Amycolatopsis methanolica: AMETH_1474
Help
Entry
AMETH_1474 CDS
T03230
Name
(GenBank) carbohydrate ABC transporter
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
amq
Amycolatopsis methanolica
Pathway
amq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AMETH_1474
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amq02000
]
AMETH_1474
Transporters [BR:
amq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AMETH_1474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_30
AAA_22
AAA_16
AAA
AAA_23
RsgA_GTPase
ABC_membrane_2
TsaE
AAA_33
AAA_25
MMR_HSR1
NB-ARC
T2SSE
AAA_29
DO-GTPase2
DUF87
ABC_ATPase
NACHT
cobW
nSTAND3
AAA_5
AAA_24
AAA_19
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AIJ21566
UniProt:
A0A076MRL8
LinkDB
All DBs
Position
1501090..1503012
Genome browser
AA seq
640 aa
AA seq
DB search
MTRPGFPGAPAGPVRKPKSFGEGARRLMGRLRPERLTLVFVVALGVASVAFTVVGPKILG
HATDIIFGGFVSRRLPAGTTTEQAIAAARAEGNTNLADMLARMDVVPGAGIDFAALGRVL
SWVLVLYVAASVFGWLQGYLLNGAVQRVVYRLRADVEAKLHRLPLRYFDGQPRGELLSRV
TNDIDNIALTLQQALSQLLTSLLSLIGVLVMMFVVSPLLAVIALLVVPASIVLTRAIGKR
SQKLFVAQWKHTGALNAHIEEAFSGHELVTVFGRRREVEQEFGRRNADLYRAGMGAQFIS
GIIMPAMMFLSNLSYVVLAVVGGLRVATGTMTLGDVQAFLQYSRQFTQPLTQAASLANLL
QSGVASAERVFELLDAAEQEPDTASPVLPERRRGRVEFEHVDFSYDPQRPLIEDLSLVAE
PGQTVAIVGPTGAGKTTLVNLIMRFYELDAGRITLDGVDITAMTRDDLRGQTGMVLQDTW
LFNGTIRDNIAYGNPSATPEQVEAAARATFVDRFVRSLPDGYDTVIDDEGTNLSAGEKQL
VTIARAFLADPSLLILDEATSSVDTRTEALLQQAMAALRTDRTSFVIAHRLSTIRDADLI
LVMESGRIVEQGTHEELLDAGGAYYRLYSAQFRSPVEAAT
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagaccaggtttcccgggcgctcccgccgggccggtgcggaagccgaagagcttc
ggcgagggcgcccgccgcctgatgggccggctgcgcccggaacggctcacgctcgtgttc
gtggtcgcgctgggggtcgcgagcgtcgcgttcaccgtggtggggccgaagatcctcggt
cacgccaccgacatcatcttcggcgggttcgtctcccgccgcctgcccgcgggcaccacc
accgagcaggcgatcgcggcggcccgggcggagggcaacaccaacctcgccgacatgctc
gcgaggatggacgtggtgccgggcgccggcatcgacttcgccgccctaggccgggtgctg
tcctgggtgctggtgctgtacgtggcggcgtcggtgttcggctggctgcagggttacctg
ctcaacggcgccgtgcagcgcgtggtgtaccggctgcgtgcggacgtcgaggcgaagctg
caccggttgccgttgcggtacttcgacggtcagccgcgcggggaactgctgtcccgcgtc
acgaacgacatcgacaacatcgcgctgacgctgcagcaggccctgagccagctgctcacg
tcgctgctgtcgctgatcggcgtgctggtgatgatgttcgtggtgtcgccgctgctcgcg
gtgatcgcgttgctggtggtgcccgcgtcgatcgtgctgaccagggcgatcgggaagcgt
tcgcagaagctgttcgtggcgcagtggaagcacaccggcgccctcaacgcgcacattgag
gaggcgttcagcgggcacgagctggtcacggtgttcggccggcgtcgcgaggtggagcag
gagttcgggcgccgcaacgccgacctctaccgggcgggcatgggcgcgcagttcatctcc
gggatcatcatgccggcgatgatgttcctgtcgaacctcagctacgtcgtgctggccgtc
gtcggcgggctgcgggtcgcgacggggacgatgacgctcggcgacgtgcaggcgttcctg
cagtactcgcgccagttcacccagccgctgacccaggccgcgtcgctggcgaacctgctg
cagtccggcgtcgcctccgccgagcgggttttcgagctgctcgacgcggcggagcaggag
ccggacaccgcgtccccggtcctgccggagcggcgacggggccgggtggagttcgagcac
gtggacttctcctacgacccgcagcggccgctcatcgaggacctgtcgctggtcgcggag
ccggggcagacggtggcgatcgtcgggccgaccggggccggcaagaccacgttggtgaac
ctgatcatgcggttctacgagctggacgccgggcggatcacgctcgacggcgtggacatc
accgcgatgacccgcgacgacctgcgcggccagaccggcatggtgctgcaggacacctgg
ctgttcaacggcacgatccgggacaacatcgcctacggcaacccgtcggcgacgccggag
caggtggaggcggccgcgcgggccacgttcgtcgaccggttcgtgcgcagcctgcccgac
ggctacgacacggtgatcgacgacgagggcaccaacctcagcgcgggggagaagcagctg
gtgacgatcgcgcgggcgttcctcgccgacccgtcgctgctgatcctcgacgaggccacc
agctcggtcgacacccgcaccgaggcgctgctgcagcaggccatggcggcgctgcgcacc
gaccggacgtccttcgtgatcgcgcaccgcctgtccacgatccgcgacgccgacctcatc
ctggtgatggagtcggggcggatcgtggagcagggcacgcacgaggagctgctcgacgcg
ggcggcgcctactaccggctgtactcggcgcagttccgcagcccggtggaggcggcgacc
tga
DBGET
integrated database retrieval system
