Alligator mississippiensis (American alligator): 102572029
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Entry
102572029 CDS
T03087
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102572029 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102572029 (IRF6)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102572029 (IRF6)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102572029 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
102572029
NCBI-ProteinID:
XP_006268141
LinkDB
All DBs
Position
Un
AA seq
460 aa
AA seq
DB search
MALHPRRVRLKPWLVAQVDSGLYPGLVWLNREVKRFQIPWKHATRHSPQHEEENTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPIKIYEVCDIPQSQ
GSIINPGSTGSAPWDEKDNDLDDEEEEELNPSQHIPIQDTFPFLNINDSPMAPASVESCS
TEAAWSKNEPVDMEMPPSTLQHDFFSSPELWISSLPMTDLEIKFEYRGKETGPTSTVSNP
QGCRLFYGELGPMPDQEELFGPISLEQVKFPGTEQITNEKQKIFTSRLLDVMDRGLILEV
SGHAIYAIRLCQCKVYWSGPCAPSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQMEKQ
PPFEIYFCFGEEWPDGKPRDRKLIVVQVIPIVARMIYEMFSGDFTRSFDSGSVRLQISTP
DIKDNIVAHLKQLYRLLQTHQDTWPMPAPNMQITQPLPAQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcacccacggagagttcgtttgaaaccctggctggtagcgcaggtagacagt
ggtctgtacccaggccttgtctggctaaatcgggaagtaaagcgatttcagatcccctgg
aagcatgcaacacgacacagtcctcagcacgaagaggagaacaccatctttaaggcatgg
gccgtggaaacgggaaagtatcaggaaggagtcgatgagccagaccctgcaaaatggaaa
gcccagctccgatgtgctctcaacaaaagccgggaattcaacttgatgtacgatggaacc
aaagaggtgcccatgaaccctattaaaatttacgaagtgtgcgatatcccgcagtcccag
ggatcaatcattaatccagggtccactggctctgctccctgggatgagaaagataatgac
cttgatgatgaggaagaagaagaattaaatccatctcagcatatccccatacaggacact
tttccgtttcttaatattaatgattccccgatggctccagccagtgtagaaagttgcagc
actgaagcggcgtggtccaagaatgaaccggtagatatggagatgcccccaagtactctg
cagcatgacttcttcagctcccctgagctctggattagctctctcccaatgacagatcta
gaaatcaagtttgaatatcgaggaaaagagactgggccaacctcaactgtcagcaatccc
cagggatgcaggctgttctacggagaattgggtcctatgccagaccaggaagagctgttt
ggacctattagtctggagcaagtaaagtttccaggaacagaacagatcaccaatgaaaag
caaaagattttcacaagtcggctgctagatgtcatggacaggggactgattctggaggtc
agtggccatgccatctatgccatccggctatgtcagtgcaaggtgtactggtctggacca
tgtgccccttcgtccaccacaccaaacctgattgagaggcaaaagaaagtcaaactcttc
tgtctggaaacatttctaagtgagctgattgctcatcagaaaggacagatggaaaaacag
cccccctttgagatctacttctgttttggggaagaatggccggatggaaaacctagagat
agaaagctgattgtggtgcaggtcattccaattgtagctcggatgatttatgaaatgttt
tcgggcgacttcacacgttccttcgacagtggcagcgtgaggcttcagatctccacgccg
gatattaaggacaacatcgttgcccatttgaaacagctgtaccgcctcctgcagacccac
caagatacctggccaatgccggccccaaatatgcagattactcaaccgctcccagcacaa
tga
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