Alligator mississippiensis (American alligator): 102567277
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Entry
102567277 CDS
T03087
Symbol
RXRA
Name
(RefSeq) retinoid X receptor alpha
KO
K08524
retinoid X receptor alpha
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03320
PPAR signaling pathway
amj04148
Efferocytosis
amj04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102567277 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
102567277 (RXRA)
03320 PPAR signaling pathway
102567277 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102567277 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amj03310
]
102567277 (RXRA)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
102567277 (RXRA)
Nuclear receptors [BR:
amj03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
102567277 (RXRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
DUF6021
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
102567277
NCBI-ProteinID:
NP_001304072
UniProt:
A0A0N7CKG8
LinkDB
All DBs
Position
Un
AA seq
439 aa
AA seq
DB search
MAAPSLHPSIGPGIGSPLGSAGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPSTP
NLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGTMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccttccctccatccatccatcggaccggggatcggctccccgctgggctca
gcgggccagctccactcccccattagcaccctcagctcccccatcaatggcatgggccct
cctttctccgtcatcagctcccccatgggacctcactctatgtcagtcccctccaccccc
aacctggggtttggaaccggcagcccacagctcaattctccgatgaaccctgtcagcagc
tcagaagacattaaaccgcccttggggctcaatggggtccttaaagtgccagcacacccc
tcaggaaccatggcctccttcaccaagcacatatgtgccatctgcggggaccgatcttca
ggtaaacattacggggtgtacagctgcgagggctgcaaaggtttcttcaagcgcacagtg
cggaaagacctcacctacacctgccgtgacaacaaggactgcctgatcgacaagcgccag
cgcaaccgctgccagtactgccgctatcagaagtgtctggccatgggcatgaagcgagaa
gctgtgcaagaggagaggcagagggggaaagatcgaaatgagaacgaggtggagtcgaca
agcagcgccaacgaggacatgcccgtggagaagatcttggaagccgaactggcggtggag
ccaaagacagagacgtacatcgaagcaaacatgggcttgacccccagctcgcccaacgac
ccggtaaccaacatatgccaagcagcggacaaacagctcttcaccttggtggaatgggca
aagagaatcccccacttctcggagctgccgctggatgaccaggtcattttgctcagagca
ggctggaacgaactgctcatcgcctccttctcccaccgttcgatagctgtgaaagacggg
atcctcctagctaccggcctccacgtccatcggaacagcgcgcacagcgcaggggtcggt
gccatctttgacagagtactgacagaactcgtgtcaaaaatgcgggacatgcagatggac
aagacagagctgggctgcctgcgggccatcgttctcttcaacccagattcaaaaggtctc
tccaaccccgccgaggtggaggccttgcgtgagaaggtatatgcgtcgctagaggcatac
tgcaaacacaaataccctgaccagcctggaaggtttgcaaagctcttgctccgtctccct
gccctccgatccatcggcctgaaatgcctggagcacctgttcttcttcaagctaatagga
gatacacccatcgacaccttcttgatggaaatgctggaagcgccccaccaaatgacttaa
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