Acropora millepora: 114976086
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Entry
114976086 CDS
T06134
Name
(RefSeq) short transient receptor potential channel 4-like isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amil04040
]
114976086
Ion channels [BR:
amil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114976086
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ank_2
TRP_2
Ank
Ank_KRIT1
Ank_4
Ank_5
RVT_N
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
114976086
NCBI-ProteinID:
XP_044173373
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Position
2:36333382..36362347
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AA seq
748 aa
AA seq
DB search
MEATDIFLQELTVDGTDGQQENVKLQRKLFKATRKGDLERIKSLTHLKCEINCVNHSGKA
LLQVAAELSDLSQRHEVIAALLSSGADLEFGMLHAIRDNNVKTVQTLLSFYDTAPSPHPR
TQSKYQGHVTPLILAAWLQHFRIVKLLLDHGFTISDVKWPRADFTGEAVEKLGPAVYRLN
RYRALASPVYIALTFLQNVESGPDPVHRACVLNKELHDTADQEYEFSKEYLELSDNCKEF
AVALLNECRSMKEIRCVMERASKCANVALNTQGKCLNILEFAIATRNEKFVCHPYSQLAL
NSEVYKNVPYLEKSSWKQAVLLLLAAVAFPLLLLVWLVAELCCPNHSISRMFHSPCVKFL
ITCGSYQTFLFLLALTSFHSSQSDEFLEYSVVDWLVLLFVIGLLVEIAKDIYQQGKDRFC
SDPWNYLSVALVTSFAIHYAVWWSGRALLVEKVDSLTWKTHTKGGYSVILASYCFFAVAI
LLSFTRNLSFIQASSITGPLLHAFTQMLVDVARFFLYFVFVFLAFAVSFTKLYLQFDKAR
RHFHVDAETTNQTTDPLRLERFGNSMKTIFWSLFGEIDESGFQIDEDGYGAIWKTGMVLF
GAFNIVAVLVALNMLIAILNESYTRISEDLDTEWKFSRTKLWLGWIYKKGVLPPPLNVLY
TFLPLRWAVERLFTKFGGGREASDGKFVFRVSAKHKQKPARRSTINEAERREVIRNLVLR
YLAKTSCHSETETQSSDSEDGNEAESGL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggaggctactgatattttcctacaagaactgaccgtcgacggtacagatggccagcaa
gagaatgtcaaattgcaacgaaaacttttcaaagcaacaagaaaaggagatttggagaga
atcaagagccttactcacctgaaatgcgaaattaactgcgtaaaccactctggtaaagca
ttgcttcaagtagccgcagaactgagtgacttgagccagcgtcatgaagtgatagcagct
ttactgagcagcggagctgacctggagtttggtatgttgcatgctatacgcgacaataac
gtaaaaaccgtgcaaacgctgttgtcattttatgacactgcaccatcacctcatcccagg
actcaatcaaaatatcaaggacacgtcacaccgctgatactagctgcttggttacagcat
tttcgcatcgtcaaactcctcttggatcatggatttaccataagtgacgtaaagtggcct
agggcggactttaccggagaggccgtggagaaactgggacctgccgtataccggttaaat
aggtaccgcgcacttgctagcccagtatacatcgcgctgacatttcttcaaaacgtggag
agcggtccagaccccgtccacagagcatgcgtgctcaacaaggagctacatgatactgct
gatcaggaatacgagtttagcaaagaatatttggagcttagtgataattgcaaagagttt
gcggtggctctacttaatgaatgtcgatcaatgaaggagatcaggtgcgttatggagagg
gcgagcaaatgcgcaaatgtggctcttaatacgcaaggaaagtgtttaaacatcttggag
tttgccattgcaaccagaaatgaaaagttcgtctgtcatccttacagtcagctagcatta
aactcagaagtgtacaaaaacgtcccttatttggagaaaagttcttggaaacaggctgtg
ttactacttttggcggctgtcgcgtttcccttgttgctcttggtatggctggtggcggaa
ctttgttgtcccaatcattcaatttccagaatgttccattcgccttgtgtcaagttcctt
attacctgtggttcctatcagacatttcttttcttgctggctcttacgtcgttccattcc
tctcagagtgacgaatttctggagtacagtgttgttgattggttggttctgttgtttgta
attggcttgcttgttgaaatcgctaaagacatctaccaacaggggaaggatcgcttctgt
tctgacccctggaattatctatctgtagcattagtgacgtcgtttgccattcactatgcc
gtgtggtggtctggccgggcactgttggtggaaaaagttgattccttgacttggaagact
cacaccaagggtggctattcggttatactggcttcttattgcttctttgccgtggcaatc
ttattatcatttacccggaatctttcatttatccaagccagctcaatcacaggtccacta
cttcacgctttcactcagatgctggtagatgtcgcccggttctttctgtattttgttttt
gtatttttggcgtttgccgtgagcttcactaagctttacttacaatttgacaaggccaga
cgacattttcacgtcgacgcagaaacaacgaatcaaaccacggatcctttgcgtctggaa
agatttggaaacagcatgaagacgatcttttggtcgctgtttggagagattgatgaaagc
ggtttccaaatcgatgaagacggctatggagcaatatggaagactggaatggtgcttttt
ggtgcctttaacattgttgcagttcttgttgcactaaacatgttaatagcaatactcaat
gaatcttatactcggatatcggaagacttggataccgagtggaagttcagcagaacaaaa
ctgtggttgggctggatttacaagaaaggcgttcttcctcctccacttaatgttctttac
actttcttacctctccgttgggctgttgagcgtcttttcaccaaattcggcggtggaaga
gaagcctcggacgggaagtttgtcttccgtgtttcagcaaagcacaagcaaaaacccgcc
aggaggtcaacgataaacgaagcggagagacgagaggtgattcgcaatcttgtgctgagg
tacctggccaagacgtcttgccactctgagactgaaacccagtcaagtgactcggaagac
ggaaacgaggctgagtcagggttgtaa
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