KEGG   Ailuropoda melanoleuca (giant panda): 100484632
Entry
100484632         CDS       T01329                                 
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
  KO
K18493  LIM homeobox protein 5
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:aml00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100484632 (LHX5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aml03000]
    100484632 (LHX5)
Transcription factors [BR:aml03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain LIM
    100484632 (LHX5)
SSDB
Motif
Pfam: LIM Homeodomain Homeobox_KN Prok-RING_1 Orbi_VP3
Other DBs
NCBI-GeneID: 100484632
NCBI-ProteinID: XP_034495566
Ensembl: ENSAMEG00000008592
UniProt: G1LPS4
LinkDB
Position
12:complement(10190939..10199515)
AA seq 402 aa
MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
LHPLPGEVFSGGPSPPFPMSGASGYSGPLSHPNPELNEAAVW
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgatggtgcactgtgccggctgcgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgcgttcagtgctgcgagtgtaagaccaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgacttcttcaggcgcttc
ggcacgaagtgtgcgggctgcgcacaaggcatctcgcccagcgacctggtgcgcaaggcc
cgcagtaaagtcttccacctcaactgtttcacctgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctacgtcatcgacgagaacaagttcgtgtgcaaggacgactacctg
agctcctccagcctcaaggagggcagcctcaactcagtgtcgtcctgtacggaccgcagt
ttgtccccagacctccaggacccgctccaggacgaccccaaagagacggacaactcgacg
tcgtcggacaaggagacagccaacaacgagaacgaggagcagaactccggcacgaagcgg
cgcggcccgcgcaccaccatcaaagccaagcagctggagacgctcaaggccgcctttgcc
gccacgcccaagcccacgcgccacatccgcgaacagctggcgcaggagaccggcctcaac
atgcgcgttatccaggtgtggttccagaaccgaaggtccaaagaacgcaggatgaaacag
ctgagcgcactcggagcccggagacacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttggggtccactccgtacacctactacgga
gactaccaaggcgactactacgcgcccggaggcaactatgacttcttcgcgcacggcccg
ccgtcgcaggcgcagtcgccggccgactcgagcttcctggccgcgtcggggcccggctcg
acgccgctgggcgcgctggagccgccgctggccggcccgcacgccgccgacaaccccagg
ttcaccgacatgatctcgcacccggacacgccgagccccgagcccggcctgccgggcgcg
ctgcaccccctgcccggcgaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggagccagcggctacagcggacccctgtcgcaccccaaccccgagctcaacgaggccgcc
gtgtggtaa

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