KEGG   Ailuropoda melanoleuca (giant panda): 100464124
Entry
100464124         CDS       T01329                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100464124 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aml03041]
    100464124 (SMNDC1)
Spliceosome [BR:aml03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100464124 (SMNDC1)
 Complex B
    100464124 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100464124 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 100464124
NCBI-ProteinID: XP_002930844
Ensembl: ENSAMEG00000005251
UniProt: D2I6J0
LinkDB
Position
6:complement(110169027..110180626)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcagctggcaagctacaaagctcaactccagcaagttgaa
gctgcgttgtctggaaacggagaaaatgaagatttgctaaaattaaagaaagatttacaa
gaagttatagaactaaccaaagaccttctatcaactcaaccttctgaaactcttgcaagt
tcagacagttttgcttctactcagcccactcattcatggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggacagtgttatgaagcggagatcgaggagatagatgaagaa
aacggcactgctgcgatcacctttgctggctacggcaatgctgaagtgaccccactgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaacaaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacagagaataaaagaacttgagcaggaaagagaggaccagaaggttaaatggcaacag
ttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaaaaggagtatttttgct
tcacctgagagtgtaaccggaaaagttggagtaggaacttgtggaattgctgataaacct
atgacacaatatcaagatacctctaaatacaatgtcaggcatttgatgcctcaataa

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