Acropora millepora: 114954171
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Entry
114954171 CDS
T06134
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
amil
Acropora millepora
Pathway
amil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114954171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114954171
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114954171
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114954171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
NOT1_connector
ARM_Cnot1
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
114954171
NCBI-ProteinID:
XP_044167139
LinkDB
All DBs
Position
Unknown
AA seq
2459 aa
AA seq
DB search
MSSCVDSLSLALGQISFAVNDLTKKNYKATIKEVHELIEKHGYEAEHHLFRCLFSFIDFT
GDGKNNGKDFLQCQFLIQECQMLVSKPNFSSILCSAIETPEHKQRTLRPSSQLLPNMSRV
LKLNKVQEVIFGLSLLHSSNQDLKNHAGQFVKHKLPDLLRSYIDADVGGVQEGGLTDVAI
EVLHRLLTHVVHGPRDQVGVGDDQVTAFLETLKKDFPKEHVPVVLSPLLYPDLQDISPDN
LIPETSVFSKTVMEDDLADFIGEIGYSSCSSVDECKNTLIQFGVQDITPSSVARVIGMMV
KTMYDLGEDVPIQNYGSSSASVDKLGLGELTPGPVAWNVEVFVQALKETVPLLSWRQVIQ
EFDYPEFHVPSREGLQLLFTACHRGLMEIFPVDVLYRTWTNTEGQLSWIQQILSNPDVFC
FTDYPCHTVVIDLLKTAPEDDNRETAPWKSLNLSETLLRLAEAGHYETVRSVFAFPLKHC
PDVLLLALLQINPLWHTLRNELVLQLIPVFLANHPNSGSVLHYVWHGQGQSASIRQLVMQ
AMAEWYSKGDMDQGRLSRILDVAQDLKALSMLLNGSPFVFVIDLAALASRREYLKLDKWL
KDKLKEHQEEFAQACVVFLRRRCPHLLGVSLDKELPKSVQLPQETVVTMLSCLQSFLGQA
SPDLADTISQMLTNHGPLVKVRPSAAVVGIPFKRQGSLDGGQLTNVLAGQLDALTGLNIP
TSSLPPTPATPTSQLPSFPPHPLTGTVLGPSGGLEAVGTIGSVLSSKAAVQKPPSQLGQL
PLSTPTATSSSGLQSPSFSSSQTPWLQQFHQSGSLAQSMGGSAMDNARLLAGLGIQKQLS
GNSLLQQQQSPQQQTALLSQPRNPADKLRTVSTADVSQVWPGMDQTFTKEVEDEANSYFQ
RIYNHPPNPTISIDEVLEMLKKFKDSPVKKERDIFLCMLRNLFEEYRFFPQYPDKELHTT
ACLFGGIIEQGLVTYMALGIALRYVLEALRKAFASKMYMFGIAALDRFKTRLKDYPHYCQ
HLASIPHFEEFPPSLIEYIKYGQQSREPLLGGRTIQEPLTSRLLSRAPPTLSSASVSSTF
TSTAASRSVPFGPNTPLGTSVPLTPSIPLVPSISSTSTSVSSAKSTSVPDIVPASSPVRG
REPSIATANNIDTLLGATETSEIVQPPESVQDKVHFIFNNISQTNLHQKAEELRSLIQAE
HILWVTQYLVMKRASIEPNFHQLYLEFMESVELTNFAKEVLKETYRNIKVLLQSDKVPAN
FSDRSLLKNLGHWLGLQTLARNKPILMKDLDVKSLIIEAYFKGQQEMLYVVPFVAKVIES
SAKSKVFKPPNPWVMAIMSVLVELHQMPDLKLNLKFEVEVLCNTLSLEMKEMKASELLKD
PERLKHIPHQLSSPEKEKQPVVSNTSTPTPTGSSQQGQPPVAPPPPQYAYQEINVASLAG
LAPHIQINGQTPLFQQHPHLKQFVRPAIERAVQELVHPVVERSIKICLTTAEMIVKKDFA
LDPEESRMRAAAHHMVRFMTAGMALITCREPLLISISNNLRSNFLAALRGANQQQKDMIE
RAASLVSEENTELACAFIQKTAVEKALPEMDKRLTTEFDLRRIARSEGRRYCDPVVLTYQ
AERMPEQIRLKVGGVNANQTAVYEEFARSIPGFQPPQAGESITTPPLPKPVGILGNAEAF
MPDEVVQILNKCAAEIEQHLHAIIAPQTNQHVVTIHSLLDTLVQARISRDNMAALRLLHK
AVEGLLEGVGPLANDAELSLRYRDCHLIVLRGLQDPRGYGIMWTARHVTKFVCECPAELK
FNVEAIDLLIRSHLLNMREFDLHLVQCIDNGHNLQALHFAIQLAKYVSDDKQSSHVTEND
LYHTIEALTRIAHSRQNSEGLSSLLDSNHNGSISSQTVSSHHEMGDNKAPGGPTSLTSGV
SSGVGVTYNDDPPGLHEKVEYLLREWVRLCHQPGAGKESEKAFSTFVSLLHQQGILRTDE
LITRFFRISTELCVEVTYRALADHPNSPTTARAKCYNTLDAYCRLIALLVRHSGDASNNV
TKINLLSRVLGTVATVLFQDHEIRHAEFQQLPYHRIFIMLLVELNQPEPILEAINFQVLQ
TFSTVFHALRPSRAPGFAYAWLELISHRLLMSKLLLNTPQQKGWVLFQQLLIDLFKFLAP
FLRNAELAKQTHLLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPNCIQMRNLILSAFP
RNMRLPDPFTPNLKVDLLTDIAHSPRILTILPRQSSQLALKGSDSYLKTRAPVTFLTELR
SHLQVSNEPGTRYNVPLMNALVLYVGTQAITYIHSKSGTPSMSTITHSSHMDIFQNLAVD
RDTEGRYLFLNAIANQLRYPNSHTHYFSCVLLYLFAEANTESIQEQITRVLLERLIVNRP
HPWGLLITFIELIKNHQYKFWTHEFVHCAPEIEKLFESVARSCMQQKQAPPRETNENRE
NT seq
7380 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatgtgtggactctctgtccttggcactaggacaaatcagttttgcggtcaat
gatttgacgaagaagaactataaagctaccataaaggaagtacatgagctcattgaaaaa
catggttacgaagcagagcatcacttattccgttgtctgttttccttcattgactttact
ggtgatggaaaaaataatggcaaagacttccttcagtgccagtttctcattcaagaatgt
cagatgcttgtctccaaacccaatttttcatctattctgtgttcagccattgaaacacca
gagcataagcaacgtacactgagaccttcatctcaattgctccctaatatgagcagggtt
ttgaagctcaacaaagtccaagaggttatctttggtcttagccttcttcattcgtcaaac
caagatctaaaaaatcatgctggccaatttgtaaaacacaaattacccgatctcttgagg
tcatacatagatgcagatgttggaggtgtacaggaaggagggttaactgatgttgctatt
gaggtattgcatcggcttcttacacatgtggttcatggcccaagggatcaagttggggtg
ggagatgatcaagttactgcctttttggaaacattgaagaaagattttcctaaggaacat
gttcctgttgtcctttcaccacttctgtacccagacttgcaagatatttcacctgacaat
cttatcccagaaacgtctgttttttccaaaactgtgatggaagatgatttagctgacttt
attggtgaaataggttattctagttgttcaagtgttgatgaatgtaaaaatactctcatt
cagtttggtgttcaagatataactccatcatcagtagcaagagtcattggaatgatggtc
aaaacaatgtatgaccttggtgaagatgtcccaattcaaaactatggcagcagttctgct
tctgtggacaaacttggtcttggtgaacttactccaggacctgtagcatggaatgtggaa
gtctttgtccaagctttgaaagagacggttcctctcctttcgtggcgacaagttattcaa
gagtttgattatcctgaatttcatgtccctagccgggaaggactccagctgttatttacc
gcttgtcatcgtggtttgatggagatttttcctgtggacgtgttgtacaggacgtggact
aacactgaaggccagttgtcatggatccaacaaatcctatccaatccagatgtgttttgc
tttactgattacccatgtcacacagtagtgattgatctgctgaagacagcaccagaggat
gataacagagagacagccccatggaagtcactcaatctgtcagaaacacttctgagatta
gctgaagcaggtcattacgagactgtcagatcggtatttgcttttcctttgaagcattgc
cctgatgttttactgctggctttacttcaaattaatcctttgtggcatacgttgcggaat
gaacttgttttacaacttattccagtgttcctggccaatcatcccaattctggcagtgtg
ctacactatgtgtggcatggacagggccagtcagcatcaattcgtcaacttgttatgcag
gctatggctgaatggtattcaaagggcgacatggatcaaggaaggctgtcaagaatacta
gatgtggctcaagacctaaaggcactgtccatgttattgaatggctccccatttgtgttt
gtgattgaccttgctgcccttgcatctcggcgagaatatctaaagttggacaagtggttg
aaggacaaactaaaagaacatcaggaggaatttgcccaagcatgtgttgtctttctgcga
cgccgttgtccccatttattgggtgtgtccttagacaaagaacttccaaagagtgttcag
ttgccacaggaaacagttgttactatgctttcctgtttgcagtcatttttgggtcaagca
tctcctgatttggcagacaccataagtcaaatgttgaccaaccatggtcctcttgtcaaa
gttcgaccaagtgctgctgttgtcgggattccatttaagagacagggaagcttggatgga
ggacagcttacaaatgtcttggctggccagcttgatgcactcacagggcttaacattcct
acgtcatctcttccacccacacctgcaactcccacatctcagctgccatcatttccaccc
caccccttaactggtactgtactgggaccctcaggagggctagaagctgtaggcaccatt
ggttcagttctctcatcaaaggcagcagtgcagaaacccccatctcaattggggcagctt
cctctcagcacaccaactgcgacttcaagttctggtcttcaatcgccaagctttagttcc
tcacagacaccctggttacaacagtttcaccaatcaggtagtctagcacagtctatggga
ggatcagcaatggataatgcaaggttgttagctggtctaggaattcaaaaacagctcagt
ggaaattccttattgcaacagcagcaatcaccacagcagcaaacagcactcttgtcccaa
ccaaggaatccagctgataaattgcgcactgtttcaacagcagatgtttctcaggtctgg
ccaggtatggaccagactttcacaaaggaggtagaagatgaagcaaactcttactttcaa
aggatttacaatcatcctccaaatccaaccatcagcattgatgaagtgttggaaatgctc
aagaagtttaaagattcacctgtcaagaaggagagagatatatttctttgcatgcttcga
aacctgtttgaagagtaccgcttcttccctcagtacccagacaaggagcttcacacaaca
gcctgcttatttggtggtataattgagcaaggcctagtgacatacatggcgcttggaatt
gcacttcgctatgtcttggaagcactgaggaaagcttttgcttccaaaatgtacatgttt
ggaattgctgccttggacagattcaagacaaggctcaaagactatcctcactactgccag
catcttgcatcgattccacactttgaagagtttccaccatccttgatagaatacattaag
tatggacagcaatcaagggaaccactgcttggaggaaggaccattcaggagcccctaaca
tcaagactcctgagccgagcgccaccaacactatccagtgcttcagtcagctcaactttt
accagcactgcagccagcagatcagttccttttggtcctaatactcccttgggaacctca
gttcctctgactccttccatacctttggttcccagtatcagctcaaccagcacctctgtc
tcctctgccaaatctacatctgtgccagacatagttccagcctcgtcaccagttagaggc
agggaaccatccattgcaacagcaaataacattgatacacttctgggtgcaacagaaaca
agtgaaatagttcaaccaccagaatctgtgcaggataaagtgcacttcatctttaacaac
atatcacaaacaaatttgcatcaaaaggctgaagaactccgcagtttgatccaagctgag
cacattttgtgggtgacacagtaccttgtcatgaaaagagcctctatagaacccaacttc
catcaactgtacttggagtttatggaatcagtagaattgacaaactttgcaaaggaagtg
ctgaaggaaacgtaccgaaacatcaaggtgcttctgcaatctgataaggttccagccaat
ttctctgatcgatcattgctgaagaatcttggccattggctaggattgcagactttggca
agaaataaaccaatccttatgaaggatcttgatgttaagtctttgatcattgaagcttat
ttcaaggggcaacaggaaatgctgtatgtggttccatttgttgctaaagtcatagaatca
tcagctaagagcaaggtgttcaagccacccaatccctgggttatggccatcatgtctgtg
ctagtagaactgcatcaaatgccagatttaaagctgaatctcaagtttgaagtggaggtg
ctttgtaatacactgtctctagaaatgaaggaaatgaaagcctcagaacttttaaaggat
cccgagagattaaaacacatcccgcaccaactgtcgtctcctgaaaaagaaaagcaacct
gttgtcagtaacacctccacccctacccccacaggatcatctcaacaaggacagcctcca
gttgcgcctccacccccacaatatgcgtatcaagaaatcaacgtagcctctttggctggt
ttggcacctcacattcaaatcaatggacagaccccattattccaacagcatccccattta
aagcagtttgtgcgtccggccattgaaagagctgtgcaggaacttgttcatccagtggta
gagagatctataaaaatctgccttacaaccgctgagatgattgtaaaaaaggattttgcg
cttgaccctgaagagtctcggatgagagctgccgcacatcacatggtgcgtttcatgaca
gcaggcatggcgttgatcacgtgtcgagagccgctactgatcagtattagcaataatctc
agatcaaacttcctcgctgctcttaggggtgcaaaccagcagcagaaagacatgattgaa
cgtgcagcatcgttggttagcgaggaaaatacagaactggcctgcgctttcattcagaaa
acggctgtggaaaaggctttgccagagatggacaaacgattaaccacggagttcgatctt
cgtcgcattgctcgcagcgagggccgccgatactgtgatccagtggtgttgacttaccaa
gcagagcgcatgcctgaacagattcgattgaaggtcggaggagtaaatgccaatcagacg
gctgtctacgaagagtttgctcgcagcatacccgggttccaacccccacaagcaggggaa
tcaatcaccaccccacccctgcccaaaccagtgggaatacttggcaatgctgaggccttt
atgccagatgaagtggtacaaattttaaataagtgcgcagcggaaattgagcagcatctt
cacgccatcattgcgccacaaaccaatcagcacgtagtcaccatacacagcctgctggac
actttggtgcaggcgcgcatatcaagagacaacatggctgcacttcggcttttacacaag
gcagtggaaggtttgctggagggtgttggcccgttagcaaatgacgcagaattgtcacta
agataccgcgattgtcatcttatcgtgctaagaggtctccaggacccacggggctacgga
atcatgtggacagcaagacacgtgaccaagttcgtgtgtgaatgccctgcggagctgaag
tttaacgtggaagctattgatctgttgattcgcagtcatttgttaaacatgagagagttt
gatcttcaccttgttcagtgcattgataacggtcacaaccttcaagcgttacactttgct
attcagttggcgaagtatgtgtcagatgacaagcagagttctcatgtcacagagaacgat
ctgtaccatacaattgaagcattgacaaggatagctcacagcaggcaaaattctgaagga
ctgtcgtcgcttctagactccaatcacaatggttccatttcatcgcagactgtgagctcg
catcatgagatgggtgataacaaggctcctggaggcccaacatccttaacttccggtgtg
tcgtcaggcgttggtgtcacatacaatgacgatccaccggggctgcacgaaaaggttgag
tatttgttgagagaatgggttcgcctttgtcaccaaccgggagcaggaaaggaaagcgag
aaagcattttccacgtttgtgtccctgttacaccagcaagggattctgcgaacggatgag
ctgatcacgaggttctttcgcataagcaccgaattgtgtgtagaagtaacttaccgagct
ctggcagaccacccgaacagcccaaccacagcacgagccaaatgttacaacaccctagat
gcctattgtcggttgattgcactgctggtgcgccactcaggcgatgcatcgaataatgtc
accaagataaacctcttaagcagggttcttggaacagttgctaccgtgttattccaggat
cacgagattcgccacgcggagttccaacagctgccatatcaccgtatatttattatgcta
ttggtcgaactaaaccaacccgagccgatcctggaggcaatcaatttccaggtgttgcag
acattcagtactgtgtttcatgcacttcgtccgtcgcgggctccaggctttgcctacgct
tggctagagttgatatctcatcgcttgctcatgtccaagcttctactcaacacaccacag
cagaagggatgggttttgttccagcagctattgattgacctgttcaagtttttggcgcca
tttttgcgcaacgctgaactggccaagcaaactcacctgctttacaagggaacattgcgg
gtcttgctggtgcttcttcatgactttccagagtttctttgcgattatcacttcagtttc
tgtgacgtcatacctccaaactgtatccagatgagaaatctgatcctaagtgcctttcct
cggaacatgaggctaccagatccctttacaccaaacttaaaggttgatttgttgacggac
atcgcgcattctcctcgtatcctgaccattttgcctcggcaatccagccagctagcttta
aaaggatctgattcgtatctgaagacacgcgcgccggtgacattcttgacagagctcagg
tctcatttgcaggtatccaatgaaccaggaacccgctataacgtacccttgatgaatgca
ttggtgctttacgttggtacccaggccatcacctacatacacagtaagagtggtacaccc
tccatgtccactatcactcattcttcccacatggacatcttccaaaatttagccgtggac
cgggataccgaaggccgatacctattcttgaacgctattgcaaaccagctgcggtacccg
aatagccacacgcactacttcagctgtgttctgctgtacttgtttgctgaagccaacaca
gaatccattcaagaacagatcacaagggttttgctggagcgattgatcgttaacagacct
catccatggggtcttctgatcacattcatcgagcttatcaagaaccaccaatacaagttt
tggacgcacgagtttgttcactgcgctccggagattgaaaagttgttcgagtcagtagcg
cgcagttgcatgcagcagaaacaggcgccaccgcgagaaaccaatgaaaacagagagtga
DBGET
integrated database retrieval system
