Anopheles marshallii: 128714495
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Entry
128714495 CDS
T10928
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
amrs Anopheles marshallii
Pathway
amrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128714495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amrs03019
]
128714495
Enzymes [BR:
amrs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
128714495
Messenger RNA biogenesis [BR:
amrs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128714495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
Motif
Other DBs
NCBI-GeneID:
128714495
NCBI-ProteinID:
XP_053665344
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All DBs
Position
3:81704126..81706370
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AA seq
613 aa
AA seq
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MDITKKNFIEQLPLIRETIRDATFFAMDCEFTGLASDRTIFPFDTPEEVYLKMVENSPHY
IIVQFGLCAFRVEPPAEDNKDAEPRVSYKCFNFFCYPKGRGNVFSCQGESMRFLADNGFD
FNRLFREGLAYANESEEQRYRADLKERQATRAATILAAAEEESNEADPKAAKMSDVNAIP
VPTELQQQVYDTAASIEEFLQSDRPELIVGNCNAFQRKLIYQMIEQRYIRKVSTSTVSLE
NNQKAIKVERKRSYEEEQALDEQRRAQENEDLELNVGISLVLQELSKARKLIVGHNMLLD
LFYVLRQFFKPLPVDYQEFKKLAKEYFPLLLDTKYLCTNAEIKVDVNSSVLAHVYDAVSK
APFSIPTVHAELPDHQYSVEDEKKHEAGYDAYLTGLCFLGLASRFKVNLLQLSKDNTLRH
YMNRIFITRLNDVNYIYLNGKEPSQTRDHIFYVTFPESWRTSDIQSKFKPFGPVHVSWLD
HTSAFVSLHNRIAASSVLKTIGYHTGFKVYSFAQFTQMKLQRPGTKRGRIGSGSSSSGNG
AGVRCAQPVDQSSREEKAEEESQTIDHTVPAVKRKGKHEDQPPPAVNEANADDSGGWKTV
KKARKTFTDNNDW
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggatattaccaagaagaatttcatcgagcaacttccactgattcgggaaacaatccgg
gatgctacgttttttgcaatggattgtgaattcaccggactggcctccgatcgtaccata
ttcccgtttgatacaccggaagaagtgtatttgaagatggtcgaaaatagcccacattac
attatcgtacagttcgggctgtgtgcctttcgtgttgaaccaccggcagaggacaataag
gacgccgagccacgcgtatcgtacaaatgtttcaactttttctgctatcccaagggccgc
gggaacgtgttcagttgccaaggtgaaagtatgcgctttctcgccgacaatgggttcgat
tttaatcgactgtttcgcgaaggacttgcgtatgcaaacgaaagcgaagagcaacggtac
agagctgacttgaaggagcgtcaagcaacgagggcagccacaatactggcggcggctgag
gaagagtcgaatgaagccgatcccaaggcagcaaaaatgtcagacgtcaatgcaattcca
gttcctacagaacttcagcaacaagtgtatgataccgctgccagtatcgaggagtttcta
cagtctgaccggccggaactgatcgtcggtaactgtaatgcattccaacggaagctcatc
tatcagatgatagaacagcgctacattcgtaaggtgtccacctccaccgtatcgctggag
aacaatcagaaggcgattaaagtggaacggaaacgttcgtacgaagaggaacaggcattg
gatgagcagcgtcgggcgcaagagaatgaggatctcgagttgaacgttggaatatctctg
gttctgcaggagttgtcgaaggcccgcaaattgatcgttggtcacaatatgttgctcgat
ttgttctacgtgcttcggcaattctttaagcctctaccggtagactatcaagaatttaag
aagctcgcgaaagaatatttcccgcttctcctcgacactaaatatctgtgcacgaacgct
gaaatcaaggtggacgttaattcgtccgtattggcgcacgtgtatgacgcggttagcaag
gcaccattttccattcccacggtacatgccgagcttcctgaccatcagtacagtgtagaa
gatgagaaaaagcacgaagctggttatgatgcgtaccttaccgggctttgctttctaggg
cttgccagtcggttcaaggttaatctgttgcaactttccaaggacaacacgttgaggcat
tacatgaatcgaattttcatcactcgcctaaatgatgttaactacatttatctgaacgga
aaagagccctcacaaacacgggatcacattttttacgttaccttcccggaaagctggcga
accagtgacatccagagcaagtttaaaccgttcggaccggtacatgtcagctggctggac
catacttccgcattcgtgtcgttacacaatcgcatcgcagcgagttcggtgctgaaaacg
atcggatatcacaccggcttcaaagtttacagctttgcgcagtttacgcaaatgaaactg
caacgccctggtactaaacgaggacgaatcggttcgggtagttctagcagcggaaatggt
gctggagttcgatgcgcacaaccagtcgatcaatcgagccgggaagaaaaagcagaagaa
gaaagccaaacaatagaccacactgtacccgccgttaagcggaagggcaagcatgaggat
caaccgccaccggcagtcaacgaagccaacgcagacgacagcggtgggtggaaaactgtt
aaaaaggctcgcaaaacgttcaccgacaacaatgattggtga
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