Alligator mississippiensis (American alligator): 102572993
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Entry
102572993 CDS
T03087
Symbol
CHRNA4
Name
(RefSeq) cholinergic receptor nicotinic alpha 4 subunit
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102572993 (CHRNA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102572993 (CHRNA4)
Ion channels [BR:
amj04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
102572993 (CHRNA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
102572993
NCBI-ProteinID:
XP_019339959
LinkDB
All DBs
Position
Un
AA seq
628 aa
AA seq
DB search
MGESPSALGCVPLSMVSLSRAFPAVCGHVETRAHAEERLLKKLFSGYNKWSRPVANISDV
VLVRFGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWDPLEYENVTSIRIPSELIWRP
DIVLYNNADGDFAVTHLTKAHLFYDGRIKWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGS
WTYDKAKIDLVSMHSHVDQLDYWESGEWVIINAVGNYNIKKYECCTEIYPDITYSFIIRR
LPLFYTINLIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSL
VIPLIGEYLLFTMIFVTLSIIITVFVLNVHHRSPRTHTMPDWVRRIFLDVVPRLLFMKRP
SAVKDNCKKLIESMHKIANAPRIWSETEAEPNFVTSSSNSPQSNEQSPTASLCAHLEEPT
KPPSVCKSPSGQYSVLHQEPVQVSCSSPQPPGHPLSDTQSPSIAKSRSLSVQQMYSPNKD
EEGSIRCRSRSIQYCYLQEESSQTNGQSSGSPASQRCRLNEDRSPRKPSPCKCKCKKKEA
AGTSGQGTKAHSTKEQPLLLMSPALKLAVEGVHYIADHLRAEDADFSVKEDWKYVAMVID
RIFLWMFIIVCLLGTVGLFLPPWLAGMI
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggagagtctccctctgccctgggctgtgtccctctgagcatggtgtctctgtctcgt
gctttccctgcagtgtgcggtcacgtggaaacccgagcccacgctgaggaaaggctcctg
aagaaactcttctcgggctataacaagtggtcccgccctgtagccaacatttcggacgtg
gtgctggtccgctttggattgtccatcgcacagctcattgatgttgatgagaagaatcaa
atgatgaccacgaacgtgtgggtgaaacaggagtggcacgactacaagctgcgctgggat
cccctggaatatgaaaacgtgacatcaatccggatcccctctgagctcatctggaggccg
gacatcgtcctgtacaacaatgcggatggagactttgccgtcactcacctgaccaaagcc
cacctgttttacgatggcagaatcaaatggacacctcctgccatctacaaaagctcctgc
agcatcgatgtcaccttctttccctttgaccagcaaaactgcaccatgaagttcggctcc
tggacctatgacaaagccaagatagacttagtgagcatgcacagtcacgtggaccaactg
gactactgggagagtggggaatgggtcatcattaatgccgtgggcaactacaacatcaag
aaatacgagtgttgcacagagatctaccctgatataacctactcctttattatcaggagg
ctgcctttgttctacaccatcaacctgatcatcccttgcctcctcatctcctgcttgact
gtcttggtcttctacttgccttcagagtgcggtgagaagatcacgctttgcatctccgtg
ctgctgtcgttgactgtctttctgctgctcatcactgagatcatcccctccacctccctg
gtcattcccctgatcggagagtatctgctcttcaccatgatatttgtcaccttgtccatc
atcatcactgtctttgtactgaacgtgcaccaccgctcgccacgcacccacaccatgcca
gactgggtgagaaggatcttcctcgatgtggtcccgcgcctcctcttcatgaagcggccc
tcagcagtgaaggacaattgcaagaagctcatcgagtccatgcacaaaatagccaacgct
ccaagaatttggtccgagactgaagcagagcccaactttgtgacctcctcttcaaacagc
cctcagagcaatgagcaatcccccacagcctccctctgtgcccatctcgaggagccaacc
aagcccccatcggtctgcaagtcaccttcaggccagtactctgtgctgcaccaggagcca
gtgcaggtgagctgctcttccccgcagccccccggccatcccctgagcgacacgcaatct
ccctccatcgccaaaagcaggtcattaagtgttcagcagatgtacagccccaataaagat
gaggaagggagcatccggtgtagatccaggagcatccagtattgctacctgcaggaggag
tcatcccagaccaacggccagtccagcggctctccggcctctcagcgttgccgcctgaat
gaagacaggtccccgcgcaagccctctccttgcaagtgcaagtgcaaaaagaaggaagcc
gccggcacgtcagggcaaggcaccaaagctcacagcaccaaagagcagccccttctgctg
atgtcccctgccctgaagctggcggtggagggggtccactatatcgcagaccacttgaga
gcagaagacgcagatttctcagtgaaggaggactggaagtacgttgccatggtcattgac
agaatcttcctctggatgttcatcatcgtttgcttgctgggaactgtcggtctcttcctt
ccaccttggctagcaggcatgatctaa
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