Alligator mississippiensis (American alligator): 102565271
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Entry
102565271 CDS
T03087
Symbol
GRIN2A
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04020
Calcium signaling pathway
amj04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102565271 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102565271 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102565271 (GRIN2A)
Ion channels [BR:
amj04040
]
Ligand-gated channels
Glutamate (ionotropic)
102565271 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
102565271
NCBI-ProteinID:
XP_014466306
LinkDB
All DBs
Position
Un
AA seq
1424 aa
AA seq
DB search
MGKIGYALLVLQALLVQLDLVRGAEKSYPILNIAVILGRTKYITERDIRALWTREMSADL
AIDVNVVTLLVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAIAQILDFISSQTFIP
ILGIHGGSSMIMADKDTMSTFFQFGASIQQEAIVMLKIMQEYDWHVFSLVTSTFPGYRDF
ISIIKTTVENSFVGWDMQNVIVLDTAFGDAKTQIQLKKIHSSVILLYCSKDEAVYILDEA
RSLGLTGYDFFWIVPSLVSGNTEITPKEFPSGLISVSYDEWDYSLEARVRDGLGIIATAA
STMLEKYSFIPEAKTSCYGQLEKNERPSHTLHKFMINVTWEGKDLSFTEDGYQAQPKLVV
IVLNKDRAWEKVGKWENKTLSLKYSVWPRFSSFIDSDPDDNHLSIVTLEEAPFVVVEDVD
PLTESCVKNTVPCHKFVKINNSTNEGMNVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNG
KHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGT
VSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAKGKAPHGPSFTIGK
AVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVT
GLSDKKFQRPYDYSPPFRFGTVPNGSTERNIRNNYPDMHLYMTKYNQKGVEDALVSLKTG
KLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFV
GDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYW
KLRFCFTGVCTDRPGLLFSISRGIYSCIHGVHTEEKKKSPDFTLTNSQTNMLKLLRTAKN
MTSINPSRINSPKRTADFIQRGSLIMDMVMDKGNQIFSDNRSFQPKDNFLGDNMSELQTF
AGNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVTAEAKVNSRPRQLWRKSVESLRQESL
RQNQGSQRENGSEENRQLSVKSQRYLPEEIVHSDVSDTSSRATCHMEPENNNKHHKTKDN
FKKRSVVSKYPKDCSEVELTYLKTKQSAPRDKIYTIDGDKEPGFHLDPPEYIENIVLPET
IEFPDVYQDHNDNYRKAEQVNRTPLHNEGSLPDNDQYKLYSKHYSLKDKNTSVVDVNERY
RQNSTHCRSCLSNLPSYTGHFLSRSPYKCDACLRIGNLYDIDEDQMLQETTNSAHPEEMY
ERDWVQNNSIQYQKKNKLRISRQHSFDNILDKPREIDVGRPARSISLKEKERFLEGSPYA
NMFNLPQNKLLSHKASLFTHALEDSKRSKSLYPDHSADNPFLHSYRDDQHLTLRRSPSDL
YKQSLPSQARNDNYLRSSIKSTASYCSRDGRVHNDIPPSSVSMS
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaattggctatgctctcctggtactccaagctctactggtgcagttggatctt
gttcgcggagcagagaaaagttatcccatcctgaacattgcagtgattctgggaaggacg
aagtatatcacggagagagacatccgagctctctggaccagggaaatgtcagcagacctg
gccattgatgtcaatgtagtgacccttctggtgaaccagactgaccctaaaagcattata
acacatgtttgtgacttgatgtcaggcaccaagatccatggggtggtttttggagatgat
actgatcaggaggcgatagcccagattttggattttatttcatctcagacctttattccg
attctcggaattcatggtgggtcctccatgataatggcagacaaggatacgatgtccacg
ttcttccagtttggggcttctatccagcaggaagccattgtcatgctgaaaatcatgcag
gagtatgactggcatgtcttttctctggtgaccagcacttttcctggataccgagacttt
ataagtatcatcaagactacagtggaaaacagttttgtgggctgggacatgcagaatgtg
atcgtacttgatactgcatttggagatgctaagacacagattcagctaaagaaaattcat
tcatctgttatcctgctgtattgttctaaggatgaagctgtttacatcctggatgaggca
cgttccctgggccttacgggctatgattttttctggatagttcccagtctggttagtggg
aacacagaaatcactcccaaggaatttccttcagggcttatttcggtgtcatatgatgaa
tgggactacagtttagaagctcgagtacgggatggtcttgggattatcgccacagctgca
tcaactatgttggaaaaatactccttcatccctgaagcaaaaaccagctgctatgggcaa
ctagagaagaatgaacgtccatctcacactctacacaagtttatgataaatgtgacttgg
gaaggtaaagatttgtccttcacagaagatggctaccaggcacagcctaagctagtggtg
atagtactgaacaaagatcgagcatgggaaaaggtgggcaagtgggagaacaagacactg
agcctgaagtattccgtatggccaagatttagttcttttatagacagcgatccagatgac
aaccacttgagtattgttaccttggaggaggccccctttgttgtagttgaagatgtggat
cctttgacagaatcttgtgtgaaaaacacggtgccatgccacaaatttgtcaaaattaac
aactcaactaatgaaggaatgaatgtaaagaaatgctgcaagggattctgcattgacatt
ctgaagaagttatctaaaactgtgaagttcacatatgacctgtaccttgtgaccaatggg
aagcatggcaaaaaagtcaataacgtatggaatggaatgattggtgaagtggtctatcaa
agggcagttatggctgtaggttctctcactattaatgaagaacgttcagaagtggttgac
ttttcagtgccatttgttgagactggaattagtgtcatggtttcacggagtaatggcacg
gtttctccatctgcatttctagagccttttagtgcttctgtctgggtgatgatgtttgtg
atgcttctcattgtgtccgccatggctgtctttatatttgagtactttagccctgtagga
tataacaggaacttagcaaaggggaaagctccccacggaccatcttttaccattgggaaa
gccgtgtggttgctctggggtctggtatttaataactctgtgcctgttcaaaaccccaaa
gggacaaccagtaaaatcatggtgtcagtttgggcattcttcgctgtcatctttctggct
agttacactgccaacttggctgcatttatgattcaggaggaatttgttgaccaggtgact
gggctgagtgataaaaagtttcaaaggccatatgattattcacccccgtttcgatttgga
actgttccaaatgggagcacagagagaaatatcagaaacaattacccagatatgcacctc
tatatgacaaagtacaatcagaaaggagttgaagatgccttggtcagcctgaaaactggg
aagttggatgctttcatctatgatgctgcagttctgaattacaaggctggaagagatgag
ggttgcaaacttgtcacaataggcagcggatacatctttgctactacaggctatggaata
gcacttcagaaagggtcaccttggaagagacagattgacttagccctccttcagtttgtt
ggtgacggagagatggaggaattggaaacactgtggctgacaggtatttgtcacaatgag
aagaatgaagtcatgagcagccagctggatattgacaacatggcaggcgtattttacatg
cttgcagcagccatggccctcagtctaataacctttgtttgggaacatttgttttactgg
aaactcagattctgcttcactggggtctgcacagataggccaggattgttgttctccatc
agcaggggtatttatagctgtattcatggagtacacactgaggaaaaaaagaagtcacct
gactttactttgaccaattcccaaaccaatatgttaaaactattacgaacagctaaaaac
atgacaagcattaatccttcaagaattaactcccccaaaagaacagctgattttattcaa
aggggttccttaattatggatatggtcatggataaggggaaccagatattttctgacaat
agatcttttcagccaaaggacaattttcttggtgacaatatgagtgaactgcagacattt
gctggcaaccgtcataaagacaatcttaataactatgtatttcaaggtcagcatcctctc
acgctgaatgaatctaatccaaatacagtagaggttgctgttacagcagaagcaaaagta
aactccagacccaggcagctttggagaaaatctgtcgaatctttacgtcaagaatcccta
cgtcagaaccaaggttcgcagagagaaaatggttcagaagaaaacagacagctttctgtg
aagagccaaagataccttccggaagagattgtccattcagatgtttcagatacgtcaagc
cgagccacttgccatatggaacctgaaaataataacaaacaccacaaaaccaaggacaat
tttaaaaaaagatctgtggtgtcaaaatatcccaaggactgtagtgaagtggaactgaca
tatctaaaaacaaaacaaagtgctccccgggataaaatttacaccattgatggtgataag
gaaccaggattccatctggatccaccagagtatattgaaaatattgttcttccagagact
attgaatttcctgatgtttatcaagaccataatgacaactacaggaaagcagaacaagtt
aacaggactcccttacataatgaaggcagtcttccagataatgaccagtacaaactttat
tcaaagcactatagcttaaaagataaaaatacttctgtagttgatgtgaatgagagatac
aggcagaattccacccactgcaggagctgtctttctaatctgcccagttacacgggccac
tttttaagccggtctccctataaatgtgatgcttgcttgaggattgggaacctctatgac
attgatgaagatcaaatgttgcaggaaacaaccaactcagcgcaccctgaagaaatgtat
gaacgtgactgggtccaaaataattctatccagtaccagaaaaaaaataagttgagaatc
agcaggcaacattcttttgacaacatccttgataagccccgagaaattgatgttggaaga
cctgctcgaagcataagcttgaaagagaaagagaggtttctagaaggcagcccgtatgca
aatatgtttaatctcccccaaaacaaactgttgagccacaaagcctcacttttcacgcat
gctctggaggacagtaagcggagcaagtccttgtatcctgatcattctgcagataaccct
tttctgcactcttatcgtgatgatcagcacttaactctaagacgaagtccatctgatctc
tataaacaatcactaccatcacaagcaagaaatgataattatttaaggtcatccataaag
tccacagcttcgtactgttccagagatggtcgggtccataatgacataccaccttcttca
gtgagcatgtcctaa
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