Actinosynnema mirum: Amir_5234
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Entry
Amir_5234 CDS
T00957
Name
(GenBank) Primosomal protein N' (replication factor Y) - superfamily II helicase-like protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ami
Actinosynnema mirum
Pathway
ami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Amir_5234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_5234
Enzymes [BR:
ami01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Amir_5234
DNA repair and recombination proteins [BR:
ami03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Amir_5234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
NIR_SIR
DZR
Motif
Other DBs
NCBI-ProteinID:
ACU39055
UniProt:
C6W8Y3
LinkDB
All DBs
Position
complement(6229267..6231264)
Genome browser
AA seq
665 aa
AA seq
DB search
MAQGRAASRRGERVPAAAMPVARVVVDVPLPHLDRPFDYQVPTDLDEVAVPGVRVRVRFA
GQLVDGYLLERAESTEYGRGLAFLEKVVSPEPVLAPEVVELARAVADRYAGTLIDVLRMA
VPPRHARAEAAEPPPPSPPPERPADTGWGRYRHGANFLDALAAGRAPRAVWQALPAEDWP
ARLAEVAATVASTGKGVLVVVPDHRDLARLHEACARLVDPAAVTVLAAELGPQERYKRWL
AVRRGSVRIALGARGAALAPVNDLGLVVVWDDGDDLHAEPRMPYPNVRDVLVQRSHLGGA
AFLVGGFARTAEAQLLVDSGWAHEVVADRDELRAAAPRVVAVGDGDWQEAKDPAARSARL
PSIAFEAARAALSAGAPVLIQVPRRGYVPALACGQCRAAARCRRCAGPLALPGGGGDGAP
RPAYCRWCGATEAAFRCPSCGSRRLRGQVIGARRTAEELGRAFSGVVVRTSGGDDVLAKV
PGGPALVVATPGAEPVADGGYGAALLLDGWALLGRADLRAAEEAVRRWMGAAALVRRGDR
GGRIVVVAESSLAPVQALVRWDPVWHAGQELAARAELGFPPAVRMATLDASPDALAVLLE
ELRLPERGEVLGPVPLGEERERALVRVPRGDGRALSASLSDVLSVRSARKETEPVRVKVD
PLEVL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcacagggcagggcggcgagcaggcggggcgaacgcgtccccgccgccgccatgccc
gtggccagggtcgtcgtggacgtgccgctgccgcacctggaccggccgttcgactaccag
gtgcccaccgacctggacgaggtcgccgtgcccggcgtccgggtgcgggtccgcttcgca
ggccagctggtcgacggctacctgctggagcgcgccgagtccaccgagtacggccggggg
ctcgccttcctggagaaggtggtgtccccggagcccgtgctggccccggaggtggtcgaa
ctggcccgcgcggtcgccgaccggtacgcgggcaccctgatcgacgtgctgcgcatggcc
gtcccgccccggcacgcccgcgccgaggccgccgagcccccacccccctcgcccccgccc
gagcggcccgccgacaccggctggggccgctaccggcacggggccaacttcctggacgcg
ctggccgccggtcgcgcgccgcgcgccgtgtggcaggcgctgcccgccgaggactggccg
gcccggctcgccgaggtcgccgcgaccgtggcgtccaccggcaagggcgtgctggtcgtg
gtgcccgaccaccgggacctcgcccggctgcacgaggcgtgcgccaggctggtcgacccg
gcggcggtgaccgtgctggccgccgagctggggccgcaggagcggtacaagcgctggctg
gcggtgcggcgcggctcggtgcggatcgcgctgggcgcgcgcggcgcggcgctggccccc
gtcaacgacctcgggctcgtcgtggtgtgggacgacggcgacgacctgcacgccgagccg
aggatgccttacccgaacgtgcgcgacgtgctcgtgcagcgctcccacctgggcggggcc
gcgttcctggtgggcgggttcgcccgcaccgccgaggctcagctgctggtggacagcggg
tgggcgcacgaggtcgtggccgaccgggacgagctgcgggccgccgcgccgcgcgtggtc
gcggtcggcgacggcgactggcaggaggccaaggacccggcggcccgctcggcgcggctg
ccgtccatcgcgttcgaggccgcccgcgccgcgctgtcggcgggcgcgccggtgctgatc
caggtgccgcgccgggggtacgtgcccgcgctggcctgcgggcagtgccgcgcggcggcc
cggtgcaggcgctgcgccggtccgctcgcgctgccaggcggtggcggcgacggcgcgccg
aggcccgcctactgccggtggtgcggggcgaccgaggcggcgttccgctgcccgtcgtgc
gggtcgcgcaggctgcgcgggcaggtcatcggggccaggcgcaccgccgaggagctgggg
cgggcgttcagcggggtcgtggtgcgcacctccggcggcgacgacgtgctggcgaaggtg
cccggcgggcccgcgctggtggtggccacgcccggcgcggaaccggtcgccgacggcggg
tacggggcggcgctgctgctcgacggctgggcgctgctcggccgggccgacctgcgggcc
gccgaggaggcggtgcgccgctggatgggggccgccgccctggtgcgccggggcgaccgg
ggcggccggatcgtggtggtcgccgagtcctcgctggcccccgtgcaggcgctggtgcgc
tgggacccggtgtggcacgccgggcaggagctggccgcccgcgccgagctgggcttcccg
cccgccgtgcggatggccacgctcgacgcgtccccggacgcgctggccgtcctgctggag
gagctgcggctgcccgagcgcggcgaggtgctgggcccggtgccgctgggcgaggagcgc
gagcgggcgctggtgcgggtgcccaggggcgacgggcgggcgctgtcggcgtccctgtcg
gacgtgctgtcggtccgcagcgcccgcaaggagaccgaacccgtgcgggtgaaggtcgac
ccgctcgaagtgctctga
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