Malaciobacter molluscorum: AMOL_2306
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Entry
AMOL_2306 CDS
T06655
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
amol
Malaciobacter molluscorum
Pathway
amol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMOL_2306 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amol03021
]
AMOL_2306 (rpoB)
03400 DNA repair and recombination proteins [BR:
amol03400
]
AMOL_2306 (rpoB)
Enzymes [BR:
amol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMOL_2306 (rpoB)
Transcription machinery [BR:
amol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMOL_2306 (rpoB)
DNA repair and recombination proteins [BR:
amol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMOL_2306 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF2664
Motif
Other DBs
NCBI-ProteinID:
AXX93258
UniProt:
A0A2G1DEY6
LinkDB
All DBs
Position
complement(2301847..2305992)
Genome browser
AA seq
1381 aa
AA seq
DB search
MLNSLKSGNRLRVDFAKNPQQIEIPNLLQLQQNSYENFLMIGKEERDDAGIEKVFKSVFP
IHDSQNRVTLEYLSSEVGKPKYDVRESMVRGLTYSIPLKINIRLTLWELDEKTGEKIGVK
DMKEQSLFIREIPLMTDRTSFIVNGVERVVVNQLHRSPGVIFKEEETNTSGNKLIYTGQI
IPDRGSWLYFEYDAKDVLYVRINKRRKVPVTILFRALGYSKEDIIKLFYPVLNIKVKNNK
FLTTFNPDDYAGRLDFDLKDDKGNLILAAGKRLTARKAKALVEGGLDLVEYPIELLMDRY
TANTIFDPESGEVLFDALTNLDELKLKKLLDLGFDSFDIANDLATGVDDSIINAFKADAE
SLKLLKQTEQIDDENDLSAIRIYKVMRPGEPVTKEAAKEFVRKLFFDPERYDLTKVGRMK
MNHKLGVTVPEYVTVLTYEDIIKTVQYLVKVKSGHGHIDDRDHLGNRRIRAIGELLANEL
HSGLIKMQKAIRDKMTTLSGTLEDLMPHDLVNSKMITSTITEFFTSGQLSQFMDQTNPLS
EVTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSTYAKVN
DLGFIEAPYKKVKDGVVTNEIIYMTATLEEGLVIAPGSTKVDENGKIIEPLIEARQDGEI
LLIEKNKVDYIDISSQMVMGVAASLIPFLEHDDANRALMGSNMMRQAVPLLRPNAPIVGT
GLEKTVARDAWEAIKAKRAGIVEKADAKNVYIRGEDESGAFIDHYEINKNVRTNNNTSFG
QRIAIKAGDKIEKGQVIADGPSMDNGELAVGVNAMVAFMPWNGYNYEDAIVLSQRLIKED
AFTSVHIYEKEVECRELKHGNEEITRDLPGVKEESISHLDASGIVKIGTHVKSGMILVGK
VTPKGEIKPTPEERLLRAIFGEKAGHVINKSLYCPTSMEGIVVDVKVFTKKGYEKDERAV
AEIEAEKNELDVKHHDKLLMLDREEILKINDLLSKSSLDKDVEVDGTTYKKGDHIPLDVL
SNVNRFAMKKVVASYNRDVQNEYNNIKEHFIKQKSTLREEHEEKLQVLEHDDILPSGVIK
QVKVYVATKRKIKVGDKMAGRHGNKGIVSNIVPQVDMPYLEDGTTVDVILNPLGVPSRMN
IGQILEVHLGLAGRRLGLQIQDIFDAKKAEFITELREKMTEIASVAKLMKAKEFMDSLTD
DELIDYAQDWAKGVRFATQVFDGVKEDEFKKLFELAKIDSDGKSTLYDGKTGQKMKERVN
VGYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGATNV
LKEMLTTKSDDVEGRTRAYRAIANGENVPSSGVPETFFVLTKELKALGLDVDIFDEVEEN
E
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgttaaactctttaaaatctggtaatagacttagagttgattttgcaaaaaatccacaa
caaatagaaattccaaatctactacaattacaacaaaactcatatgaaaattttctaatg
attggaaaagaagagagagatgatgctggtattgaaaaagtattcaaatctgtttttcct
attcatgactcacaaaatagagttactttagaatatttaagttcggaagttgggaaacct
aaatatgacgttagagagtcaatggtaagaggtcttacatactctattcctttaaaaatc
aatattagattgactttatgggaacttgatgagaagactggtgagaaaattggtgttaaa
gatatgaaagaacaatctttattcatcagagaaatcccattaatgactgatagaacatcg
tttatagttaatggtgttgaaagagttgttgtaaaccaattacatagatctccaggtgtt
atcttcaaagaagaagagacaaatacttcaggtaacaaactaatttatactggtcaaatt
attccagatagaggttcttggttatattttgaatatgatgctaaagatgtattatatgta
agaattaataaaagaagaaaagttcctgtaacaattttatttagagcattaggatactca
aaagaagatattatcaaacttttttatccagttttaaatattaaagtaaaaaataataaa
tttttaacaacatttaatccagatgattatgctggaagattagactttgatttaaaagat
gataagggtaatcttattttagctgctggaaaaagacttacagcaagaaaagcgaaagct
ttagttgagggtggtcttgatttagttgaatatccaattgaattattaatggatagatat
actgcaaatacaatttttgatccagaatctggtgaagtattatttgatgcacttactaat
ttagatgaattgaaattaaaaaaacttttagatttaggttttgattcttttgatattgca
aacgatttagctacaggtgttgatgattctattatcaatgcatttaaagctgatgctgaa
agtttaaaactattaaaacaaacagaacaaattgatgatgaaaatgatttatcagcaatt
agaatttataaagtaatgagaccaggtgaacctgtaacaaaagaagctgctaaagagttt
gttagaaaattattctttgatccagaaagatatgacctaacaaaagttggtagaatgaaa
atgaaccataaacttggtgtaacagttcctgaatatgtaacagtattaacttatgaagat
ataattaaaactgtacaatatttagtaaaagttaaatcaggtcatggtcatattgatgat
agagatcacttaggtaacagaagaattagagcaattggtgaattacttgcaaatgagtta
cattctggacttattaaaatgcaaaaagcaattagagataaaatgactacattaagtgga
acattagaagatttaatgccacatgatttagttaactctaaaatgattacatcaacaatt
acagagttttttacatcaggtcaattgtctcaatttatggaccaaactaacccattatca
gaagttactcataaaagaagactttctgcacttggagaaggtggtttagtaaaagaaaga
gcaggatttgaagtaagggacgttcacccaactcactatggtagaatctgtcctgttgaa
actccagagggtcaaaatattggtcttatcaatactttatcaacatatgctaaagtaaat
gatttaggatttattgaagctccatataaaaaagttaaagatggtgttgtaacaaatgaa
atcatttatatgacagcaactttagaagagggattagtaattgctcctggatcaacaaaa
gttgatgaaaatggaaaaattattgagccattaattgaagctagacaagatggtgaaatt
ttacttattgaaaagaataaagtagattatattgatatttcttcgcaaatggttatgggt
gttgctgcatcacttattcctttcttagaacatgatgatgccaacagagcacttatggga
tcaaatatgatgagacaagctgttccattattaagaccaaatgctccaattgttggtaca
ggattagaaaaaacagtagcaagagatgcgtgggaagcaattaaagcaaaaagagctggt
attgttgaaaaagctgatgctaaaaatgtttatattagaggtgaagatgaaagcggtgct
tttattgatcactatgaaataaacaaaaatgttagaactaataataatacatcttttggg
caaagaattgcaattaaagctggagataaaatagaaaaaggtcaagtaattgctgatgga
ccttctatggataacggtgagttagctgttggtgttaatgcaatggttgcatttatgcct
tggaatggttataactatgaagatgcaattgtattatctcaaagattaattaaagaagat
gcatttacttctgttcatatttatgaaaaagaagttgaatgtagagaacttaaacatggt
aatgaagaaatcacaagagatttaccaggtgtaaaagaagaatcaatttctcatcttgat
gcatcaggtattgttaaaatcggtactcatgttaaatcaggaatgattcttgttggtaaa
gttactccaaaaggtgaaattaaaccaactccagaagagagactattaagagcaattttt
ggtgaaaaagctggtcatgttattaataaatctttatactgcccaacatcaatggaaggt
attgtagtagatgtaaaagtatttactaaaaaaggttatgaaaaagatgaaagagctgtt
gcagaaattgaagcagagaaaaatgaacttgatgtaaaacatcatgataaattattaatg
ttagatagagaagaaattcttaaaattaatgatttattatcaaaatcttcattagataaa
gatgttgaagttgatggtacaacttataaaaaaggtgatcatattcctttagatgtactt
tcaaatgtaaatagatttgcaatgaaaaaagtagtagcttcttataatagagatgttcaa
aatgaatataataatattaaagagcattttattaaacaaaaatctactttaagagaagag
catgaagagaaacttcaagttctagaacatgatgatattttaccaagtggtgtaattaaa
caagttaaagtttatgtagcaactaagagaaaaatcaaagttggggataaaatggcagga
cgtcacggtaacaaaggtatcgtttctaacatcgttcctcaagttgatatgccttattta
gaagatggaacaacagttgatgttattcttaacccacttggagttccttcaaggatgaat
attgggcaaatcttagaagttcacttaggattagcaggtagaagacttggtcttcaaatt
caagatatttttgatgctaaaaaagcagaatttataactgaacttagagaaaaaatgact
gagattgcttcagttgcaaaattaatgaaagcaaaagagtttatggactctttaacagat
gatgaacttatagattatgcacaagactgggcaaaaggtgtaagatttgcaacacaagta
tttgatggtgtaaaagaagatgaatttaaaaaattatttgaattagcgaaaattgattca
gatggtaagtctacattatatgatggtaagactggtcaaaaaatgaaagagagagttaac
gtaggttatatgtatatgcttaaacttcaccacttagttgatgaaaaagtacacgcaaga
tctactggaccttattctcttgtaacacaacaaccagttggtggtaaagcactatttggt
ggacaaagatttggggaaatggaagtttgggcactagaagcatatggtgcaacaaatgta
ttaaaagagatgcttacaacaaaatcagatgatgttgaaggtagaacaagagcttataga
gcaatagcaaatggtgaaaatgttcctagttcaggtgttcctgaaacattcttcgtatta
actaaagagcttaaagctttaggtttagacgttgatatttttgacgaggtagaagagaat
gagtaa
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integrated database retrieval system
