Alligator mississippiensis (American alligator): 102562026
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Entry
102562026 CDS
T03087
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102562026 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102562026 (PNPT1)
03016 Transfer RNA biogenesis [BR:
amj03016
]
102562026 (PNPT1)
Enzymes [BR:
amj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
102562026 (PNPT1)
Messenger RNA biogenesis [BR:
amj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
102562026 (PNPT1)
Transfer RNA biogenesis [BR:
amj03016
]
Prokaryotic type
tRNA degradation factors
102562026 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
Phos_pyr_kin
DUF892
Motif
Other DBs
NCBI-GeneID:
102562026
NCBI-ProteinID:
XP_006272550
LinkDB
All DBs
Position
Un
AA seq
788 aa
AA seq
DB search
MAACIGCCRGGLRPRPTWHHPFLGAVRRCLGPGSRLAPLLQARGFGGDQAVTVDLEGRNL
KFSSGKLARFADGCAVVQLGDTSVMVTAVSKTTSSVSQFMPLVVDYRQKAAAAGRIPTNY
LRRELGTTDKEILTSRVIDRSIRPLFPAGYYYDTQILCNLLAVDGINDPDVLAINGASAA
LALSDIPWNGPVGAVRVGIVDGKLVINPTRKEMSSSMLNLVVTGGPQSQIVMLEAAADNV
LQQDLSHAIKTGLKYTQQIIQGIQQLVKKQGTAKRVVENLFVAPAEIVKYTKELATDELC
KVFKDFNHDKISRDEEINKIRLKTEEQLREKFPEAEPYAIMESFSVVSKDVFRNLVLSNC
VRCDGRDLTSLRNIHCEVDVFNMLHGSALFQRGQTQVLCTVTFDSLESSVKSDLITTAVS
GIKDKNFMLHYEFPPYATNEIGRVTGMNRRELGHGALAEKALKPIVPQDFPFTIRVTSEV
LESNGSSSMASVCGGSLALMDAGVPVSSAVAGVAIGLITKTNPMNNKEIEDYRLLTDILG
IEDYYGDMDFKMAGTNKGITALQADIKLPGIPLRIVMEAIQQATVAKREILKIMNQTIAK
PRPTRKENGPVVETVHVPVSKRTRFVGPGGYNLKKLQAQTGITLSQLDEETYSVFAPTPS
AMNEAREFISAICQDDQEVLLEFGAVYAATIVEIRDAGVMVKLYPNMTPVLLHNSQLDQR
KINHPSALGLQVGQEIKVKYFGRDPSDGRMRLSHKVLQSPAAPVVKTLTDRNSIVMSGTS
PQSSSSSS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttgcataggctgctgccgcggggggctgcggcctcggcccacgtggcatcac
ccgtttctaggcgccgtgcggcgctgtctaggcccgggctctcgcctggcgccgctcctc
caggcccggggcttcggcggcgaccaggcggtgaccgtggacttggagggcagaaacctg
aaattttcctctggaaaactagctagatttgctgatggatgtgctgtagtgcagttaggt
gacacatcagtgatggttacagcagtcagtaaaacaacatcttctgtatcccagttcatg
cccctggtggttgattatcgtcaaaaagctgctgcagcaggaaggattcccacaaactac
cttaggagagagcttggtactactgataaagaaattcttacaagcagagtgatagatcgg
tcaattaggccactcttcccagcaggctactactatgatacacagatcctttgtaatctt
ttagcagtagatggtatcaatgaccctgatgtcctggcaattaatggagcatctgcagca
cttgcattatcagatattccttggaatggtccagttggtgcagtacgggtaggaattgtt
gatgggaaacttgttattaacccaactagaaaagaaatgtcatctagtatgttgaactta
gtggtcactggaggccctcaaagtcagattgtcatgttggaagcagcagctgacaatgta
ctgcagcaggacttgtcccatgccatcaaaaccgggttaaagtatacccagcaaataatt
caaggtatccaacagctggtgaaaaaacagggtactgccaagagagttgttgagaattta
tttgttgctccagcagaaattgtgaaatacacaaaggaactcgcaactgatgagctatgt
aaagtatttaaagattttaaccatgacaaaatttctcgagatgaagaaattaacaagata
agacttaaaacagaagaacagctgagagaaaaatttccagaggctgagccttatgcaatt
atggaatccttcagtgttgtttcaaaggatgtttttaggaaccttgttctgagtaactgt
gtaaggtgtgatggtagagacctgacttctctcagaaatatccactgtgaagtggacgtg
tttaatatgctccatgggtctgcattatttcagagaggtcaaacacaggttctctgtaca
gttacatttgattcattagaatctagtgtgaaatccgatcttatcacaacagctgtgagt
ggaataaaagataaaaactttatgctgcattatgagttccctccttatgcaactaatgaa
attggcagagttactggtatgaacagaagagaacttggacacggtgctcttgcagagaaa
gctttgaagccgattgttccccaagatttcccattcacaataagagttacttcagaagtc
ttggaatcaaatggatcctcttcaatggcttctgtatgtggtggaagtttggccttaatg
gatgcaggagttccagtatccagtgctgtggcaggtgttgcaataggtctcattaccaaa
actaatcctatgaataataaagaaattgaggattatcgtttgctgacagacatcctggga
attgaagattactatggcgatatggatttcaaaatggctggtactaataaaggaataact
gctctgcaggctgatataaaactacctgggataccactaagaattgtaatggaagccatc
caacaggctacagttgcaaagagagaaatcttgaaaattatgaaccaaacaattgcaaaa
cccagaccaacaagaaaagaaaatggaccagttgtagaaactgttcacgtcccagtgtca
aaaagaacaagatttgttggcccaggtggttataatttaaaaaagctgcaggctcaaact
ggtataactttaagtcagttggatgaagagacctattctgtgtttgctccaacacctagt
gctatgaatgaagcacgagagtttatcagtgcaatctgccaagatgatcaggaggttctg
ttggagtttggagctgtctatgcagccacaatagttgaaattagggatgctggagtgatg
gtaaaactgtatccaaacatgactccagtactactacataattcacaacttgatcagaga
aagattaaccatcccagtgctctaggattacaggttggacaggaaattaaggtgaaatat
tttggacgtgatccaagtgatggcagaatgagactttcccacaaagtacttcagtcccca
gcggcacctgtggtgaaaaccctaactgacagaaacagtattgtaatgagtggtacaagt
ccacagtcctctagctcatcatcctaa
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