KEGG   Ailuropoda melanoleuca (giant panda): 100468407
Entry
100468407         CDS       T01329                                 
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04141  Protein processing in endoplasmic reticulum
aml04210  Apoptosis
aml04217  Necroptosis
aml04218  Cellular senescence
aml04382  Cornified envelope formation
aml05010  Alzheimer disease
aml05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100468407 (CAPN1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    100468407 (CAPN1)
   04217 Necroptosis
    100468407 (CAPN1)
   04218 Cellular senescence
    100468407 (CAPN1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    100468407 (CAPN1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100468407 (CAPN1)
   05022 Pathways of neurodegeneration - multiple diseases
    100468407 (CAPN1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:aml01002]
    100468407 (CAPN1)
Enzymes [BR:aml01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     100468407 (CAPN1)
Peptidases and inhibitors [BR:aml01002]
 Cysteine peptidases
  Family C2: calpain family
   100468407 (CAPN1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 100468407
NCBI-ProteinID: XP_002916692
Ensembl: ENSAMEG00000017629
UniProt: G1MH21
LinkDB
Position
16:83946883..83973765
AA seq 715 aa
MAEEIITPVYCTGVSAQVQKQRAKELGLGRHENAIKYMGQDYEQLRAHCLQSGALFRDEA
FPPVPQSLGYKDLGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTLLHRVVPHGQSFQNGYAGIFHFQLWQFGEWVDVVVDDLLPIKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWYELRKAPSDLYQIILK
ALERGSLLGCSIDISSVLDMEAVTFKKLVKGHAYSVTGAKQVNYQGQMVSLIRMRNPWGE
VEWTGAWSDGSSEWNSVDPYEREQLRVKMEDGEFWMSFRDFMREFTRLEICNLTPDALKS
RSIRKWNTTLYEGTWRRGSTAGGCRNYPATFWVNPQFKIRLEETDDADDDYGGRESGCSF
VLALMQKHRRRERRFGRDMETIGFAVYEVPPELVGQSAVHLKRDFFLANSSRARSEQFIN
LREVSTRFRLPPGEYVVVPSTFEPNKEGDFVLRFFSEKSAGTQELDDQIQANLPDEQVLS
EEEIDENFKALFRQLAGEDMEISVKELQTILNRIISKHKDLRTKGFSLESCRSMVNLMDR
DGNGKLGLVEFNILWNRIRNYLSIFRKFDLDKSGSMSAYEMRMAIESAGFKLNKKLYELI
ITRYSEPDLAVDFDNFVCCLVRLETMFRFFKTLDTDLDGVVTFDLFKWLQLTMFA
NT seq 2148 nt   +upstreamnt  +downstreamnt
atggctgaggagatcatcacccccgtgtactgcacgggggtgtccgcacaagtgcagaag
cagcgggccaaggagctgggccttggccgccatgaaaacgccatcaagtacatgggccag
gactatgagcagctgcgggctcattgcctgcagagtggggccctcttccgtgatgaggct
ttccccccggtgccccagagcctaggctacaaggacctgggccccaactcctccaaaacc
tatggcatcaagtggaaacgtcccacggagctgctctcaaacccccagttcattgtggat
ggagccacccgcacagacatctgccagggagcactgggggactgttggctcctggctgcc
attgcctccctcaccctcaatgacacgcttctgcatcgagtggtaccacacggccaaagc
ttccagaatggctatgccggcatcttccatttccagctgtggcagtttggggaatgggtg
gacgtggtcgtggatgacctgctgcccatcaaggacgggaagctggtgtttgtgcactcc
gcccaaggcaatgagttctggagtgccctgctcgagaaggcctatgccaaggtgaatggc
agctacgaggccctctctgggggcagtacttcagagggcttcgaggacttcacaggcggg
gtcactgagtggtatgagctgcgcaaggcacccagcgacctctaccaaatcatcctcaag
gccctggagcgggggtccctcctgggctgctccattgacatctccagcgttctggatatg
gaggccgtcaccttcaagaagctggtgaagggccatgcctactctgtgacaggggccaag
caggtgaactaccagggccagatggtgagcctgatccggatgcggaatccctggggcgag
gtggagtggacgggagcctggagtgacggctcctcggagtggaacagtgtggacccttac
gagcgggagcagctccgggtcaagatggaggatggagagttctggatgtccttccgagac
ttcatgcgtgagttcacccgcctggagatctgcaacctgacgcccgatgcgctcaagagc
cggtcgatccgcaaatggaacaccacactctatgaggggacctggcggcgggggagcacc
gcgggcggctgcaggaactacccagccaccttctgggtcaatccccagttcaagatccgg
ctggaggagaccgatgatgcggacgacgactacgggggtcgcgagtcaggctgcagcttc
gttctagccctcatgcagaagcaccgtcgccgggagcgccgctttggccgcgacatggag
accattggcttcgccgtctacgaggtccctccggagctggtgggccagtcggccgtgcac
ctgaagcgggacttcttcctggctaactcgtcgcgggcgcgctcggagcagttcatcaac
ctgcgtgaggtcagcacgcgcttccgcttgccgcccggggagtacgtggtggtgccctcc
actttcgagcccaacaaggagggggacttcgtgctgcgtttcttctccgagaagagcgcc
gggacccaggagctggatgaccagatccaggccaatctccccgatgagcaagtgctctca
gaagaggagatcgacgagaacttcaaggccctcttcaggcagctggccggggaggacatg
gagatcagcgtcaaggagctgcagaccatcctgaacaggatcatcagcaaacacaaggat
ctgcgtaccaagggcttcagcctggagtcgtgccgcagcatggtgaatctcatggaccgg
gacggcaacgggaagctgggcctggtggagttcaacatcctgtggaaccggatccggaat
tacctgtccatcttccggaagttcgacttggacaagtcgggcagcatgagtgcgtacgag
atgcggatggccatcgagtctgcaggcttcaagctcaacaagaagctctatgagctcatc
atcacccgctactcggagccggacctggccgtggacttcgacaacttcgtgtgttgcctg
gtgcggctggagaccatgttccggtttttcaaaactctggacacagatctggatggcgtc
gtgacctttgacttgtttaagtggttacagctgaccatgtttgcatga

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