KEGG   Ailuropoda melanoleuca (giant panda): 100483422
Entry
100483422         CDS       T01329                                 
Symbol
CHAF1B
Name
(RefSeq) chromatin assembly factor 1 subunit B isoform X1
  KO
K10751  chromatin assembly factor 1 subunit B
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100483422 (CHAF1B)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     100483422 (CHAF1B)
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 CAF-1_p60_C WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd NBCH_WD40 B-prop_COPA_B_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd eIF2A Beta-prop_SCAP Beta-prop_EML Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_ELP1_1st WDR90_beta-prop_4th Ge1_WD40 RMC1_N Beta-prop_Nup120_160 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 100483422
NCBI-ProteinID: XP_034511577
Ensembl: ENSAMEG00000005560
LinkDB
Position
1:complement(8365286..8382567)
AA seq 548 aa
MKVITCEIAWHNKEPVYSLDFQHGAAGRIHRLASAGVDTAVRIWKVEKGPDGKAIVEFLS
NLARHTKAVNVVRFSPNGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWT
VVKTLRGHLEDVYDICWAADGNLMASASVDNTAIIWDVSKGQKLSIFNEHKSYVQGVTWD
PLGQYIATLSCDRVLRVYSTQKKRVAFNVSKMLSGIGSEGEARSYRMFHDDSMKSFFRRL
SFTPDGSLLLTPAGCVESGENVTNTTYVFSRKNLKRPIAHLPCPGKATLAVRCCPVYFEL
RPVVETAGGPSPEPAAELVRLPYRLVFAVASEDSVLLYDTQQPFPFGYVSHIHYHTLSDV
SWSSDGAFLAISSTDGYCSFVTFEKDELGIPLKEKPVLSVRTPDTAKKTKNQPYQGSSPG
PRLAEGTPTGRIQDPSSPCTPPPQARPSPTPVAPSEEKAALQPSTQNPRAPPSRRVTLNT
LQAWSKTTPRRINLIPLKTNTSPNSAPTSVISTEEGQPEMPRDPQGSPPELKRPRLGEHE
ASTQGLDP
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgaaagtcattacttgcgaaatcgcctggcacaacaaggagccggtgtacagcctggac
ttccagcatggcgcggctggcaggatccacagactggcgtcggcgggcgtggacaccgcg
gttcggatctggaaggtggaaaaaggacccgatggaaaggccattgttgaatttttgtcc
aatcttgctcgccataccaaagctgtcaatgtcgtgcgtttttctccaaatggggaaatt
ttagcgtcaggaggagatgatgctgtcattctgttgtggaaggtgaacgacaacaaggag
ccagaacagatcgcttttcaggacgaggatgaggctcagctgaataaggagaattggact
gtcgtaaaaaccctgcggggccacttagaagatgtgtatgatatttgctgggcagccgac
gggaatttgatggcttctgcctctgtggataacacggccatcatatgggacgtcagtaaa
ggacaaaagctctccatctttaatgaacataaaagttatgtccaaggagtaacctgggac
cccttgggtcagtatattgctaccctgagctgtgacagggtcctgagggtgtacagcacc
cagaagaaacgtgtggcttttaatgtctcaaaaatgctgtctggcatagggtccgaagga
gaggcaagaagttaccggatgtttcatgatgacagcatgaagtcattctttcgtagactt
agttttactcctgatggatctttgctcctcacaccagctggatgtgtggaatctggcgaa
aacgtgacaaatacaacttatgttttctccaggaaaaatcttaaaaggcctatcgctcat
ctgccctgtcctggcaaagcgacgcttgctgtccgctgctgtcccgtctactttgagttg
aggcccgtggtggaaacagcaggcggaccctcgccggagccggccgcggagctggtgcgc
ctgccctaccgcctggtgttcgccgtggcgtcggaagactcggtgctcttgtacgacacc
cagcagcccttcccgttcggctacgtgtctcacatacactaccacacgctgagtgacgtg
tcctggtccagcgacggggccttcctggccatttcttccacggacggctactgttcattt
gtgacgtttgagaaggatgaacttggaatacctttgaaagagaagccggttctaagtgtg
agaactcctgacacagcaaagaaaacgaagaatcagccataccagggatcttcgccggga
cccaggctggccgaggggacccctactggcagaatccaagaccccagcagtccttgcaca
cccccacctcaggcgagaccatctccaaccccagtggccccttccgaggagaaggcggcc
ctgcagcctagcactcaaaacccgagagcacccccgtcccggagggtcaccctgaataca
ctgcaggcctggagcaagacaacaccccggaggattaacttaatacctttaaagaccaat
acttcaccgaattctgcaccaaccagtgtgatttccacggaggaaggtcagccagagatg
cccagagacccgcagggcagtcctccggagctcaagcggcctcgacttggtgaacacgaa
gcaagtacccaaggtctggacccttga

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