KEGG   Actinosynnema mirum: Amir_5234
Entry
Amir_5234         CDS       T00957                                 
Name
(GenBank) Primosomal protein N' (replication factor Y) - superfamily II helicase-like protein
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
ami  Actinosynnema mirum
Pathway
ami03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ami00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Amir_5234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ami03400]
    Amir_5234
Enzymes [BR:ami01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Amir_5234
DNA repair and recombination proteins [BR:ami03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Amir_5234
SSDB
Motif
Pfam: PriA_3primeBD NIR_SIR DZR
Other DBs
NCBI-ProteinID: ACU39055
UniProt: C6W8Y3
LinkDB
Position
complement(6229267..6231264)
AA seq 665 aa
MAQGRAASRRGERVPAAAMPVARVVVDVPLPHLDRPFDYQVPTDLDEVAVPGVRVRVRFA
GQLVDGYLLERAESTEYGRGLAFLEKVVSPEPVLAPEVVELARAVADRYAGTLIDVLRMA
VPPRHARAEAAEPPPPSPPPERPADTGWGRYRHGANFLDALAAGRAPRAVWQALPAEDWP
ARLAEVAATVASTGKGVLVVVPDHRDLARLHEACARLVDPAAVTVLAAELGPQERYKRWL
AVRRGSVRIALGARGAALAPVNDLGLVVVWDDGDDLHAEPRMPYPNVRDVLVQRSHLGGA
AFLVGGFARTAEAQLLVDSGWAHEVVADRDELRAAAPRVVAVGDGDWQEAKDPAARSARL
PSIAFEAARAALSAGAPVLIQVPRRGYVPALACGQCRAAARCRRCAGPLALPGGGGDGAP
RPAYCRWCGATEAAFRCPSCGSRRLRGQVIGARRTAEELGRAFSGVVVRTSGGDDVLAKV
PGGPALVVATPGAEPVADGGYGAALLLDGWALLGRADLRAAEEAVRRWMGAAALVRRGDR
GGRIVVVAESSLAPVQALVRWDPVWHAGQELAARAELGFPPAVRMATLDASPDALAVLLE
ELRLPERGEVLGPVPLGEERERALVRVPRGDGRALSASLSDVLSVRSARKETEPVRVKVD
PLEVL
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggcacagggcagggcggcgagcaggcggggcgaacgcgtccccgccgccgccatgccc
gtggccagggtcgtcgtggacgtgccgctgccgcacctggaccggccgttcgactaccag
gtgcccaccgacctggacgaggtcgccgtgcccggcgtccgggtgcgggtccgcttcgca
ggccagctggtcgacggctacctgctggagcgcgccgagtccaccgagtacggccggggg
ctcgccttcctggagaaggtggtgtccccggagcccgtgctggccccggaggtggtcgaa
ctggcccgcgcggtcgccgaccggtacgcgggcaccctgatcgacgtgctgcgcatggcc
gtcccgccccggcacgcccgcgccgaggccgccgagcccccacccccctcgcccccgccc
gagcggcccgccgacaccggctggggccgctaccggcacggggccaacttcctggacgcg
ctggccgccggtcgcgcgccgcgcgccgtgtggcaggcgctgcccgccgaggactggccg
gcccggctcgccgaggtcgccgcgaccgtggcgtccaccggcaagggcgtgctggtcgtg
gtgcccgaccaccgggacctcgcccggctgcacgaggcgtgcgccaggctggtcgacccg
gcggcggtgaccgtgctggccgccgagctggggccgcaggagcggtacaagcgctggctg
gcggtgcggcgcggctcggtgcggatcgcgctgggcgcgcgcggcgcggcgctggccccc
gtcaacgacctcgggctcgtcgtggtgtgggacgacggcgacgacctgcacgccgagccg
aggatgccttacccgaacgtgcgcgacgtgctcgtgcagcgctcccacctgggcggggcc
gcgttcctggtgggcgggttcgcccgcaccgccgaggctcagctgctggtggacagcggg
tgggcgcacgaggtcgtggccgaccgggacgagctgcgggccgccgcgccgcgcgtggtc
gcggtcggcgacggcgactggcaggaggccaaggacccggcggcccgctcggcgcggctg
ccgtccatcgcgttcgaggccgcccgcgccgcgctgtcggcgggcgcgccggtgctgatc
caggtgccgcgccgggggtacgtgcccgcgctggcctgcgggcagtgccgcgcggcggcc
cggtgcaggcgctgcgccggtccgctcgcgctgccaggcggtggcggcgacggcgcgccg
aggcccgcctactgccggtggtgcggggcgaccgaggcggcgttccgctgcccgtcgtgc
gggtcgcgcaggctgcgcgggcaggtcatcggggccaggcgcaccgccgaggagctgggg
cgggcgttcagcggggtcgtggtgcgcacctccggcggcgacgacgtgctggcgaaggtg
cccggcgggcccgcgctggtggtggccacgcccggcgcggaaccggtcgccgacggcggg
tacggggcggcgctgctgctcgacggctgggcgctgctcggccgggccgacctgcgggcc
gccgaggaggcggtgcgccgctggatgggggccgccgccctggtgcgccggggcgaccgg
ggcggccggatcgtggtggtcgccgagtcctcgctggcccccgtgcaggcgctggtgcgc
tgggacccggtgtggcacgccgggcaggagctggccgcccgcgccgagctgggcttcccg
cccgccgtgcggatggccacgctcgacgcgtccccggacgcgctggccgtcctgctggag
gagctgcggctgcccgagcgcggcgaggtgctgggcccggtgccgctgggcgaggagcgc
gagcgggcgctggtgcgggtgcccaggggcgacgggcgggcgctgtcggcgtccctgtcg
gacgtgctgtcggtccgcagcgcccgcaaggagaccgaacccgtgcgggtgaaggtcgac
ccgctcgaagtgctctga

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