Ailuropoda melanoleuca (giant panda): 100484632
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Entry
100484632 CDS
T01329
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100484632 (LHX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100484632 (LHX5)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
100484632 (LHX5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
100484632
NCBI-ProteinID:
XP_034495566
Ensembl:
ENSAMEG00000008592
UniProt:
G1LPS4
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All DBs
Position
12:complement(10190939..10199515)
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
LHPLPGEVFSGGPSPPFPMSGASGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggctgcgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgcgttcagtgctgcgagtgtaagaccaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgacttcttcaggcgcttc
ggcacgaagtgtgcgggctgcgcacaaggcatctcgcccagcgacctggtgcgcaaggcc
cgcagtaaagtcttccacctcaactgtttcacctgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctacgtcatcgacgagaacaagttcgtgtgcaaggacgactacctg
agctcctccagcctcaaggagggcagcctcaactcagtgtcgtcctgtacggaccgcagt
ttgtccccagacctccaggacccgctccaggacgaccccaaagagacggacaactcgacg
tcgtcggacaaggagacagccaacaacgagaacgaggagcagaactccggcacgaagcgg
cgcggcccgcgcaccaccatcaaagccaagcagctggagacgctcaaggccgcctttgcc
gccacgcccaagcccacgcgccacatccgcgaacagctggcgcaggagaccggcctcaac
atgcgcgttatccaggtgtggttccagaaccgaaggtccaaagaacgcaggatgaaacag
ctgagcgcactcggagcccggagacacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttggggtccactccgtacacctactacgga
gactaccaaggcgactactacgcgcccggaggcaactatgacttcttcgcgcacggcccg
ccgtcgcaggcgcagtcgccggccgactcgagcttcctggccgcgtcggggcccggctcg
acgccgctgggcgcgctggagccgccgctggccggcccgcacgccgccgacaaccccagg
ttcaccgacatgatctcgcacccggacacgccgagccccgagcccggcctgccgggcgcg
ctgcaccccctgcccggcgaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggagccagcggctacagcggacccctgtcgcaccccaaccccgagctcaacgaggccgcc
gtgtggtaa
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