Alligator mississippiensis (American alligator): 102559238
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Entry
102559238 CDS
T03087
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102559238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amj02000
]
102559238
Transporters [BR:
amj02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102559238
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
102559238
NCBI-ProteinID:
XP_006263886
LinkDB
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Position
Un
AA seq
638 aa
AA seq
DB search
MSSNWKVISSLPHPRRPVMTAEKTIPIINGKPEDALDPEASSTNLVHSNDKKVHERGHWN
NKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFT
SEGGITCWRKICPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWATCGHE
WNTENCVEFQKLNMSNCSQISLQNATSPVMEFWERRVLAISEGIEHIGNLRWELALCLLA
AWTICYFCIWKGTKSTGKVVYVTATFPYMMLLILLIRGVTLPGASEGIKFYLYPDLSRLS
DPQVWVDAGTQIFFSYAICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFS
VLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVC
VESLVTAVVDMYPKIFRRGYRRELLILALSIVSYFIGLIMLTEGGMYVFQLFDSYAASGM
CLLFVAIFECICIGWVYGSNRFYENIEDMIGYKPLTLIKWCWMFLTPGICAGIFIFFLVK
YKPLKYNNVYTYPDWGYGIGWMMALSSMVCIPLWICIKLWKMEGTILEKFRKLIVPSPDL
KMRGKLGAGAYAATVNDCDAKLKGDGNISAITEKETHF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaattggaaagtgatttcttctcttccccaccccaggcgaccagtcatgaca
gctgaaaagaccattcccatcattaacggcaagccagaagatgctttggacccagaagcc
tccagtaccaaccttgtccacagtaatgataaaaaggtgcacgaaaggggccactggaac
aataaggttgaatttgtcctgtctgtggctggggagattatcgggttaggaaatgtgtgg
aggttcccctacctctgctacaagaatggaggaggtgctttcctcattccatatgtggtt
ttctttatttgctgtggaataccagtattttttctggagactgccctgggacagtttact
agtgaaggaggtattacatgttggaggaaaatttgccctctctttgaaggcattggatat
gctacccaagttattgaagcacatttaaatgtttattacatcatcattttagcatgggct
atcttctatctatttaactgctttaccacagagctcccatgggccacttgtgggcatgaa
tggaatacagaaaactgtgtggaatttcagaagcttaatatgagcaactgcagtcaaatc
tcattacaaaatgctacttctccagtcatggaattctgggagcgcagggtactagccata
tcagaaggaattgaacatattgggaatcttcgctgggaattggcattgtgtctccttgct
gcttggactatctgctacttctgcatttggaaaggaaccaagtcaactggaaaggtggta
tatgtaacagccacattcccatatatgatgctactgattcttcttattcgaggagtaact
ttaccaggggcttctgaaggaataaaattctacttgtatcctgatctatccagattgtct
gacccacaggtttgggtggatgctggtacacagatatttttctcctatgccatctgctta
ggatgcttgacagctttggggagttacaacaactacaataacaattgctacagggactgc
attatgctctgctgtttgaacagtggcacaagttttgttgctggttttgccatcttttct
gtccttggttttatggcttatgaacaaggggtacccattgcagaagtagcagaatcagga
ccaggacttgcattcattgcctatccaaaagctgtcaccatgatgcctctttctccactg
tgggcagctttgtttttcatgatgcttatattccttggattggatagtcagtttgtgtgt
gttgaaagccttgtgacagctgtggtggatatgtacccaaagattttccgaaggggatac
agaagagaactgttgattcttgccctttcaattgtgtcatacttcattggcctaataatg
ttaacagagggtggaatgtatgttttccagctgtttgactcctatgcggctagtggaatg
tgccttctttttgttgctatatttgaatgtatctgcataggctgggtttacggcagcaat
cgcttttatgaaaacattgaagatatgattggatacaagccattgacattaattaaatgg
tgttggatgttcctaactcctggtatttgtgctggaatcttcatctttttcctggtgaaa
tataagcctttgaaatacaacaatgtatatacctaccctgactggggctatgggataggg
tggatgatggccctctcgtccatggtttgtattcctttgtggatctgcattaagttatgg
aagatggaaggaaccattctagagaaattcaggaaactgattgtacctagcccagatctg
aaaatgagagggaagcttggtgcgggagcatatgctgctacagtaaatgattgtgatgcc
aaactgaaaggtgatggcaacatttcagccatcacagagaaggagacgcatttctga
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