Amycolatopsis methanolica: AMETH_6098
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Entry
AMETH_6098 CDS
T03230
Symbol
ssfR
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
amq
Amycolatopsis methanolica
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amq03000
]
AMETH_6098 (ssfR)
Transcription factors [BR:
amq03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AMETH_6098 (ssfR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
Dimerisation
HTH_20
MarR_2
TrmB
MarR
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AIJ26190
UniProt:
A0A076N5U7
LinkDB
All DBs
Position
6294850..6295593
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AA seq
247 aa
AA seq
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MAGAPTLIGSVQRALHLLDAVGASERPATAKFLARALDLPLPTTYHLLRTLVHEGYLRKL
DDGYVLGNRVDALGQRNTVQAVVSRARPALQSLRDELRGATYLSLYQDGEIKLIDVADGP
SMPSVDLWVGVHEVGHATAFGKCILSCLDKPGRDDYLSRYKLADLTPHTVTDPRVLEQRL
RLNRGVVADREEYLLGTACVAAPVRAPGLIGAVAISAPVRRYPALMADPGALSRAANRVA
RAVALRA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgcccccaccctgatcggttccgttcagcgcgcactgcacctgctggacgcg
gtcggtgcgagcgagcgcccggcgacggcgaagttcctcgcccgcgccctcgacctgccg
ctgcccaccacgtaccacctgcttcggacccttgtccacgaaggctacctgcgcaaactc
gacgacgggtacgtcctgggcaaccgggtggacgcgctcggccagcggaacacggtgcag
gcggtggtcagcagggcgaggcccgccctgcagtcgctgcgggacgagttgcgcggcgcc
acctacctctcgctctaccaggacggtgagatcaagctgatcgacgtcgcggacgggccg
agtatgccgtccgtcgatctgtgggtcggcgtgcacgaagtggggcacgcgacggcgttc
ggcaagtgcattctgtcctgtttggacaagccgggccgggacgactacctatcgaggtac
aagctggccgacctcaccccgcacaccgtcaccgatcccagggtgctcgagcagcggctg
cggctgaacaggggcgtggtggccgatcgcgaggagtacctgctcggcaccgcgtgcgtc
gccgcgccggtgcgggcgcccggcctgatcggcgcggtcgcgatctcggcgccggtccgc
aggtacccggcgctgatggccgatcccggcgcgctgagccgggccgcgaaccgggtcgcc
cgcgccgtcgcgctgcgggcctag
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