Alligator mississippiensis (American alligator): 102562719
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Entry
102562719 CDS
T03087
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03022
Basal transcription factors
amj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102562719 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
102562719 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102562719 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102562719 (GTF2H4)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102562719 (GTF2H4)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102562719 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
fvmJAB_N
Motif
Other DBs
NCBI-GeneID:
102562719
NCBI-ProteinID:
XP_019334342
LinkDB
All DBs
Position
Un
AA seq
406 aa
AA seq
DB search
MRMLFLEQPLPQAAVAFWVKKEYVKEQEESSDVLSGLRLWHTQLLPGGLQGLVLNPIFKE
NLRIALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVILHFMVGSPSAAVSQDLA
QLLIQAGLMKSTEPGEPPCITSAGFQFLLLDTSSQLWYFMLQYLQTAETRGMDLVEILSF
LFQLSFSTLGKDYSVEGMSDSLLTFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGISG
TTVDTHNQGFIIVETNYRIYAYTDSELQIALIALFSEMLYRFPNLVVAQVTRDSVQQAIA
NGITADQIIHFLRTRAHPVMLKQIPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQV
DFELLRNHARDLGVLVFENPAKRLMVVTPAGHSDVKRFWKRQKHST
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcggatgctttttctggagcagcccctcccccaggcagctgtggcattttgggtaaag
aaggaatatgtcaaggagcaggaggagagctcagacgtcttgtcggggttgcggctctgg
cacactcagctgctcccagggggcctccaggggcttgtcctgaaccccatcttcaaagaa
aacctgcgcatcgccttgctgggagggggtaaagcctggtctgatgataccagtcagctc
gggccagacaagcacgcacgggatgtcccatcactggataaatatgcggaggagaggtgg
gaggtgatcctgcatttcatggtgggttctccaagcgctgctgtcagccaggatctagct
cagctcctcatccaagctgggctgatgaagagcactgaacctggggagcccccctgcatt
acctctgctggtttccagttcctgctgctggacacctcttcccagctttggtacttcatg
ctgcagtatctgcagacagctgagactcgtggcatggatctggtagaaatcctgtccttc
ctcttccagctgagcttctccacccttggcaaggattactcagtggaagggatgagtgac
tctttgctgacgtttctacaacaccttcgggaatttggtctagtgttccagaggaagagg
aaatctcggcgctattaccctacccgtttagccattaacctgtcatccggtatctctggg
accactgtggacacccacaatcaaggcttcatcatcgtggagaccaattacaggatctat
gcctacacagattcggagcttcagatcgcactcattgcgctgttctctgagatgctgtac
cgcttccccaacctggtggtggcacaagtgactcgtgacagtgtccagcaagccatcgcc
aatggcataacagccgaccagatcatccacttcttgaggaccagagctcaccccgtgatg
ctgaaacagatcccggtgctgcccccgaccatcacagatcaaatccgcctctgggagctg
gagcgtgaccggctgcgcttctccgagggtgtcctgtacaaccagttcctgtcccaggtg
gactttgagctactgaggaaccacgcacgggacctaggcgtcctggtctttgaaaaccct
gccaagcgcctcatggtggtgacgcctgctggacactctgatgtcaagcgcttctggaaa
aggcagaagcacagcacatga
DBGET
integrated database retrieval system
