Alligator mississippiensis (American alligator): 102574061
Help
Entry
102574061 CDS
T03087
Symbol
XPC
Name
(RefSeq) XPC complex subunit, DNA damage recognition and repair factor
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102574061 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amj03400
]
102574061 (XPC)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102574061 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
102574061
NCBI-ProteinID:
XP_014461113
LinkDB
All DBs
Position
Un
AA seq
950 aa
AA seq
DB search
MGRKRRGVPAREAASKRPKPPRGSDDDFEEEKPILKRSVSKALSGKKKKKEDGDTRVYSP
ATRATSQKESKSRGKGKNNKAIKNEGNPKEEEMCSGLPSPSGNGKSLKRESTVKKEMDEN
NDGSNDDESEDEWEDVEELQETVPDKSGEAVGLSALVLSGKPVEIEIETPQQAKQRERRE
KRKTEFETYLRRMMKRFNKEVHEDTHKVHLLCLLANGFYRTRICSQPDLQAIGLSIIPNH
FTKVPAGRVDVLYLSNLVKWFVGTFTINTELSVEDGENMQCILERRFAIYAARDNEEMIH
IFLIILRALQLLCRLVLSLQPISLKQVAGKGKSSSKRPSVSGMTKEQEGSARNPKKGSGP
RAKQKEALLDNAGADKKPKKSDIPGIKRASKSKMAKHVQEQKESSAEEGSPGEKEEVLRT
KNNRRRSVASKVSYKEESGSGGDSDSEFEASEEESSVSDEDFEIVPRKQRRSSGPQKPGV
TVKSCRKAGPLESKLPKNSGEAEHALAKKASLGSSNSPKKRNKIISTDEDDMEPEMVKVT
STDQWLEVFVEREDKWVCVDCVHGTVNQPQLCFRYATKPVSYIVGIDNDGCVKDITQRYD
PAWMTLTRKYRVDPEWWEETLQPYKSPFVERDEKEEMEFQVKLQDQPLPTAIGEYKNHPL
YALKRHLLKYEALYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRIGEVPYKM
VKGYSNQARKARLAEPANRDKDDLALFGLWQTEEYQPPVAVDGKVPRNEYGNVYLFLPRM
LPVGCVQLKLPNLNRVARKLGIDCVQAITGFDFHSGYSHPVTDGYIVCEEYKEVLVAAWE
NEQAEMERKEKEKREKRALGNWKLMVKGLLIRERLKQRYCNKSETSRMEKGAGFSSDEEE
GPSSETPAEDVAAFWPLNRQVEKQFEEKKVRKSKREKKGEAAHLFPFEKL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaagcgccgcggggtcccggcgcgggaggccgccagcaagaggcctaagccc
ccgcgcgggtcggacgatgactttgaagaggaaaagcctattttgaagaggagtgtctca
aaggccctcagtggaaagaagaagaagaaagaagatggtgacactagagtttacagtcca
gcaactagagctacaagccaaaaagaatcaaagtcaagaggaaaggggaaaaataacaaa
gctataaaaaatgaaggaaatcctaaagaggaggaaatgtgcagtggtttaccaagcccc
tctgggaacgggaagagtttgaagagagaatccactgttaaaaaagagatggatgaaaac
aatgatggcagcaatgatgatgaaagtgaggatgaatgggaggatgtggaagaactccaa
gagacagttccagataaatcaggagaagctgttggtctttctgcactggtactgtctggc
aaaccagttgaaatagagattgaaactccacagcaagcaaaacaaagagagcgaagagag
aagaggaagactgaatttgagacctatctgcggagaatgatgaaacgtttcaacaaggag
gttcacgaggatacgcacaaggttcatctcctgtgcttgctagccaatggtttctataga
accagaatctgcagccagcctgatcttcaagctattggcctttccatcattcctaaccac
tttaccaaagtacctgctggccgggtagatgttctctatctctccaacttggtgaaatgg
tttgttggaaccttcactatcaacactgagctctctgttgaagatggggagaacatgcag
tgcatcttagaaaggcgctttgccatctatgccgcacgagataatgaagagatgattcat
atatttttaattattctccgagccttacagctgctctgccgacttgtgctgtctctccag
cccatttctctgaagcaggtggcaggaaaggggaagagctcctctaagaggccctctgta
agtggcatgacaaaagagcaggagggctctgctagaaatcctaaaaaaggctctggccca
agagccaagcaaaaggaggcacttttagacaatgcaggagcagataagaaacccaagaaa
tcggacatccctggcattaaaagggcgagtaagtcaaaaatggctaagcatgtccaggaa
cagaaggaatcaagtgctgaggaaggcagcccaggagaaaaagaagaagtgctaaggacc
aaaaataatcgccgaagaagtgtagcttcaaaagtgtcttacaaagaggagagtggaagt
ggtggggacagtgattcagagtttgaggcttcagaggaagagagtagtgtctccgatgag
gattttgaaattgttcctagaaaacagaggaggtcatcagggccccagaaaccaggggtc
acagtcaaaagctgcaggaaagctgggcctttagaatcaaagctacccaagaattcaggt
gaagctgagcatgcattggcaaaaaaggcttccttgggctcttctaattcacccaagaaa
aggaacaaaataatttctactgatgaggatgatatggagccggagatggtgaaagtgaca
agcacagaccaatggcttgaagtttttgtggagcgggaagacaagtgggtctgtgtggac
tgtgttcatggcactgtcaatcagccccagctctgcttcagatatgccacaaagccagtg
tcctacattgtggggattgacaatgatgggtgtgtaaaggacatcacacaaaggtatgac
cctgcatggatgaccttgacgaggaagtatcgcgtggaccctgagtggtgggaagaaact
ttgcagccatataagagcccctttgtggaaagagacgagaaagaagaaatggagtttcaa
gttaagcttcaagatcagcccctgccgacagccattggagagtacaaaaatcaccctctt
tacgcactaaagaggcatcttctgaaatacgaggccctctatcctgagacagctgctatt
ttaggctactgcagaggagaagctgtgtattccagggactgtgtgcacacactgcactca
agagacacctggctaaagcaagcgcgagtagtgaggattggagaagtgccctacaagatg
gtgaaaggatattccaaccaggcgaggaaggcacgattggcagagcccgccaaccgagat
aaagacgacttggctctgtttggcttatggcagacagaggagtaccagcctcctgtggcc
gtggatggaaaggtgccccggaatgaatatggcaacgtttacctcttcctgccccgtatg
ttaccagtaggctgtgtgcagctaaagcttcctaacttgaatagagtggcacggaaactg
ggcatcgactgtgttcaagccatcactggatttgattttcatagcggctattcacatccg
gtcactgatggctacatagtctgtgaagaatacaaagaggtgcttgttgcagcctgggag
aatgaacaagcggagatggaaaggaaggagaaggagaaacgagagaagagagcgctgggg
aactggaaactgatggtgaaaggacttctcataagggagagattgaagcaacgctactgc
aataagagcgagacctctaggatggaaaaaggagctggattttcttctgatgaagaggaa
gggccaagttcagagactccagcagaggatgtggctgctttttggcctctaaatcgacaa
gtggagaaacagtttgaagagaagaaagtcagaaagagcaagcgggaaaagaaaggagaa
gcggcacatttgtttccctttgagaagttatga
DBGET
integrated database retrieval system
