Alligator mississippiensis (American alligator): 102573642
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Entry
102573642 CDS
T03087
Symbol
CRNKL1
Name
(RefSeq) crooked neck pre-mRNA splicing factor 1
KO
K12869
crooked neck
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102573642 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amj03041
]
102573642 (CRNKL1)
03036 Chromosome and associated proteins [BR:
amj03036
]
102573642 (CRNKL1)
Spliceosome [BR:
amj03041
]
Complex B
Other components
Prp19-related factors
102573642 (CRNKL1)
Complex C
102573642 (CRNKL1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
102573642 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
U3_assoc_6
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
102573642
NCBI-ProteinID:
XP_006265956
UniProt:
A0A151ND75
LinkDB
All DBs
Position
Un
AA seq
693 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELND
YKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNVTLWLKY
AEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQPE
EQAWHSYINFELRYKEVDRARSIYEQFVIVHPDVKNWIKYARFEEKHSYFAHARKVYERA
VEFFGEEHMDEHLYVAFAKFEENQKEFERVRVIYRYALDRIPKQEAQQLFKNYTIFEKKF
GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADADTVREVYERAIANVP
PIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQACLELIPHKKFTFAKMWLLYAQF
EIRQKNLPFARKALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFTPENCTS
WIKFAELETILGDTDRARAIYELAIGQPRLDMPEVLWKSYIDFEIEQEEYEKTRNLYRRL
LQRTQHVKVWISFAQFELSARKDELSAGKDDSLSRCRQVYEEANKAMRNCEEKEERLMLL
ESWKSFEEECGTDTTKERVDKLMPEKVKKRRKIQAEDGSDAGWEEYYDYIFPEDAANQPN
LKLLAMAKLWKKQQQETEAEEVDPDKDIDESSS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacggcggccggcaagcagcggatccccaaagtggcgaaggtgaaaaataaa
gccccagcggaagtacagatcacagcagaacagctcttgagagaagcgaaagagagagaa
cttgagcttcttccgccccctccccagcagaagatcactgatgaggaagagctaaatgat
tacaagcttcggaaaaggaagacttttgaagataacataagaaaaaacagaactgttatc
agtaactggataaagtacgcacaatgggaggaaagcctcaaagaaatacaaagagctcgt
tccatctacgagcgtgctttggacgtggactacagaaatgtcactttgtggctgaagtat
gcagaaatggaaatgaagaaccgccaggttaatcatgcccgcaacatctgggatcgagcc
atcaccactctgcccagagtcaaccagttctggtataagtatacgtacatggaagagatg
ctgggaaatattgctggagcacgtcaggtgtttgagcgctggatggagtggcagccagag
gaacaagcttggcattcctatattaactttgagctgagatacaaggaggtggacagggca
cgctccatttatgagcagtttgtcattgtgcatcccgatgttaagaactggatcaagtat
gcccgctttgaagagaagcacagctactttgcccatgcaagaaaagtatatgagagagca
gtggagttctttggagaagagcacatggatgagcatttgtatgtggcctttgcaaaattt
gaggagaaccagaaggaatttgagagagtgagggtgatctacagatatgccctggataga
attcccaaacaggaggcccaacaactcttcaagaactacaccatctttgagaagaagttt
ggggacagaaggggcattgaagacatcattgtcagcaaaagaagattccagtatgaagag
gaagtaaaggctaatccacacaactatgatgcgtggtttgattacttgcggctggttgaa
agtgatgcggatgctgatactgtgcgagaagtttacgagagagccattgccaatgttcca
ccaatccaagagaagagacactggaagagatacatatatctctggatcaactatgcattg
tatgaagaactggaggcaaaggacccagaacgaactagacaagtatatcaagcatgtctg
gagctcattccacacaaaaagtttacatttgccaaaatgtggcttctctatgcacagttc
gaaataaggcagaagaatcttccatttgccagaaaagctttgggaacttccataggcaaa
tgcccaaagaacaagctatttaaaggttatattgagctggagctacaactgcgagagttt
gatcgctgccggaagctgtacgaaaaattcctggagtttacacctgaaaactgcacgtca
tggattaaatttgctgagttagagacaatacttggtgacaccgacagagcccgagcaata
tacgagttggcgattggtcaaccccggctagacatgccagaggttctttggaaatcctat
attgactttgaaatagagcaggaagagtatgagaaaacaaggaacctttatcgaagatta
ctgcagcggacacagcatgtcaaggtatggatcagttttgcccagtttgagctgtctgca
agaaaggatgagctgtctgcaggaaaggatgacagcctgtcaagatgcagacaggtctat
gaagaggctaataaggcaatgcggaactgtgaagagaaggaagagaggcttatgctcttg
gaatcctggaaaagctttgaagaggagtgtggaacagataccactaaggagagagtagat
aaactgatgccagaaaaagtgaagaagagaagaaaaattcaggctgaagatgggtctgat
gctggctgggaagagtactatgattacatctttccagaagatgctgccaaccagcccaac
ctcaagttgcttgctatggctaaactttggaagaagcagcaacaagaaaccgaagctgaa
gaggtagatccagacaaagacattgatgaaagcagttcctaa
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