Ailuropoda melanoleuca (giant panda): 100472996
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Entry
100472996 CDS
T01329
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100472996 (PHF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100472996 (PHF1)
03036 Chromosome and associated proteins [BR:
aml03036
]
100472996 (PHF1)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100472996 (PHF1)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
100472996 (PHF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_2
Prok-RING_1
PHD_ash2p_like
Chromo
DUF4537
ASH2L-like_WH
Zn_ribbon_CLPX_N
Motif
Other DBs
NCBI-GeneID:
100472996
NCBI-ProteinID:
XP_034516443
Ensembl:
ENSAMEG00000001427
UniProt:
D2GYZ4
LinkDB
All DBs
Position
5:28577962..28583062
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AA seq
567 aa
AA seq
DB search
MAQPPRLSRSGAPPLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARIPPPVEPLTGDGAPTSFPSGQGPGGG
VSRPLGKRRRPEPEPLRRRQKGKMEELGPPSAVRNQPEPQEQRERARLQRALQASVSPPP
PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDGEPPDRSPLELHIG
FPTDIPKSVPHSMTASSSSVPAPSPGLPRRSAPSSPLCRSLSPGTGGGVRGGVGYLSRGD
PVRVLARRVRPDGSVQYLVEWGGGGIF
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcccccccggctgagccgctctggtgcccccccactttgggacccagcctcc
cctgctcccacctcaggccccaggcctcggctttgggagggtcaagatgtgctggccagg
tggacggatgggctgctatacttggggaccatcaagaaggtggacagtgctcgggaggtc
tgtctggtccagtttgaggatgattcccagtttctggttctatggaaagacattagcccc
gctgccctccccggggaggaacttctctgctgtgtctgtcgctctgagactgtggtccct
gggaaccggctggtcagctgtgagaagtgccgccacgcttatcaccaggactgccatgtt
ccaagggccccagcccctggagaaggagagggcacatcctgggtctgccgccagtgtgtc
ttcgccattgccaccaagagggggggtgcactgaagaagggcccctatgcccgggccatg
ctgggcatgaagctgtcactgccatatggactaaaggggctagactgggacgctggacat
ctgagcaaccggcagcagagctactgttactgtggtggccctggggagtggaacctgaaa
atgctgcagtgccggagctgcctgcagtggttccatgaggcctgcacccagtgtctgagc
aagcccctcctctacggggacaggttctatgagttcgaatgctgtgtgtgtcgggggggc
cctgagaaggtcaggaggctgcagcttcgctgggtggatgtggcccatcttgtcctctat
cacctcagcgtttgctgtaagaaaaaatactttgattttgaccgtgagatcctccccttc
acttctgagaattgggacagtttgctcctcggcgagctctcagacactcccaagggagaa
cgttcttccaaactcctctctgctctcaacagccacaaggaccgtttcatttcagggagg
gagattaagaagaggaaatgcttgtttggtctccatgctcggatccctccccctgtggag
ccccttactggagatggagcccccaccagcttcccttcagggcagggccctgggggaggg
gtctcacgtcccctggggaagcgccggaggccggagccagagcccctgaggaggaggcag
aaggggaaaatggaggagctggggccaccctcagcagtgcgcaatcagcccgagccccag
gagcaaagggagcgggctcgtctgcagagggcactgcaggcctcagtgtctccaccaccc
cccagccctaaccagagttaccagggcagcagcggctacaacttccggcccacagacgcc
cgctgcctgcccagcagtcccatccggatgttcgcttccttccacccctctgccagcacc
gcagggacctctggggatggtgaacccccagacaggtcacccctggaacttcacattggt
ttccccacagacatccctaaaagtgtcccccactcgatgactgcctcatcttcctcagtc
ccagccccctccccaggtcttcctagacgctcagcaccctcttctcccctgtgccgtagt
ttgtctcctgggactgggggaggagtccgaggtggggttggctacctgtcccgaggggac
cctgttcgggtccttgctcggagagtacggcctgatggttctgtgcagtacctggttgag
tggggaggtgggggcatcttctga
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