Alligator mississippiensis (American alligator): 102564806
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Entry
102564806 CDS
T03087
Symbol
CACNA1A
Name
(RefSeq) calcium voltage-gated channel subunit alpha1 A
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04010
MAPK signaling pathway
amj04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102564806 (CACNA1A)
04020 Calcium signaling pathway
102564806 (CACNA1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102564806 (CACNA1A)
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102564806 (CACNA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Tmemb_9
Motif
Other DBs
NCBI-GeneID:
102564806
NCBI-ProteinID:
XP_019354952
LinkDB
All DBs
Position
Un
AA seq
2464 aa
AA seq
DB search
MAMHAVARSAMPSPPSYYDAVHDGCGLPDAPSHDGRYHQMSPEQEPPALKRRGGVVDHRD
VIMAHQAHKIHSTPQAQRKEWEMARFGDEMPARYGAGGVGGAGSGGAAGGGGSRGAGGGR
QGGPPGAQRMYKQSMAQRARTMALYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEW
PPFEYMILATIIANCIVLALEQHLPDEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGF
AFHKGSYLRNGWNVMDFVVVLTGILAKVGSEFDLRTLRAVRVLRPLKLVSGIPSLQVVLK
SIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKFHTTCFDSVTGEIKDRVPCGMDEPAR
TCPNGTRCSKYWEGPNYGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASGNTWNWLY
FIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKA
EEVILAEDETEGEQRHPFDALQRAAIKKSKTDLLNPEEADDQLADIASVGSPFARASIKS
AKLENSTFFHKRERRMRFYIRRMVKTQAFYWTVLSLVALNTLCVAVVHYSQPDWLSDFLY
YAEFIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVVWAVMKPGTSFGIS
VLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQF
NFDTGTPATNFDTFPAAIMTVFQILTGEDWNMVMYDGIKSQGGVKRGMVFSVYFIVLTLF
GNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAATQKLALQKAKEVAEVSPLSAASMSIA
VKEQQKNQKSSKSVWEQRTSEMRKHNLLASREALYNELDPEERWKVSYARPSRPDIKTHL
DRPLVVDPQENRNNNTNKTRPSDPPLEPRFGPPQAEDFLRKPPRYHDRPRDPGSGRTYPP
PESGVPELRRPHSGSREMEPPVEERSYHEADPERLKAAEPPRRHPHHQAGGKESRGGSPR
DGDREHRRHRGHRRAGEDGGGTDEGPKSERRPRHRPGEGEMPDGERRRRHRHAAQSTYDG
DGKREDKERRHRRRKENQGPVPVHGPHLSTTRPIQQDMGRPEPPVAEDIDNMKNNKLATT
ETSNPHPQSPTKLGNHANCTPSRAPDALGQLPPNSQNVANRWAPDNPSQPSNPRPPKTPE
NSLIVTNPGPQNNPTKTAKKPEYTAVEIPTTFPPPIHNTVVQVNKNANPEPLPKKDEEKK
EEEADDQEENRPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILMVIAMSSIALAA
EDPVQPNAPRNNVTPFLDLVFTGVFTFEMVIKMVDLGLVLHQGAYFRDLWNILDFIVVSG
ALVAFAFTGSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVY
MLFMFIFAVVAVQLFKGKFFYCTDESKEFENDCRGEYLVYEKDEVKAEKREWKKYEFHYD
NVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVN
IFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNKQSFQYRMWQFVV
SPPFEYTIMAMIALNTVVLMMKFYGASDAYENVLKMFNNVFTSLFSLECLLKIMAFGVLN
YFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWT
FVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDDKDDESAITEHNNFRTFFQALMLL
FRSATGEGWQEIMLSCLSGKPCDENSGIMEHECGNEFAYFYFVSFIFLCSFLMLNLFVAV
IMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRLTFTDMYEMLRHMSPPLGLGKKC
PPRVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDAELRKEMMA
IWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQNRTPLMFQ
RMEPPSPGQEGGPGQDALPPPPLDQGGGLGHEGGMKESQSWVTQRAQEMFQKTGTWSPER
ARPDDLPNSRPSSQSVEMREIGKDGYSDSDHYPPMQGHGRAASMPRLPAENQRRKVRPRG
NNLSTIPDVSPMKRSASVLGHPRARGIRLDDYSLERVPPDDAQRHHLRRRDRDRDRAHRA
SDRSLGRYADADAGLGTDLSMTPPSGELPLKERDGERGRPKDRRHHHHHHHHHHRHEDGR
PRDRDRDRRWSRSPSEARDHPPPRQGSSSVSGSPVLSTSGTSTPRRGRRQLPQTPATPRP
HVSYSPVVRKAAPPVPRRHPDPAPERPTAASPRSYRHASSRWQPPDAPPGAHHSYYRGPE
FNETPHGTPRTCRATASPSRHGRRLPNGYYHSQGHGHGPPKARPAGSRHGLHEPYSETDE
DDCC
NT seq
7395 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcatgctgtggcccgcagtgccatgccatcccctcccagctactatgacgca
gtgcatgatgggtgtgggctaccagatgccccttcccatgatgggcggtaccatcagatg
agccctgagcaggagccccctgcgctcaagaggcgcggcggtgtggtggaccaccgggat
gtcatcatggcacatcaagcccacaagattcacagcaccccccaggcccaacggaaggaa
tgggagatggctcggtttggagatgagatgccggcccgctacggggctggaggcgtcggg
ggagctggctccgggggagcagcaggcggtggaggcagccggggtgcagggggtggccgc
cagggcgggccccctggggcacagaggatgtacaagcagtcgatggcccagcgagcccgc
accatggctctctacaaccccatccccgtccggcagaactgcctgacggtcaaccggtcc
ctcttcctcttcagcgaggataacgtggtgaggaaatacgccaaaaagatcaccgaatgg
cctccttttgaatatatgatcttagctaccatcatagccaactgcatcgtcctggctttg
gagcagcacctgcccgatgaagacaaaacccccatgtcggagcggttggatgacacggaa
ccatatttcatcggcatcttttgttttgaggctgggattaagatcattgctctggggttt
gccttccacaaaggctcctacctaagaaacggctggaacgtcatggacttcgtggtcgtt
cttacaggcatactcgcaaaagtcggttctgagttcgacctgcggacgctgagggctgtt
cgtgtgctccggccactcaagctggtctctgggatcccaagtttacaagtggtcctgaag
tccatcatgaaggcgatgatacctctcctccagattggcctccttttgttttttgcaatc
cttatttttgcaatcataggattagaattttatatggggaaatttcacaccacctgcttt
gactcggtgacaggtgagatcaaggaccgggttccgtgtggcatggacgagccagcccgc
acctgccccaatgggacccgttgctccaagtactgggaaggccccaactatgggatcacc
cagtttgacaacatcctcttcgctgtgctgacggtcttccagtgtatcaccatggaaggg
tggaccgacctcctttataatagcaacgatgcctcagggaacacttggaactggctgtac
ttcatccccctcatcatcattggctccttttttatgctgaaccttgtgctgggggtgctg
tccggggaatttgccaaagagagggagcgtgtggagaaccgccgagccttcctcaagctg
agacggcagcagcagattgaacgggagctcaatggctacatggaatggatttccaaagca
gaagaagtgatcctagcagaggacgagacagagggagagcagaggcacccctttgatgct
ctgcagagagctgccatcaagaagagcaagactgacctgctgaaccccgaggaagcagat
gatcagctagccgacattgcctccgtcggttcgcccttcgccagagccagcattaaaagt
gccaagctggagaactccaccttctttcacaaaagggagaggaggatgcgtttctacatc
cgccgcatggtcaaaactcaggccttttactggaccgtcctcagtctagtagcactcaac
accctgtgtgttgctgtagtacactacagccagccagattggctatcagacttcctctac
tatgcagaattcattttcttaggactctttatgtccgaaatgtttataaaaatgtatggg
ctcggaacgcggccttactttcactcctccttcaattgcttcgattgtgccgtcatcatt
ggcagcattttcgaggtggtctgggcggtcatgaagcccggcacgtcgttcgggatcagt
gtgttacgagctctcaggttattgcgtattttcaaagtcaccaagtactgggcttccctg
aggaacctggttgtgtctctcctcaactccatgaagtccatcatcagcttgctcttcctc
ctcttcctcttcatcgtcgtctttgcccttttggggatgcagctttttgggggccagttc
aattttgacactgggactccagccaccaacttcgacaccttcccagcagcaataatgact
gtgtttcagatcctgacgggtgaagactggaacatggtgatgtatgatggcattaaatct
cagggtggcgtgaagcgagggatggtgttctcggtctatttcattgtcctgaccttgttt
ggtaactacaccctgctgaatgtgttcttggctatcgccgtcgataacctggccaatgcg
caggaactcaccaaggatgagcaagaggaggaggaagcagccacgcagaagctggcactg
cagaaagccaaggaggtggccgaagtgagccccttgtctgcagccagtatgtccattgcc
gtgaaagaacagcagaagaaccagaagtcctctaagtcagtgtgggagcagcggacaagt
gagatgcgcaaacacaacttgctggccagccgtgaggccttgtacaatgagctggatcct
gaggaacgctggaaggtgtcctatgcccgcccctcccgccccgacatcaagacccacctg
gaccggccactggtggtggacccccaggagaaccgcaacaacaacaccaacaagacacgg
cccagcgaccctcctttggagccccgctttgggcctccgcaagctgaggacttcctgcgc
aagccaccccgctaccacgaccggccccgggaccctggcagtggtcgcacctacccacca
cctgagtcgggggtaccagagctgcggcggccccacagtgggagccgcgagatggagcca
cctgtcgaggagcggagctatcatgaggccgaccctgagcggctaaaggcagccgagccc
ccccggcggcacccacaccaccaggctggtggcaaggagagccgtggtgggtcaccccga
gatggtgaccgggagcaccggaggcaccgggggcaccgtcgggcaggcgaggatgggggt
ggcactgatgaggggcccaagtctgagaggcgcccacggcaccggcctggggaaggcgag
atgccagatggcgagagacggcggcggcaccgccatgctgcccagtccacatatgatggc
gatggcaagcgggaggacaaggagaggcggcaccggcgtcggaaagagaaccagggccct
gtcccagtgcacggccctcacctgtccaccacgcggcccatccagcaggacatggggcgc
ccagagccaccagtggccgaggacattgataacatgaagaacaacaagctggccaccacg
gagacttccaacccccatccccagagccccaccaagctgggcaaccatgctaactgcacc
cccagccgggcccctgatgccctgggccagctgcctcccaactcccagaatgttgccaac
cgctgggctcctgacaacccaagtcagccctccaacccccggccccccaagactcccgag
aacagtctcatcgtcaccaaccctggcccccagaacaacccaaccaagacagccaagaag
cctgaatacacagctgtggagatccccaccacctttccgccacccatccacaacactgtg
gttcaagtgaacaaaaatgccaaccctgaaccactgcccaagaaggatgaggagaagaaa
gaggaggaggccgatgaccaggaggagaacagacccaagcccatggtgccctacagctcc
atgttcatcctctccaccaccaaccccttccgccgcctgtgccattacattgtgaacctg
cgctacttcgagatgtgcattctcatggtcattgctatgagcagtatcgccctggctgct
gaggaccctgtgcagcccaacgccccccgcaacaacgtgactcccttcttggatctagtc
ttcacgggcgtcttcacctttgagatggtcattaagatggtcgacctggggctggttctc
catcaaggtgcctacttccgggacctgtggaatatcctggacttcatagtagtcagtggt
gcccttgtggcctttgccttcactggcagcaaagggaaggacatcaacaccatcaaatcc
ctccgtgttctccgtgtccttcggcccctcaaaacaattaagcggctgcccaagctcaag
gctgtcttcgactgtgtggtgaactccctgaagaacgtactcaacatcctcatcgtctac
atgctcttcatgttcatcttcgctgtggtggctgtgcagctcttcaagggcaagttcttc
tactgcaccgatgagtccaaggagtttgagaatgactgcagaggcgagtacctggtctac
gagaaagatgaagtgaaggcagagaagcgggagtggaagaagtacgagttccactacgac
aacgtgctgtgggcactccttaccctcttcaccgtctccacaggagaaggctggcctcaa
gtcctcaagcactcagtggatgccacatatgagaaccagggccccagccctggatatcgc
atggagatgtccattttctacgtggtttactttgtggtcttccccttcttctttgtcaac
atttttgtggctttgatcatcatcacattccaggagcagggagacaagatgatggaggaa
tacagcctggagaagaatgagagagcctgcattgactttgccatcagtgccaagcccctg
acacgccacatgccccagaacaagcagagcttccagtaccgcatgtggcaatttgtggta
tccccaccctttgagtacaccatcatggccatgattgccctcaacactgttgtcctcatg
atgaagttctatggagcctcagacgcctacgagaatgtactcaagatgttcaacaatgtc
ttcacttcactcttctccctcgagtgcttgctgaagatcatggctttcggggtgctgaat
tatttccgtgatgcctggaatatctttgattttgtcacagtgctgggtagcatcacagac
atcttagtgacggagttcgggaacaacttcatcaacctgagcttcctgcggctgttccgt
gctgcccgcctcatcaagttgctgcgccagggctacaccatccgcatcctgctctggacc
ttcgtgcagtccttcaaggccctgccctacgtctgcctgctgatcgccatgcttttcttc
atctatgccatcattggcatgcaggtgttcgggaacattggcatcgatgacaaggacgat
gagtcagccatcacggagcacaacaacttccgcaccttcttccaggccctcatgctgctc
ttcaggagtgccacaggcgagggttggcaggagatcatgctatcctgcctgagcggaaag
ccatgtgatgagaactcgggcatcatggagcacgaatgtggcaatgagttcgcctacttc
tactttgtctccttcatcttcctctgctccttcctgatgctgaacctgtttgtagctgtg
atcatggataactttgagtacctgacccgcgactcctccatcctgggtccccaccacctg
gacgagtatgtacgtgtgtgggccgagtatgaccctgccgcctggggccggctgactttc
accgacatgtatgagatgctgagacacatgtccccgcccctggggttagggaagaaatgc
ccaccccgggttgcttataagaggctgctgcggatggacctgccagtggctgatgacaac
acggtgcacttcaactccaccctcatggccctgatccgcacagctctggacatcaagatt
gccaaaggaggtgcagacaagcagcagatggatgcagagctgcgcaaggagatgatggcc
atctggcccaacctgtcccagaagaccctggacctccttgtcaccccccacaaatctaca
gatctgacagtggggaagatctatgcggccatgatgatcatggagtattatcggcagagc
aaagccaagaagctgcaggccatgcgggaggagcagaatcggacaccactgatgttccag
cgcatggagccgccatctcccggccaggaggggggtcctgggcaggatgcactaccaccc
cctcccctcgaccaaggaggaggcttggggcacgagggcggcatgaaggagagccagtct
tgggtgacgcagcgtgcccaggagatgttccagaagacaggcacctggagccctgagcgt
gcccgccccgatgatctgcccaatagccggcccagctcccagtcggtggagatgcgggaa
attggcaaggacggctactcagacagcgatcactacccccccatgcaggggcatggccga
gctgcctccatgccacggctgcctgccgagaaccagcggaggaaggtgcggccccgagga
aataatctcagtactatcccagatgtcagccccatgaagcgttcggcctcagtgctgggg
catccacgggcccggggtatccgcctggatgactactcattggagcgcgtcccccctgat
gacgcacagcgccatcacctgcgccgcagggaccgggaccgggaccgtgcccaccgtgct
tctgaccgctcactgggccgctacgcagatgctgatgcaggcctgggcacggacctgagc
atgacaccgccgtcgggtgaactacccctgaaggagcgtgatggggagcgtggacgcccc
aaggaccggcgacatcaccaccaccatcaccaccatcaccaccggcacgaggatgggcgg
cctcgcgaccgtgaccgcgaccgccgctggtcccgttcccccagtgaggcccgcgaccac
cccccgccccgccagggcagtagttcggtcagtggcagccccgtcctgtccacatcgggg
accagcaccccacgacgggggcgccgccagctgccccagacccctgccacaccccgtcca
cacgtgtcctactcacctgtggtgcggaaagctgcccccccggtgcctcgccgccacccc
gacccagcacccgagagacccacagcggcctcaccgcgcagctatcgccacgccagcagc
cggtggcagccccctgacgccccccctggtgcccatcacagctattaccgtggccccgag
ttcaacgagaccccccatggcacccccaggacttgccgggccacggcctcgccctcacgc
cacggccggcgcctgcccaacggctactatcacagtcaaggtcacggccacggccccccg
aaggcccggccggccgggtcccgccatggcctgcatgaaccctacagcgagactgacgaa
gacgactgctgctag
DBGET
integrated database retrieval system
