Alligator mississippiensis (American alligator): 102562364
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Entry
102562364 CDS
T03087
Symbol
LMX1AL
Name
(RefSeq) LIM homeobox transcription factor 1-alpha
KO
K09371
LIM homeobox transcription factor 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102562364 (LMX1AL)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
102562364 (LMX1AL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
DUF5558
Motif
Other DBs
NCBI-GeneID:
102562364
NCBI-ProteinID:
XP_006277108
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All DBs
Position
Un
AA seq
412 aa
AA seq
DB search
MARPVRPISVLTPPLPPAADPRPAPSMKTEEAPSCLQQATPVLGFGSDSKMREVCAGCDT
PISDRFLLRVNERSWHEGCVKCTACLQPLSGTCYCRNRQLYCKHDYEKLFQTKCSSCLKA
IAPSEFIMRVLENVYHVHCFYCCECERRLQRGDEFVLKEGQLLCRSDYEKEKEMLSAISP
APTESVKSEDEDGSHPHGKGGDEGKDHKRSKRPRTILTTQQRRAFKASFEVSSKPCRKVR
ETLAAETGLTVRVVQVWFQNQRAKMKKIARRQQQQQQQQQEQDQLGNPRLGTGRGTGRSS
RQSNDDSEDGASVHGLDGLMVPYPRIPQQQLLPLDQNSYSTDLYRQGLTPPQLPGDHLHP
YDSEGVFHDMDSDSIGHLGDCLLSTAEASLLQARVGNPIDRLYSMQSSYFTS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcccggccggtccggcccatctccgtgctaacgccgcctctacctcccgcagccgat
ccccgcccggctccgagcatgaagaccgaggaggctccctcctgcctgcagcaggccacc
ccggtactgggctttggatcggactccaaaatgcgggaggtttgtgccggctgtgacacg
cccatctccgaccgcttcctcctgcgagtcaacgagcgctcctggcatgagggctgtgtg
aagtgcacggcctgtctgcagccactttcaggcacctgctactgccgcaaccggcagctg
tactgcaagcatgactacgagaagctgttccagacgaagtgcagcagctgcctgaaggca
attgccccatccgagttcatcatgcgggtgctggagaatgtctaccatgtccactgcttc
tactgctgcgagtgcgagcggcgcctgcagcgtggggacgagtttgtgctcaaggagggg
cagctgctatgccgcagtgactatgagaaggagaaggagatgctgagcgccatcagccct
gcgcccactgagtctgtgaaaagcgaggatgaggatggcagccacccacatggtaaaggc
ggcgatgaaggcaaggaccacaagcgctccaagcgcccgcgcactatcctcaccacccag
cagcgacgagcgtttaaagcctcctttgaggtctcctctaagccctgcagaaaggtgaga
gagacccttgcggctgagaccggcctgaccgtccgagtagtgcaagtctggtttcagaat
cagagagccaagatgaaaaagattgcacgcaggcagcagcaacagcagcagcagcagcag
gagcaggaccagctgggcaatccacgcttggggacaggccgtggcacaggccgcagcagc
cggcagagcaatgatgacagtgaagatggcgcaagtgttcatggactggacggactcatg
gtcccctatccccggatcccccagcagcagctgctgcccctggatcagaacagctacagc
acagacttatacagacaagggctcacaccaccccagctgccaggagaccatctacatccc
tatgattcagaaggcgttttccatgacatggacagtgacagcatcggccacttgggtgac
tgcctgctgtcgacggccgaggccagcctcctccaggcgcgcgtggggaaccccattgac
cggctctactccatgcagagctcctacttcacctcctga
DBGET
integrated database retrieval system
