Amycolatopsis mongoliensis: QRX60_08060
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Entry
QRX60_08060 CDS
T09938
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
amog
Amycolatopsis mongoliensis
Pathway
amog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QRX60_08060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amog03021
]
QRX60_08060
03400 DNA repair and recombination proteins [BR:
amog03400
]
QRX60_08060
Enzymes [BR:
amog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QRX60_08060
Transcription machinery [BR:
amog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QRX60_08060
DNA repair and recombination proteins [BR:
amog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QRX60_08060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Peptidase_M23
TrbE
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
WIY03796
UniProt:
A0A9Y2NFI8
LinkDB
All DBs
Position
complement(1699700..1703203)
Genome browser
AA seq
1167 aa
AA seq
DB search
MAVSPANQATAATTSAESRSESTGIPGAPKRVSFAKIREPLNTPNLLDVQIQSFQWFTGD
EAWFERRVEEGEENPVGGLEEVLNEISPIEDFSGSMSLSFSAPRFDEVKASIEECKDKDM
TYAAPLFVTAEFVNNNTGEIKSQTVFLGDFPVMTDKGTFIINGTERVVVSQLVRSPGVYY
SKDVDKTTDKDVFSVRVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEA
IRERFSFSETLLATLEKDHTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKAKRYD
LAKVGRYKVNKKLGLDTPYDTGTLTEEDIVTTIEYLVRLHAGEDKMDAQNGTEIPVETDD
IDHFGNRRLRTVGELIQNQIRVGLSRTERVVRERMTTQDVEAITPQTLINIRPIGAAIKE
FFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGMEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLCSYARVNPFGFIETPYRKVVEGRVTDQVDYLTADEEDRYVKAQANAPIS
DDGTFVEDRVMARRKGGEVELIDPLDIDYMDVSPRQMVSVATAMIPFLEHDDANRALMGA
NMQRQAVPLLRNQAPYVGTGVELRAAVDAGDVLVAEQSGVVEELSADLITIMHDDGTRKS
YGLYKFRRSNHGTCFNHRPIVNEGDRVEQGQVIADGPSTENGEMALGKNLLVAVMPWEGH
NYEDAIILSERLVQDDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVLADLDERGI
IRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIG
IRVFSREDDDELPPGVNELVRVYVAQKRKIQPGDKLAGRHGNKGVIGKILPVEDMPFMED
GTPVDIILNTHGVPRRMNIGQILELHLGWLASQGWTIEGTPDWAKNLSPELYDVAPNTNT
ATPVFDGAKEEELTGLLGATKPNRDGERMVKENGKATLLDGRSGEPYPYPVAVGYMYILK
LHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIK
SDDVVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDSDD
EDLERAAANLGINLSRNESPSVDDVVH
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctctcccgcgaaccaggccactgctgcgaccacctcggctgaatctcgctcg
gagtccacgggaatccccggcgcgcccaagcgggtttccttcgcaaagattcgcgaaccg
ctcaacacccccaacctgctcgatgtccagatccagtcgttccagtggttcaccggggac
gaagcgtggttcgagcgccgtgtcgaagaaggtgaagaaaacccggtcggcggcctcgaa
gaggtcctgaacgagatctccccgatcgaggacttctccggctcgatgtccctgtccttc
tccgccccgcgcttcgacgaggtcaaggcctcgatcgaggagtgcaaggacaaggacatg
acgtacgcggccccgctgttcgtcacggcggagttcgtcaacaacaacacgggcgagatc
aagagccagacggtcttcctgggcgacttcccggtcatgaccgacaagggcacgttcatc
atcaacggcaccgagcgtgtcgtcgtgtcccagctggtccgctcgccgggcgtctactac
tcgaaggacgtcgacaagacgaccgacaaggacgtcttcagcgtccgcgtgatcccgagc
cgcggcgcgtggctcgagttcgacgtcgacaagcgcgacaccgtcggcgtccgcatcgac
cgcaagcgccgccagccggtcaccgtgctgctgaaggccctgggctggaccaccgaggcg
atccgcgagcgcttctccttctcggagacgctgctggccaccctcgagaaggaccacacc
gcgggcaccgacgaggcgctgctcgacatctaccgcaagctgcgcccgggcgagccgccc
acgaaggagagcgcgcagaccctgctggagaacctgttcttcaaggcgaagcgctacgac
ctggccaaggtcggccggtacaaggtcaacaagaagctgggcctcgacacgccgtacgac
acggggacgctgaccgaagaggacatcgtcaccaccatcgagtacctggtccggctgcac
gccggcgaggacaagatggacgcgcagaacggcaccgagatcccggtcgagaccgacgac
atcgaccacttcggcaaccggcgcctgcgcacggtcggcgagctgatccagaaccagatc
cgggtcggcctgtcccgcaccgagcgtgtcgtgcgtgagcgcatgaccacgcaggacgtc
gaggcgatcaccccgcagaccctgatcaacatccgcccgatcggcgcggcgatcaaggag
ttcttcggcacctcgcagctgtcgcagttcatggaccagaacaacccgctgtcgggcctg
acgcacaagcgtcgtctgtcggccctcggcccgggtggtctgtcccgtgagcgcgccggc
atggaggtccgggacgtccacccgtcgcactacggccggatgtgcccgatcgagacgccg
gaaggtccgaacatcggcctgatcggctcgctctgctcctacgcgcgggtcaacccgttc
ggcttcatcgagacgccgtaccgcaaggtcgtcgagggccgggtcaccgaccaggtcgac
tacctgaccgcggacgaagaggaccggtacgtcaaggcccaggccaacgcgccgatctcc
gacgacggcaccttcgtggaagaccgggtcatggcccgccgcaagggtggcgaagtcgag
ctgatcgacccgctcgacatcgactacatggacgtctcgccgcggcagatggtctcggtc
gcgacggcgatgatcccgttcctcgagcacgacgacgcgaaccgcgccctgatgggtgcg
aacatgcagcgccaggccgtgccgctgctccgcaaccaggcgccgtacgtcggcaccggg
gtggagctgcgcgccgcggtcgacgccggtgacgtgctcgtcgccgagcagtccggtgtc
gtcgaggagctctcggcggacctgatcacgatcatgcacgacgacggcacgcggaagagc
tacggactgtacaagttccgccgctccaaccacggcacctgcttcaaccaccgcccgatc
gtcaacgagggcgaccgggtcgagcagggtcaggtcatcgccgacggcccgtccaccgag
aacggtgagatggcgctcggcaagaacctgctcgtcgcggtcatgccgtgggagggccac
aactacgaggacgcgatcatcctctccgagcgcctggtgcaggacgacgtcttgacgtcg
atccacatcgaggagcacgagatcgacgcccgcgacaccaagctgggcgccgaggagatc
acccgggacatcccgaacgtctccgaggaggtcctggccgacctcgacgaacgcggcatc
atccgcatcggcgccgaggtccgcgacggcgacatcctggtcggcaaggtcacgccgaag
ggcgagaccgagctgacgccggaagagcgcctgctccgcgcgatcttcggcgagaaggcc
cgcgaagtccgcgacacctcgctgaaggtgccgcacggcgagaccggcaaggtcatcggc
atccgcgtgttctcgcgcgaggacgacgacgagctgcccccgggcgtcaacgagctggtc
cgcgtctacgtggcccagaagcgcaagatccagccgggcgacaagctcgccggccggcac
gggaacaagggtgtcatcggcaagatcctgccggtcgaggacatgccgttcatggaggac
ggcacgcccgtcgacatcatcctgaacacccacggtgtgccgcgacggatgaacatcggc
cagatcctcgagctgcacctgggctggctggcctcgcagggctggacgatcgaaggcacc
ccggactgggcgaagaacctgtccccggagctctacgacgtcgcgccgaacacgaacacc
gcgaccccggtgttcgacggcgcgaaggaagaggagctcaccgggctgctcggggcgacc
aagccgaaccgcgacggcgagcgcatggtcaaggagaacggcaaggcgaccctgctggac
ggccgctccggcgagccgtacccgtacccggtcgcggtcggctacatgtacatcctgaag
ctgcaccacctggtcgacgacaagatccacgcccgctccaccggtccgtactcgatgatc
acgcagcagccgctgggtggtaaggcgcagttcggtggccagcgcttcggtgagatggag
tgctgggcgatgcaggcgtacggcgctgcctacacgctgcaggagctgctgacgatcaag
tcggacgacgtggtcggccgcgtcaaggtgtacgaggccatcgtcaagggggagaacatc
cccgagccgggcatcccggagtcgttcaaggtgctcctcaaggagctccagtcgctgtgc
ctcaacgtcgaggtgctctccagcgacggcgcggcgatcgagatgcgcgactccgacgac
gaggacctcgagcgcgccgcggcgaacctcggcatcaacctgtcccgcaacgagtcgccc
tcggtggacgacgtcgtgcactga
DBGET
integrated database retrieval system
