Alligator mississippiensis (American alligator): 102575160
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Entry
102575160 CDS
T03087
Symbol
FAM188A
Name
(RefSeq) family with sequence similarity 188 member A
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102575160 (FAM188A)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102575160 (FAM188A)
Ubiquitin system [BR:
amj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
102575160 (FAM188A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
102575160
NCBI-ProteinID:
XP_006271306
UniProt:
A0A151MPZ4
LinkDB
All DBs
Position
Un
AA seq
445 aa
AA seq
DB search
MAELSAELVHLVWGKSAGPRGLADTIFCRWAQGFVFSESESTALEQFEGGPCAVIAPVQA
FLLKRLFASEKSTWRECQEEEQKNLLSHTLCDILEMVCSDNSESYSLATWIRGKTTEETA
SISESPAESSHQEEQPSALAVEELGFERFHALIHKQAFRSFPELKDAVWDQYSMWTNRFG
VLLFLYSVILTKGIENIKNEIEDSTEPLIDPVYGHGSQSLINLLLTGHAVSNVWDGDREC
SGMKLLGIHKQATVGFLTVMESLRYCKVGSYLKSPKFPIWILGSETHLTVFFAKDMALVA
PEAPSEQARRVFQTYDPEDNGFISDTLLEDVMKALDLVSDPEYVNIMKTKLDPEGLGIIL
LGPFLQEFFPEQDSRVPESFTVYHYNGLKQSNYNEKVMYVEGTAVIMGFEEPMLQTDDTP
VKRCLQTKWPYIELLWTTDRSPSLN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgagcgcggagcttgtgcacctggtgtggggcaagagcgcggggccccgc
ggcctcgccgacaccatcttctgccgctgggcgcaaggatttgtatttagtgaatctgaa
tcaacagcattagaacaatttgaaggtggcccttgtgcagtgattgcaccagttcaggca
ttccttttgaagagactttttgccagtgagaagtctacttggagagagtgtcaagaggaa
gaacagaagaacctcctctcacatacattatgtgacattttggaaatggtttgctctgat
aattcagaatcatactctttggcaacatggataagaggcaaaacaaccgaagaaactgct
agtatttctgagagtcctgcagagtcaagtcatcaagaggagcaaccttctgccttggct
gtcgaagagcttggctttgagcgatttcatgcattaattcacaagcaagcgttcagaagc
tttccagaactcaaggatgcagtttgggatcagtattcaatgtggacaaacagatttgga
gtattgctgtttctgtattctgtgatattgaccaagggtattgaaaacataaaaaacgaa
attgaagactcaacagaaccattaatagatcctgtttatggccatggaagccaaagctta
attaatctcttgctgacgggacatgcagtctctaatgtgtgggatggagatagagagtgc
tcaggaatgaaacttcttggcatacataaacaggcaactgtaggctttttgaccgtaatg
gaatctctgagatattgtaaggttggctcctacttgaaatctccaaagttccctatttgg
atacttggcagtgaaacacacctcacagtcttttttgccaaggatatggcccttgttgcg
cctgaagctccttcagaacaagccagaagagtttttcaaacatatgatcctgaagataat
ggatttatatctgacacacttctagaggatgtaatgaaggctttagatcttgtatcagat
cctgagtatgtaaacattatgaagaccaagttagacccagaaggactaggaattatatta
ttgggtccctttctgcaagaatttttccctgagcaggactccagggttccagagtcattc
actgtttatcactacaatggattgaagcaatctaattataatgaaaaggtcatgtatgta
gaaggaacagcagttattatgggctttgaagagccaatgctacagactgacgacactcca
gtgaaacgctgtttgcaaaccaagtggccatatatagagttactgtggactacagatcga
tctccttcattaaactga
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