Amycolatopsis mongoliensis: QRX60_36335
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Entry
QRX60_36335 CDS
T09938
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
amog
Amycolatopsis mongoliensis
Pathway
amog00040
Pentose and glucuronate interconversions
amog01100
Metabolic pathways
amog02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QRX60_36335
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QRX60_36335
Enzymes [BR:
amog01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
QRX60_36335
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WIX99483
UniProt:
A0A9Y2JLF6
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All DBs
Position
7549987..7550964
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AA seq
325 aa
AA seq
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MTRKTEFCLRVFGTAALAAAMAVAVPAGVAHAAFESSPAGFGAGTTGGAGGETVTVTTAS
AFTSAVADAVARTVRVSGKITLANKTLVKIGSNKTILGVGSGSGFTGGGLAVDKSSNVII
RNLAISKAVGTDAIQIQRGATRVWVDHNDLSSDLDHGKDYYDGLLDISHAADGITVSWNK
FHDHYKVSLVGHSDSNAAEDTGKLHVTYSHNWFENVNSRLPSLRFGTGHAYDNYFHAVTD
SAVHSRMNAQFLAQNNVFESTKVCLETTGDSDVDGYLNESGNSFGGCTNEITRTGSMTNA
PYSFTLEPTSTVKATVTAGAGVGRI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggaaaaccgagttctgcctgcgtgttttcggaaccgccgcgctcgccgcggcg
atggccgtcgccgttcccgccggggtcgcgcacgcggccttcgagagttcccccgccggc
ttcggcgccggcacgaccggcggcgcgggcggcgagaccgtcaccgtgacgacggcttcg
gcgttcaccagcgcggtggcggacgcggtcgcccgcacggtccgggtgagcgggaagatc
accctggcgaacaagacgctggtgaagatcgggtcgaacaagacgatcctcggcgtcgga
tcgggctccggcttcaccggcggcgggctcgccgtggacaagtcgtcgaacgtgatcatc
cgcaacctggccatctcgaaggcggtcggcaccgacgcgatccagatccagcgcggcgcc
acccgggtgtgggtcgaccacaacgacctgtcctccgacctcgaccacggcaaggactac
tacgacggcctgctcgacatcagccacgccgccgacgggatcacggtgtcctggaacaag
ttccacgaccactacaaggtctccctcgtcgggcacagcgacagcaacgccgccgaggac
accggcaagctgcacgtcacctacagccacaactggttcgagaacgtgaactcgcggctg
ccgagcctgcggttcggcaccggccacgcctacgacaactatttccacgcggtcaccgat
tccgccgtgcattcgcggatgaacgcgcagttcctcgcccagaacaatgtcttcgaatcc
acgaaggtgtgcctcgaaaccaccggtgacagcgacgtcgacggctacctcaacgaatcg
ggcaactccttcggcggctgcacgaacgagatcacccgcaccgggagcatgacgaatgca
ccgtattccttcacgctggagccgacttccacggtcaaggccaccgtgacggcgggcgcg
ggtgtcggccggatctga
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