Amycolatopsis mediterranei S699: RAM_04340
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Entry
RAM_04340 CDS
T01822
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn00020
Citrate cycle (TCA cycle)
amn00190
Oxidative phosphorylation
amn00650
Butanoate metabolism
amn00720
Other carbon fixation pathways
amn01100
Metabolic pathways
amn01110
Biosynthesis of secondary metabolites
amn01120
Microbial metabolism in diverse environments
amn01200
Carbon metabolism
Module
amn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amn_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RAM_04340 (sdhA)
00650 Butanoate metabolism
RAM_04340 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RAM_04340 (sdhA)
00720 Other carbon fixation pathways
RAM_04340 (sdhA)
Enzymes [BR:
amn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RAM_04340 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
Pyr_redox_2
DAO
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AEK39360
UniProt:
A0A9R0U6C3
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All DBs
Position
complement(906845..908599)
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AA seq
584 aa
AA seq
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MQFHKYDVVIVGAGGAGMRAAIESGQRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTIKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAAVRRACYAADRTGHMILQTLYQNCVKYGTEFFNEFYVLDLVTTPDEDGNPVASG
VVAYELATGELHVFQAKSIVFATGGAGKIFKTTSNAHTLTGDGLGIIFRKGLPLEDMEFF
QFHPTGLAGLGILISEAVRGEGGILRNASGERFMERYAPTIKDLAPRDIVARSMVQEVLQ
GRGCGPNKDYVVLDVTHIPEETLNAKLPDIMEFSRTYLGVDPVKEPVPVFPTCHYVMGGI
PTNIHGEALRDNENVIPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGRRAGIAAAEYAL
AHEHVELPADPTKLVEEQLAGLLSEHGDERVADIRKEMQQTMDSHASVYRTEDTLKQALT
DVQALKERYQRITVSDKGKRYNTDLLEAVELGFLLELAEVLVVGALARKESRGGHAREDY
PTRDDTNFMRHTMAYKQGAGLSSDIRLDYKPVTFTRYEPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccacaagtacgacgtggtgatcgtcggcgccggcggcgccgggatgcgcgcg
gccatcgagtccggccagcgcgcccgcaccgcggtcctcaccaagctctacccgacccgg
tcccacaccggcgcggcccagggcggcatgtgcgccgcgctggcgaacgtcgaagaggac
aactgggagtggcacaccttcgacacgatcaagggcggcgactacctggtcgaccaggac
gccgccgagatcatggcgaaggaggccatcgacgcggtcctcgacctcgagaagatgggc
ctgccgttcaaccgcacgcccgagggcaagatcgaccagcgccgcttcggcggccacacg
cgtgaccacggcaaggccgcggtccgccgcgcctgctacgccgccgaccgcactggccac
atgatcctgcagacgctgtaccagaactgcgtcaagtacggcacggagttcttcaacgag
ttctatgtgctcgacctcgtcaccacgccggacgaggacggcaacccggtcgcttccggc
gttgtcgcctacgagctggccaccggcgagctgcacgtcttccaggcgaagtccatcgtg
ttcgccaccggcggcgcgggcaagatcttcaagacgacgtcgaacgcgcacaccctcacc
ggtgacggcctcggcatcatcttccgcaagggcctcccgctcgaggacatggagttcttc
cagttccacccgaccggcctcgcgggcctgggcatcctgatctcggaagccgtccgcggc
gagggcgggatcctgcgcaacgcctccggcgagcggttcatggagcgctacgcccccacc
atcaaggacctcgcgccgcgcgacatcgtcgcccgctcgatggtgcaggaagtgctgcag
ggccgcgggtgcgggccgaacaaggactacgtcgtcctggacgtcacgcacatccccgag
gagacgctgaacgcgaagctcccggacatcatggagttctcccggacctacctgggcgtc
gacccggtgaaggagccggtgccggtcttcccgacctgccactacgtgatgggcggcatt
ccgaccaacatccacggcgaagcgttgcgggacaacgagaacgtcattcctggcctgtac
gccgcgggcgaggtcgcgtgcgtgtccgtgcacggttcgaaccggctcggcacgaactcg
ctgctcgacatcaacgtgttcggccgccgcgccggcatcgcggccgcggagtacgcgctg
gcgcacgagcacgtcgagctgcctgcggatcccacgaagctggtggaagagcagctcgcg
ggcctgctgtcggagcacggcgacgagcgcgtcgccgacatccgcaaggaaatgcagcag
acgatggactcgcacgcttcggtgtaccggaccgaggacacgctgaagcaggcgctgacc
gacgtccaggcgctcaaggagcggtaccagcggatcaccgtgtcggacaagggcaagcgg
tacaacaccgacctgctcgaggccgtcgagctcggcttcctgctggagctggccgaggtc
ctggtcgtgggcgcgctggcgcgcaaggagtcccgcggcggccacgcccgcgaggactac
cccacccgcgacgacacgaacttcatgcgccacaccatggcctacaagcagggcgcgggg
ctgtcctcggacatccggctcgactacaagcccgtgaccttcacccgctacgaaccgatg
gagcggaagtactga
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