGPVVVAGDQNVVEPGHIPAHPVFGAWEYD
FYRSFAEAGFTDAFRLRHPEAVEHSWFGRDTGAGKRNGYRFDHVFLTTTHAALARDCRYL
HTPREDGLSDHSAMEVVLDQTVSGIGTQLNSGQKRA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagcaggaccagttgcgggtgttgacctggaacgttcagcgcgccagcgccgcc
cgcacccgtgcccaggtcgagtggctggtgcggcaggaggctgatgtgctggtgctcacc
gaggtctccgccggtgagtccggcgggttgctggcgcggtggctgcgcgagcgcggctac
caggtgctgctgcctgatccggctccggaggaccggtaccgggtgctgctggcctgcccc
gccgacgtgggcttggaggaggccgactccggggtcccgatgccacaccggtgcgtggcc
gccaaggtgaagtcgtccgcgatggaggtgggcgtggtgggcctgtacgtgccctcacgg
gggccccgtgagcggcgcaacgtggccaagcgcgcctttcaggaggaggtgtccgccgcg
ctgcccggactgaccgcgcgtctcggcgctgccgggcccgtggtggtggcgggggaccag
aacgtggtcgaacccggccacatccccgcccacccggtgttcggggcctgggagtacgac
ttctaccgctccttcgccgaagccgggttcaccgacgccttccggctgcgtcaccccgag
gccgtcgagcactcctggttcggtcgcgataccggggctgggaaacgcaacggctaccgc
ttcgaccacgtcttcctcaccaccacccacgccgccctcgcccgggactgcaggtacctg
cacaccccgcgcgaggacgggctcagcgaccactcggcgatggaagtggtgctggatcag
accgtctccgggatcggcacccagttgaactccgggcagaagcgggcgtag
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